Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq168888 592 2e-164
>seq168888
Length=4095
Score = 592 bits (656), Expect = 2e-164
Identities = 1215/1783 (68%), Gaps = 40/1783 (2%)
Strand=Plus/Minus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
|||||||| || | ||||| ||| | || | |||||||||| ||||||||| || |||
Sbjct 3210 TCAACTGTAAACTGTATAGCATTAGCAGCTGGCTTTGTTCTCAAATAATACATGCCGGTT 3151
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
|| || |||| | |||| | ||||| || || || | ||| |||| | || | |
Sbjct 3150 TTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTTACCGTAATTTGGTTCA 3091
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969
||| || || | | || |||||||| || ||||| ||||| || ||||| ||||||
Sbjct 3090 GCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACCCCTATCGGCAGCCATT 3031
Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029
| | || ||| ||| | ||||||||| || ||||||| | | |||| | |
Sbjct 3030 TGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAGATCTCTTATTTCTTTC 2971
Query 37030 GGTAAA---TCTAAATGTTGAATAGAACCATTAT---GTAACACAATTGTATTCTTTATG 37083
|| | | |||| || ||| || || ||||||| ||| | || ||| || |||
Sbjct 2970 GGAATAGCTTCTATATTTTGTATTGACCCATTATTGTGTATTATAAG---ATTTTTCATG 2914
Query 37084 TCATTATTCCACATATTTCTACTTA--TTAGTTCTCTCAATAGGTGTGGATTTACAACCT 37141
|| | || ||||| || || ||| ||| || | ||||| || |||||||||| |
Sbjct 2913 TCTTCATCCCACAAAT--CTGCTTCAGTTAAATCACGCAATAAATGATGATTTACAACTT 2856
Query 37142 GAAAATCTCCAGATAATACTCTTCTT--GTATATATATTGCTAGTATATGGTTCAATGGA 37199
| || || ||||| || ||||||||| |||||||| ||| | || | ||||||| ||
Sbjct 2855 GGAACTCGCCAGACAAAACTCTTCTTTGGTATATAT-TTGAT-GTGAAAGGTTCAAATGA 2798
Query 37200 CTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCT 37259
||||| |||| | ||||||| || ||||| || ||||| || |||| || |
Sbjct 2797 TTCATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAATAATAAAGA 2738
Query 37260 ATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGT 37319
||||||||| ||||| || |||||| | ||||| ||| ||| | ||| | || ||
Sbjct 2737 ATTTCTCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTTCCAAAGGTCGGT 2678
Query 37320 TGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTA-T 37378
||| | || |||||| || ||||||| ||||||| ||| | ||| | || || |
Sbjct 2677 GGGGGTTTTGCTCCACATGTCGTATTGTAATATACCTTGACTGGATGG-GCTTCCTTCGT 2619
Query 37379 ATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAAT 37438
| || |||||| || || ||| || ||||| ||||||| ||||||||| | ||||
Sbjct 2618 AAGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAGTGCCCCGTAAT 2559
Query 37439 ATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGC 37498
| || ||||| || |||||| ||| | | | | ||| | || || || ||||| ||
Sbjct 2558 AAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTTCATATGCAATGC 2499
Query 37499 CCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCT 37558
|| || | ||| ||| || | || |||||||| || ||||| || ||||| ||
Sbjct 2498 GCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGGCCTATGCCTCA 2439
Query 37559 TATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGAT 37618
|||| ||| | | || | ||||| |||| | ||| || |||||||||| |
Sbjct 2438 TATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGATTTTATTTA-AG 2380
Query 37619 TTTTAACTAGTA-TTTTCGTAATTATTCTCAACTTGTCGAACATAAATACGTTATT---A 37674
|||| | || || |||| || | | | | || || | || || || |||| |
Sbjct 2379 TTTTGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATATGTTTTATCTTCA 2320
Query 37675 TTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTA 37734
|||||||| | |||| | ||||||| ||| |||||| || || ||||| || | | |
Sbjct 2319 TTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTTCGTCAGC-TGA 2261
Query 37735 C-TAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTG 37793
| | ||| | ||||| || || | ||||| || | || || || || || ||||
Sbjct 2260 CGTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTAAGTTCTTTTG 2201
Query 37794 ATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTG 37853
|| ||| | ||||||| ||||| || || ||||| || ||||| ||| | |||
Sbjct 2200 GTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCGTTTCAACTTG 2141
Query 37854 AGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTT-----AAttttt 37908
|| ||||| || | |||||||||| | || | || | ||| || ||
Sbjct 2140 GGCTTCGATTATGGCTTTCCATAAAACTTGGGCGCTGAC---CTGTTTCACAAAACGCTT 2084
Query 37909 ttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACA-TCGCATAA 37967
|||||| |||||||| | ||||| || | || |||| ||||| ||| || |||
Sbjct 2083 TTCTTT--TTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCA-ACAGTCAGCTAA 2027
Query 37968 TCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCAT 38027
||| ||||| || |||||||| ||| ||| ||||||| |||||| || | || |||
Sbjct 2026 TCCAGGACAATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCAACTCTTTTCAT 1967
Query 38028 AAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCC 38087
||| | ||| |||| |||||| ||| ||| || ||| | || |||||| || ||
Sbjct 1966 AAAAAGATCCGGTATCCATAAAGCATAAAACAACTCTCGAGCTCGTACTTCTTCTTTGCC 1907
Query 38088 TACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAAT 38147
|||||| | | | ||||| || || || || || ||||| || |||| ||| |
Sbjct 1906 AGTGTTCTTTTTGAGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGGCTCTAAATACAC 1847
Query 38148 CGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATA 38207
| | ||||| || | ||||| || || |||| | |||||| ||||||| || ||
Sbjct 1846 TGCAAAAGCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGCTGTGTTGTTGTA 1787
Query 38208 TATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACC 38267
| || | ||| || || | || |||||| || ||| | || | ||||| | ||
Sbjct 1786 AACCCTAAGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGCGATATATGATCC 1727
Query 38268 CTTAGCTCGTATATTACTTATCGACAA-TCCTATTCCACCTGCATGTTTTGATATTAAAG 38326
||||||| ||| | | | || | ||| |||||||| ||| ||| ||||| | |
Sbjct 1726 TTTAGCTCTGATAC-AGTGAACGTGGACTCCGATTCCACCAGCAGATTTAGATATAAGCG 1668
Query 38327 CGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAA 38386
| ||||||||||| |||||| |||||||||| ||||||||||| || || | || | ||
Sbjct 1667 CACATTGTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCATAGCTACAAGAA 1608
Query 38387 AACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTA 38446
||||| |||| ||| ||| ||| || | || || | || || || |||
Sbjct 1607 AACAAGATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGGGCTGGCGTGTG 1548
Query 38447 TGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGT 38506
| || ||||||| |||| |||| || || | ||| || |||||||||| | || |
Sbjct 1547 TAAAATATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATCTATATCTTCACCAT 1488
Query 38507 GAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549
| ||||| | |||||| ||||| |||||||| ||||||| |||
Sbjct 1487 GGATACCAATAGATACTCTCATCAGCATATGCTGTGGTCGTTC 1445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 467077860716720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |