Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq168888 493 2e-134 >seq168888 Length=4095 Score = 493 bits (546), Expect = 2e-134 Identities = 1164/1742 (67%), Gaps = 36/1742 (2%) Strand=Plus/Minus Query 62084 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 62143 ||| ||||| || ||||| ||||| | |||| | ||||| || || |||| ||| Sbjct 3166 ATAATACATGCCGGTTTTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTT 3107 Query 62144 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 62203 ||| | || || |||| ||| || || | ||| |||||||| || || || || || Sbjct 3106 ACCGTAATTTGGTTCAGCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACC 3047 Query 62204 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAAC 62263 ||| || |||||||||| || | || || | | ||||||| ||| ||||| | Sbjct 3046 CCTATCGGCAGCCATTTGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAG 2987 Query 62264 -TCGCTTAATATCTTCTGGAA--GGTT-TGTATTCTGAATGGATCCACCATCTACCATAA 62319 || |||| | |||| |||| | || | |||| || || || ||| || || | Sbjct 2986 ATCTCTTATT-TCTTTCGGAATAGCTTCTATATTTTGTATTGACCCATTATTGTGTATTA 2928 Query 62320 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 62379 | ||| || || || |||| ||| || | | || |||||| | | | | ||| Sbjct 2927 TAAGATTTTTCATGTCTTCATCCCACAAATCTGCTTCAGTTAAATCACGCAATAAATGAT 2868 Query 62380 GGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 62439 | || || |||||||| || |||||||| ||||| | ||| ||||| || | | Sbjct 2867 GATTTACAACTTGGAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAG 2808 Query 62440 GTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 62499 |||| | || ||||| || || | ||||||||| || ||||| || |||||||| || | Sbjct 2807 GTTCAAATGATTCATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTA 2748 Query 62500 CCAATAAACTATTTCTAAGACCGTATGTTCTGA--TTTTATCTTTTAGATGTTCCCAATT 62557 |||||| |||||| | ||| ||| | || || | ||||||| | ||||| || Sbjct 2747 ATAATAAAGAATTTCTCAAACC--ATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTT 2690 Query 62558 CCAAAGATCCGACGG-----TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTG 62612 |||||| || | || | | || ||||||| ||||| | |||| Sbjct 2689 CCAAAGGTCGGTGGGGGTTTTGCTCCACATGTCG-----TATTGTAATATACCTTGACTG 2635 Query 62613 GCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCC 62672 | |||| | || || ||||| || | ||| || || |||| |||||| || Sbjct 2634 GATGGGCTTCCTTCGTAAGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCT 2575 Query 62673 TCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGG 62732 |||| ||| |||||||||||||||||||| || | | ||| || | ||| | Sbjct 2574 TCTAGTGCCCCGTAATAAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCA 2515 Query 62733 CTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCG 62792 || ||| ||| | | | | ||| | || |||| |||||||||||||| || Sbjct 2514 CTTTCATATGCAATGCGCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCT 2455 Query 62793 ATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCT 62852 ||||| ||||| ||| |||| || || || || || || ||||| |||||| ||| Sbjct 2454 ATAGGCCTATGCCTCATATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCA 2395 Query 62853 ATAATTTTATTGAGATTTCTGAC-AATTACTTTGACCACATCCTTCAGTTTGAGAAAATC 62911 || |||||||| | ||| ||| ||| | |||| || || || | ||| ||||| Sbjct 2394 ATGATTTTATTTAAGTTT-TGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATT 2336 Query 62912 AAATCGCCCATCT--ATTA-CAAACATGTTCAATGCAACAGATGCCAGATTACACACGGC 62968 | || |||| |||| ||||||||||||| |||| |||||| | ||||||||| || Sbjct 2335 ATATGTTTTATCTTCATTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGC 2276 Query 62969 TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGT 63028 || || | ||| || |||| | ||||||||||| | |||||||| || ||||| Sbjct 2275 GACTTCGTCAGCTGACGTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGT 2216 Query 63029 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGT 63088 ||||| || | ||| ||||| || ||||||| || || || ||||| || | || || Sbjct 2215 GCCTAAGTTCTTTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGT 2156 Query 63089 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGC-CT---TTATTA 63144 || ||||||| || | ||| || || |||||||| | ||| | || || | || Sbjct 2155 TCCCGTTTCAACTTGGGCTTCGATTATGGCTTTCCATAAAACTTGGGCGCTGACCTGTTT 2096 Query 63145 TAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCC 63204 | | | | | ||||| |||||||| | ||| | |||||| || ||||||| Sbjct 2095 CACA----AAACGCTTTTCTTTTTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCC 2040 Query 63205 AAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCT 63264 || | | |||| |||||| |||| |||||||| | ||| ||| | | | | Sbjct 2039 AACAGTCAGCTAATCCAGGACAATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTT 1980 Query 63265 TCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTAT 63324 |||| ||||||||| ||||| || ||||| | ||| ||| | |||| | || Sbjct 1979 CAACTCTTTTCATAAAAAGATCCGGTATCCATAAAGCATAAAACAACTCTCGAGCTCGTA 1920 Query 63325 GTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACG 63384 ||| || || || || |||||||| || ||||| || | | ||| || | |||||| | Sbjct 1919 CTTCTTCTTTGCCAGTGTTCTTTTTGAGGTCGAGAAATTCAAAAATGTCTGCATGCCAAG 1860 Query 63385 GTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 63444 | || || || | || | | |||| || ||||| ||||| || ||||||| ||||| | Sbjct 1859 GCTCTAAATACACTGCAAAAGCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTG 1800 Query 63445 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGG 63504 | ||||| || ||||| || | |||||| | | ||||| |||| |||||| || || | Sbjct 1799 CTGTGTTGTTGTAAACCCTAAGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTG 1740 Query 63505 AGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGA--CCTATTCCCCCTGCCAT 63562 |||||| ||| | || | ||| | | | | | || || ||||| || || Sbjct 1739 CGATATATGATCCTTTAGCTCTGATA-CAGTGAACG-TGGACTCCGATTCCACCAGCAGA 1682 Query 63563 TTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGAT 63622 |||||| || | || ||| ||||||| || ||||| || ||||| || || ||||| | Sbjct 1681 TTTAGATATAAGCGCACATTGTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTT 1622 Query 63623 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGT 63682 ||| | |||||||| |||| ||| | || | || | || || | ||| Sbjct 1621 CATAGCTACAAGAAAACAAGATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGT 1562 Query 63683 AGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTC 63742 || ||||| ||||| |||||||||| || | |||||| || | || || | || Sbjct 1561 TGGGCTGGCGTGTGTAAAATATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATC 1502 Query 63743 TATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 63802 |||||| ||| || || | | || | ||| | ||| ||||| |||| |||| | Sbjct 1501 TATATCTTCACCATGGATACCAATAGATACTCTCATCAGCATATGCTGTGGTCGTTCAGC 1442 Query 63803 AA 63804 || Sbjct 1441 AA 1440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627872542178640