Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq131719 154 1e-32 seq15021 82.4 6e-11 >seq131719 Length=2163 Score = 154 bits (170), Expect = 1e-32 Identities = 333/493 (68%), Gaps = 4/493 (1%) Strand=Plus/Minus Query 36353 TTTGGATTGGCGCCTTTGCCGCCCGGAAATTCCCAATCAATATCGATGCCGTCGAAAAAT 36412 || || || |||||||| || || || || |||||||| ||||||| |||||| || ||| Sbjct 2050 TTGGGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAAT 1991 Query 36413 TTCCATGTCAACACAAATTCACGCACGGATTCGACAAAAATTTGTCGCGTTCGCGCATC- 36471 ||||| ||| | || || ||||| | || ||| | ||| || | || Sbjct 1990 TTCCAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTGTCTTGTCA 1931 Query 36472 GTGCATATGATAGAAGGGATCGGACAGTGTCCAACCGCCGATTGATGCCAACACTTTTAG 36531 ||| | | | |||| ||||| | || ||||| ||||||| || | ||| | || || Sbjct 1930 GTGAAGAAAA-AGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTGAG 1872 Query 36532 ATTGGGATTGGCCAATTTTGCTGCCATTAATTGACCAAAATTGCCTTTGTAGGGTTCGTT 36591 | || | ||| ||| ||| | ||| || || || |||||||| |||||||| Sbjct 1871 GTCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTT 1812 Query 36592 CCATGCGCTAACGCCTGTTTGTGGTTTTTGGAGCGCCGCCCACGGATCGTGTATGGAAAC 36651 ||||| || ||| |||||||||| || || || ||||| || || || ||||| || Sbjct 1811 CCATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACAC 1752 Query 36652 TTTAAAATTGTCCCTGCCAGCGCACGATCTTTGCAACGCTTCAAAACTCCCCGTGATAGA 36711 ||| || | || | ||| ||| || | || | || | ||||| ||| || Sbjct 1751 TTTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATCTC 1692 Query 36712 TTTTAAACTGTCGTTTATACCGTCACCGCCGCAAATCGGTATAAATCCGTATAAAATGTG 36771 || | ||||||||| || ||||| || ||||| ||||| || || ||||| || | ||| Sbjct 1691 CTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAGTG 1632 Query 36772 CGAAAGGTTCGGCGTGGGCACTTTGTCCACGGGAAAAGATCGACCG-TAAACGCCCCATT 36830 | || || || | ||||| ||||||||| || || | | || || ||||||| Sbjct 1631 AGTCAGATTGGGGATCGGCACGCGGTCCACGGG-GAACTTCCTCGGATACACTCCCCATT 1573 Query 36831 CGACAAAATAGGC 36843 | || || || || Sbjct 1572 CTACGAAGTAAGC 1560 >seq15021 Length=1916 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||||||||| || |||||| |||| || || || || ||| | || || || | | Sbjct 728 ATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGGCTTCC 787 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | |||||| ||| || | || ||| | ||||| || | || ||| || Sbjct 788 GACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCTCCTGATCAA 847 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||| || || | ||| || |||||| ||||||| | || | ||||||| Sbjct 848 CAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCTGATTACAAT 907 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTA 25044 || |||||||| | || ||||| || |||||| Sbjct 908 ATTCAGAAAGAATCTACTCTTCACTTGGTGTTA 940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417044453060960