Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq168888 630 6e-176
seq67196 138 1e-27
seq159217 104 2e-17
>seq168888
Length=4095
Score = 630 bits (698), Expect = 6e-176
Identities = 1212/1777 (68%), Gaps = 21/1777 (1%)
Strand=Plus/Minus
Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165
|| || |||||||||||||| || || || || || || || | | ||||||||||||
Sbjct 3213 TTATCAACTGTAAACTGTATAGCATTAGCAGCTGGCTTTGTTCTCAAATAATACATGCCG 3154
Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG- 22224
|| || |||||||| ||||| || ||||| || ||||| || ||||| || ||| | ||
Sbjct 3153 GTTTTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTTACCGTAATTTGGT 3094
Query 22225 -CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283
|| | |||| | || || |||||||| || || ||||| || || | |||||| |
Sbjct 3093 TCAGCTACATGAATG--TTAAAAGACTGACTTTGGTCAATAAATGCACCCCTATCGGCAG 3036
Query 22284 CCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343
|||| | || || | |||| ||||| || ||||| || || | || || |
Sbjct 3035 CCATTTGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAGATCTCTTATTT 2976
Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403
|| ||| || | ||| || | || | ||||| ||||||||||| || | |||||| |
Sbjct 2975 CTTTCGGAATAGCTTCTATATTTTGTATTGACCCATTATTGTGTATTATAAGATTTTTCA 2916
Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463
| || | ||||||| | | || ||||| | | |||| | || || ||||
Sbjct 2915 TGTCTTCATCCCACAAATCTGCTTCAGTTAAATCACGCAATAAATGATGATTTACAACTT 2856
Query 22464 GAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523
| |||||||| ||||| || | | |||||| || || |||||||| ||||| || ||||
Sbjct 2855 GGAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAGGTTCAAATGATT 2796
Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583
||||||| || || || ||||| || || || || ||||| || || || | || || |
Sbjct 2795 CATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAATAATAAAGAAT 2736
Query 22584 TTCTCAAGCCGTGCTTTGAAATT-TTACTCTTGA-GCATCGACCAGTCCCACAGATCGGA 22641
||||||| || ||||| |||||| || || || | ||||| ||||| ||| || ||||
Sbjct 2735 TTCTCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATC--CCAGTTCCAAAGGTCGGT 2678
Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701
|| || ||| |||||| |||||||| || | || |||| | ||||| |||||
Sbjct 2677 GGGGGTT---TTGCTCCACATGTCGTATTGTAATATACCTTGACTGGATGGGCTTCCTTC 2621
Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761
||| || || || ||||| | | |||||||| || || || || | || |||||
Sbjct 2620 GTAAGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAGTGCCCCGTA 2561
Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAA--TTCGGCGGCGGCGACGCTTTCGTACGGC 22819
||| || || || || |||| ||| | || ||| || | || | ||||| || |
Sbjct 2560 ATAAATGGTTTCAAATATTTG-TTGATTAAGTTTCATCG-CTGCATCACTTTCATATGCA 2503
Query 22820 ATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTT 22879
|| ||||||| || || | || || | || ||||| || || || || || | |
Sbjct 2502 ATGCGCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGGCCTATGC 2443
Query 22880 TTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTC 22939
||| ||| || | ||||||| || | ||||| |||| ||| || || | ||
Sbjct 2442 CTCATATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGATTTTATTT 2383
Query 22940 AAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGAT 22999
|||||| || | |||||| || | | ||| | || | | ||
Sbjct 2382 AAGTTTTGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAAT--TATATGTTTTAT 2325
Query 23000 TGTAC--AACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTT 23057
| ||||||| |||| | || || || || | ||| || || || || |||||
Sbjct 2324 CTTCATTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTTCGTCAG 2265
Query 23058 TGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGC 23117
|||||||| || || || || || |||| || ||||| ||||| ||||| || ||
Sbjct 2264 CTGACGTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTAAGTTCT 2205
Query 23118 TCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177
| ||||| ||||| | || || | || ||||| ||||| || || || ||||| || |
Sbjct 2204 TTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCGTTTCAA 2145
Query 23178 CCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTGC 23237
| || | ||||| || ||| ||| | | || ||| || || ||| | |
Sbjct 2144 CTTGGGCTTCGATTATGGCTTTCCATAAAACTTGGGCGCTGACCTGTTTCACAAAACGCT 2085
Query 23238 CTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGC 23297
||||| ||||| | || || | || ||||| | || ||||||| || | |
Sbjct 2084 TTTCTTTTTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCAACAGTCAGCTAATC 2025
