Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq168888 489 2e-133 >seq168888 Length=4095 Score = 489 bits (542), Expect = 2e-133 Identities = 1155/1733 (67%), Gaps = 26/1733 (2%) Strand=Plus/Minus Query 64877 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 64936 ||| ||||| || ||||| ||||| | |||| | ||||| || || |||| ||| Sbjct 3166 ATAATACATGCCGGTTTTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTT 3107 Query 64937 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 64996 ||| | || || |||| ||| || || | ||| |||||||| || || || || || Sbjct 3106 ACCGTAATTTGGTTCAGCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACC 3047 Query 64997 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 65056 ||| || |||||||||| || | || || | | ||||||| ||| ||||| | Sbjct 3046 CCTATCGGCAGCCATTTGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAG 2987 Query 65057 -TCGCTTAATATCTTCTGGAA--GGTT-TGTATTCTGAATGGATCCACCATCTGCCATAA 65112 || |||| | |||| |||| | || | |||| || || || ||| || || | Sbjct 2986 ATCTCTTATT-TCTTTCGGAATAGCTTCTATATTTTGTATTGACCCATTATTGTGTATTA 2928 Query 65113 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 65172 | ||| || || || |||| ||| || | | || |||||| | | | | ||| Sbjct 2927 TAAGATTTTTCATGTCTTCATCCCACAAATCTGCTTCAGTTAAATCACGCAATAAATGAT 2868 Query 65173 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 65232 |||| || ||||| || || |||||||| ||||| | ||| ||||| || | | Sbjct 2867 GATTTACAACTTGGAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAG 2808 Query 65233 GTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 65292 |||| | || ||||| || || | ||||||||| || ||||| || |||||||| || | Sbjct 2807 GTTCAAATGATTCATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTA 2748 Query 65293 CCAATAAACTATTTCTAAGACCGTATGTTCTGA--TTTTATCTTTTAGAGGTTCCCAATT 65350 |||||| |||||| | ||| ||| | || || | ||||||| || ||||| || Sbjct 2747 ATAATAAAGAATTTCTCAAACC--ATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTT 2690 Query 65351 CCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTA 65410 |||||| || | || ||||| ||||| | ||||| Sbjct 2689 CCAAAGGTCGGTGGGGGTTTTGCTCCACATGTCGTATTGTAATATACCTTGACTGGATGG 2630 Query 65411 CGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAA 65470 |||| | || || || || || | ||| || || ||||||||||| || |||| Sbjct 2629 GCTTCCTTCGTAAGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAG 2570 Query 65471 TGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATC 65530 ||| ||||||||||||||||| || || | | ||| || | ||| | || || Sbjct 2569 TGCCCCGTAATAAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTTC 2510 Query 65531 AAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 65590 | ||| | | | | ||| | ||||||| |||||||||||||| || ||||| Sbjct 2509 ATATGCAATGCGCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGG 2450 Query 65591 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 65650 ||||| ||| |||| || || || || || || ||||| |||||| ||| || || Sbjct 2449 CCTATGCCTCATATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGAT 2390 Query 65651 TTTATTGAGATTTCTGAC-AATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC 65709 |||||| | ||| ||| ||| | |||| || || || | ||| ||||| | || Sbjct 2389 TTTATTTAAGTTT-TGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATATG 2331 Query 65710 GCTCATCT--ATTA-CAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCT 65766 | |||| |||| ||||||||||||| |||| |||||| | |||||| || || || | Sbjct 2330 TTTTATCTTCATTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTT 2271 Query 65767 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 65826 | | ||| || |||| | ||||||||||| | |||||||| || || || |||| Sbjct 2270 CGTCAGCTGACGTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTA 2211 Query 65827 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 65886 | || | ||| ||||| || ||||||| || || || ||||| || | || || || | Sbjct 2210 AGTTCTTTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCG 2151 Query 65887 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTA----TTATAGAT 65942 |||||| || | ||| || || |||||||| | ||| | || | | || | | Sbjct 2150 TTTCAACTTGGGCTTCGATTATGGCTTTCCATAAAACTTGGGCGCTGACCTGTTTCACAA 2091 Query 65943 TTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA 66002 | | ||||||| |||||||| || ||| | |||||| || ||||||||| Sbjct 2090 ----AACGCTTTTCTTTTTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCAACAG 2035 Query 66003 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 66062 | | ||||||||||| |||| |||||||| | ||| ||| | | | | ||| Sbjct 2034 TCAGCTAATCCAGGACAATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCAACT 1975 Query 66063 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCC 66122 | ||||||||| ||||| || ||||| | ||| ||| || |||| | || ||| Sbjct 1974 CTTTTCATAAAAAGATCCGGTATCCATAAAGCATAAAACAACTCTCGAGCTCGTACTTCT 1915 Query 66123 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCC 66182 || || || || |||||||| || ||||| || | | ||| || |||||| || || Sbjct 1914 TCTTTGCCAGTGTTCTTTTTGAGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGGCTCT 1855 Query 66183 AAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 66242 || || | || | | |||| || ||||| ||||| || ||||||| ||||| || ||| Sbjct 1854 AAATACACTGCAAAAGCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGCTGTG 1795 Query 66243 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 66302 || || ||||| || | |||||| | | || || ||| |||||| || || | |||| Sbjct 1794 TTGTTGTAAACCCTAAGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGCGATA 1735 Query 66303 TAGCTTCCACTTGCACGAATATTACTAATTGATAGA--CCTATTCCCCCTGCCATTTTAG 66360 || ||| | || | ||| | | | | | || || ||||| || || ||||| Sbjct 1734 TATGATCCTTTAGCTCTGATA-CAGTGAACG-TGGACTCCGATTCCACCAGCAGATTTAG 1677 Query 66361 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 66420 | || | || ||| ||||||| |||||||| || || || ||||| ||||| |||| Sbjct 1676 ATATAAGCGCACATTGTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCATAG 1617 Query 66421 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 66480 | |||||||| |||| ||| | || || | || || | ||| || Sbjct 1616 CTACAAGAAAACAAGATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGGGC 1557 Query 66481 AAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT 66540 ||||| ||||| |||||||||| || | |||||| || | || || | ||||||| Sbjct 1556 TGGCGTGTGTAAAATATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATCTATAT 1497 Query 66541 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 66593 | ||| || || | | || | ||| | ||| ||||| |||| |||| Sbjct 1496 CTTCACCATGGATACCAATAGATACTCTCATCAGCATATGCTGTGGTCGTTCA 1444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656140173168920