Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq168888 592 2e-164 >seq168888 Length=4095 Score = 592 bits (656), Expect = 2e-164 Identities = 1215/1783 (68%), Gaps = 40/1783 (2%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 |||||||| || | ||||| ||| | || | |||||||||| ||||||||| || ||| Sbjct 3210 TCAACTGTAAACTGTATAGCATTAGCAGCTGGCTTTGTTCTCAAATAATACATGCCGGTT 3151 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || || |||| | |||| | ||||| || || || | ||| |||| | || | | Sbjct 3150 TTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTTACCGTAATTTGGTTCA 3091 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 ||| || || | | || |||||||| || ||||| ||||| || ||||| |||||| Sbjct 3090 GCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACCCCTATCGGCAGCCATT 3031 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 | | || ||| ||| | ||||||||| || ||||||| | | |||| | | Sbjct 3030 TGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAGATCTCTTATTTCTTTC 2971 Query 37030 GGTAAA---TCTAAATGTTGAATAGAACCATTAT---GTAACACAATTGTATTCTTTATG 37083 || | | |||| || ||| || || ||||||| ||| | || ||| || ||| Sbjct 2970 GGAATAGCTTCTATATTTTGTATTGACCCATTATTGTGTATTATAAG---ATTTTTCATG 2914 Query 37084 TCATTATTCCACATATTTCTACTTA--TTAGTTCTCTCAATAGGTGTGGATTTACAACCT 37141 || | || ||||| || || ||| ||| || | ||||| || |||||||||| | Sbjct 2913 TCTTCATCCCACAAAT--CTGCTTCAGTTAAATCACGCAATAAATGATGATTTACAACTT 2856 Query 37142 GAAAATCTCCAGATAATACTCTTCTT--GTATATATATTGCTAGTATATGGTTCAATGGA 37199 | || || ||||| || ||||||||| |||||||| ||| | || | ||||||| || Sbjct 2855 GGAACTCGCCAGACAAAACTCTTCTTTGGTATATAT-TTGAT-GTGAAAGGTTCAAATGA 2798 Query 37200 CTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCT 37259 ||||| |||| | ||||||| || ||||| || ||||| || |||| || | Sbjct 2797 TTCATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAATAATAAAGA 2738 Query 37260 ATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGT 37319 ||||||||| ||||| || |||||| | ||||| ||| ||| | ||| | || || Sbjct 2737 ATTTCTCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTTCCAAAGGTCGGT 2678 Query 37320 TGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTA-T 37378 ||| | || |||||| || ||||||| ||||||| ||| | ||| | || || | Sbjct 2677 GGGGGTTTTGCTCCACATGTCGTATTGTAATATACCTTGACTGGATGG-GCTTCCTTCGT 2619 Query 37379 ATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAAT 37438 | || |||||| || || ||| || ||||| ||||||| ||||||||| | |||| Sbjct 2618 AAGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAGTGCCCCGTAAT 2559 Query 37439 ATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGC 37498 | || ||||| || |||||| ||| | | | | ||| | || || || ||||| || Sbjct 2558 AAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTTCATATGCAATGC 2499 Query 37499 CCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCT 37558 || || | ||| ||| || | || |||||||| || ||||| || ||||| || Sbjct 2498 GCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGGCCTATGCCTCA 2439 Query 37559 TATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGAT 37618 |||| ||| | | || | ||||| |||| | ||| || |||||||||| | Sbjct 2438 TATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGATTTTATTTA-AG 2380 Query 37619 TTTTAACTAGTA-TTTTCGTAATTATTCTCAACTTGTCGAACATAAATACGTTATT---A 37674 |||| | || || |||| || | | | | || || | || || || |||| | Sbjct 2379 TTTTGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATATGTTTTATCTTCA 2320 Query 37675 TTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTA 37734 |||||||| | |||| | ||||||| ||| |||||| || || ||||| || | | | Sbjct 2319 TTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTTCGTCAGC-TGA 2261 Query 37735 C-TAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTG 37793 | | ||| | ||||| || || | ||||| || | || || || || || |||| Sbjct 2260 CGTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTAAGTTCTTTTG 2201 Query 37794 ATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTG 37853 || ||| | ||||||| ||||| || || ||||| || ||||| ||| | ||| Sbjct 2200 GTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCGTTTCAACTTG 2141 Query 37854 AGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTT-----AAttttt 37908 || ||||| || | |||||||||| | || | || | ||| || || Sbjct 2140 GGCTTCGATTATGGCTTTCCATAAAACTTGGGCGCTGAC---CTGTTTCACAAAACGCTT 2084 Query 37909 ttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACA-TCGCATAA 37967 |||||| |||||||| | ||||| || | || |||| ||||| ||| || ||| Sbjct 2083 TTCTTT--TTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCA-ACAGTCAGCTAA 2027 Query 37968 TCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCAT 38027 ||| ||||| || |||||||| ||| ||| ||||||| |||||| || | || ||| Sbjct 2026 TCCAGGACAATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCAACTCTTTTCAT 1967 Query 38028 AAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCC 38087 ||| | ||| |||| |||||| ||| ||| || ||| | || |||||| || || Sbjct 1966 AAAAAGATCCGGTATCCATAAAGCATAAAACAACTCTCGAGCTCGTACTTCTTCTTTGCC 1907 Query 38088 TACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAAT 38147 |||||| | | | ||||| || || || || || ||||| || |||| ||| | Sbjct 1906 AGTGTTCTTTTTGAGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGGCTCTAAATACAC 1847 Query 38148 CGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATA 38207 | | ||||| || | ||||| || || |||| | |||||| ||||||| || || Sbjct 1846 TGCAAAAGCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGCTGTGTTGTTGTA 1787 Query 38208 TATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACC 38267 | || | ||| || || | || |||||| || ||| | || | ||||| | || Sbjct 1786 AACCCTAAGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGCGATATATGATCC 1727 Query 38268 CTTAGCTCGTATATTACTTATCGACAA-TCCTATTCCACCTGCATGTTTTGATATTAAAG 38326 ||||||| ||| | | | || | ||| |||||||| ||| ||| ||||| | | Sbjct 1726 TTTAGCTCTGATAC-AGTGAACGTGGACTCCGATTCCACCAGCAGATTTAGATATAAGCG 1668 Query 38327 CGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAA 38386 | ||||||||||| |||||| |||||||||| ||||||||||| || || | || | || Sbjct 1667 CACATTGTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCATAGCTACAAGAA 1608 Query 38387 AACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTA 38446 ||||| |||| ||| ||| ||| || | || || | || || || ||| Sbjct 1607 AACAAGATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGGGCTGGCGTGTG 1548 Query 38447 TGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGT 38506 | || ||||||| |||| |||| || || | ||| || |||||||||| | || | Sbjct 1547 TAAAATATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATCTATATCTTCACCAT 1488 Query 38507 GAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 | ||||| | |||||| ||||| |||||||| ||||||| ||| Sbjct 1487 GGATACCAATAGATACTCTCATCAGCATATGCTGTGGTCGTTC 1445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467077860716720