Query 23298 CGGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATA 23356
| || | | ||| |||||||| |||||||| | | |||||||| | | |||||
Sbjct 2024 CAGGACAAT-CATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCAACTCTTTTCATA 1966
Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416
||||||||||||||||||| ||| || |||| || || || || || || ||||||||
Sbjct 1965 AAAAGATCCGGTATCCATAAAGCATAAAACAACTCTCGAGCTCGTACTTCTTCTTTGCCA 1906
Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476
||||||||||| | || | ||| || || | ||| |||||||| ||||| | || ||
Sbjct 1905 GTGTTCTTTTTGAGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGGCTCTAAATACACT 1846
Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536
||||| || || || | ||||| || || ||||| || || | || |||||||||||
Sbjct 1845 GCAAAAGCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGCTGTGTTGTTGTAA 1786
Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCT 23596
|| || ||||| |||||||| ||||| || | || | ||| || | | || |||
Sbjct 1785 ACCCTAAGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGCGATATATGATCCT 1726
Query 23597 TTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCG 23656
|| |||| | ||||||||||| || || || || | ||||| ||||| | |||
Sbjct 1725 TTAGCTCTGATACAGTGAACGTGGACTCCGATTCCACCAGCAGATTTAGATATAAGCGCA 1666
Query 23657 CATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAA 23716
|||||||| | ||| || || || || || || ||||| ||||| | || || | |||
Sbjct 1665 CATTGTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCATAGCTACAAGAAAA 1606
Query 23717 CACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTA 23776
|| || |||| ||| | || || || || |||||||| || ||||||||||| |||
Sbjct 1605 CAAGATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGGGCTGGCGTGTGTA 1546
Query 23777 AAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGT 23836
|| ||| | |||| | |||||| || | ||||| ||||| || || || || ||
Sbjct 1545 AAATATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATCTATATCTTCACCATGG 1486
Query 23837 ATACCGATGGCGACGCGCATCATCATGTATTGAGGTC 23873
||||| || | || | ||||| ||| | || ||||
Sbjct 1485 ATACCAATAGATACTCTCATCAGCATATGCTGTGGTC 1449
>seq67196
Length=1848
Score = 138 bits (152), Expect = 1e-27
Identities = 170/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| || ||| |||| || |||||||||||| | || || ||||| ||
Sbjct 922 ATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTCA 863
Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | | |||| |||| | || | ||| | |||||| ||||| | || || || ||
Sbjct 862 GATACTATCGAGAACGTTAAAGCTAAGATTCA-GGACAAAGAAGGTATCCCCCCAGATCA 804
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || || ||||| || |||||||||||| ||| || ||||| ||
Sbjct 803 GCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTACAA 744
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||||||||| ||| | ||||| || || |||| | || ||||
Sbjct 743 TATTCAAAAAGAATCCACTTTACATCTTGTTCTACGACTTCGCGGAGGTA 694
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || || || |||| || ||||| ||||| | || ||||| || ||
Sbjct 466 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATCACTCTAGAAGTTGAGCCATCT 407
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| |||||| | || ||| |||||||| | ||||| || ||
Sbjct 406 GACACCATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGTATTCCGCCAGATCAA 347
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || || ||||| |||||| | ||||| || | || |||||
Sbjct 346 CAACGTCTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACCCTATCTGACTATAAT 287
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|| ||||||||||| || |||||||||||
Sbjct 286 ATCCAAAAAGAATCCACCCTTCATCTGGT 258
>seq159217
Length=3482
Score = 104 bits (114), Expect = 2e-17
Identities = 125/169 (74%), Gaps = 6/169 (4%)
Strand=Plus/Minus
Query 58320 CATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACA 58379
||||||||||| || || || ||||| |||||||| || || || || || ||||| |||
Sbjct 2980 CATTACAACACAAAGAACCCATTTGACTTTATGAACCTAATTTCTCTGGAAGGCAAAACA 2921
Query 58380 AACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGCGGTAACAAG 58439
||||| || ||||| |||||| | ||||| ||||||| || || ||| | |||
Sbjct 2920 AACTTCTTTGAAAAGAAAGTTGGGGAATACCAAAAATGGGGAGTCATG---GCAAACCCT 2864
Query 58440 TTGGAGGACGATATTTTCACTTTGGATGCTGCCTTTTAATGTGTACAAA 58488
| ||| || | |||||||||||||||| ||||| | | | ||||
Sbjct 2863 CT---TGACAATGTATTCACTTTGGATGCTGAATTTTAGTTTCTTCAAA 2818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444389745198960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |