Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq168888 489 2e-133
>seq168888
Length=4095
Score = 489 bits (542), Expect = 2e-133
Identities = 1155/1733 (67%), Gaps = 26/1733 (2%)
Strand=Plus/Minus
Query 64877 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 64936
||| ||||| || ||||| ||||| | |||| | ||||| || || |||| |||
Sbjct 3166 ATAATACATGCCGGTTTTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTT 3107
Query 64937 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 64996
||| | || || |||| ||| || || | ||| |||||||| || || || || ||
Sbjct 3106 ACCGTAATTTGGTTCAGCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACC 3047
Query 64997 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 65056
||| || |||||||||| || | || || | | ||||||| ||| ||||| |
Sbjct 3046 CCTATCGGCAGCCATTTGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAG 2987
Query 65057 -TCGCTTAATATCTTCTGGAA--GGTT-TGTATTCTGAATGGATCCACCATCTGCCATAA 65112
|| |||| | |||| |||| | || | |||| || || || ||| || || |
Sbjct 2986 ATCTCTTATT-TCTTTCGGAATAGCTTCTATATTTTGTATTGACCCATTATTGTGTATTA 2928
Query 65113 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 65172
| ||| || || || |||| ||| || | | || |||||| | | | | |||
Sbjct 2927 TAAGATTTTTCATGTCTTCATCCCACAAATCTGCTTCAGTTAAATCACGCAATAAATGAT 2868
Query 65173 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 65232
|||| || ||||| || || |||||||| ||||| | ||| ||||| || | |
Sbjct 2867 GATTTACAACTTGGAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAG 2808
Query 65233 GTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 65292
|||| | || ||||| || || | ||||||||| || ||||| || |||||||| || |
Sbjct 2807 GTTCAAATGATTCATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTA 2748
Query 65293 CCAATAAACTATTTCTAAGACCGTATGTTCTGA--TTTTATCTTTTAGAGGTTCCCAATT 65350
|||||| |||||| | ||| ||| | || || | ||||||| || ||||| ||
Sbjct 2747 ATAATAAAGAATTTCTCAAACC--ATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTT 2690
Query 65351 CCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTA 65410
|||||| || | || ||||| ||||| | |||||
Sbjct 2689 CCAAAGGTCGGTGGGGGTTTTGCTCCACATGTCGTATTGTAATATACCTTGACTGGATGG 2630
Query 65411 CGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAA 65470
|||| | || || || || || | ||| || || ||||||||||| || ||||
Sbjct 2629 GCTTCCTTCGTAAGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAG 2570
Query 65471 TGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATC 65530
||| ||||||||||||||||| || || | | ||| || | ||| | || ||
Sbjct 2569 TGCCCCGTAATAAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTTC 2510
Query 65531 AAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 65590
| ||| | | | | ||| | ||||||| |||||||||||||| || |||||
Sbjct 2509 ATATGCAATGCGCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGG 2450
Query 65591 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 65650
||||| ||| |||| || || || || || || ||||| |||||| ||| || ||
Sbjct 2449 CCTATGCCTCATATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGAT 2390
Query 65651 TTTATTGAGATTTCTGAC-AATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC 65709
|||||| | ||| ||| ||| | |||| || || || | ||| ||||| | ||
Sbjct 2389 TTTATTTAAGTTT-TGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATATG 2331
Query 65710 GCTCATCT--ATTA-CAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCT 65766
| |||| |||| ||||||||||||| |||| |||||| | |||||| || || || |
Sbjct 2330 TTTTATCTTCATTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTT 2271
Query 65767 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 65826
| | ||| || |||| | ||||||||||| | |||||||| || || || ||||
Sbjct 2270 CGTCAGCTGACGTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTA 2211
Query 65827 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 65886
| || | ||| ||||| || ||||||| || || || ||||| || | || || || |
Sbjct 2210 AGTTCTTTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCG 2151
Query 65887 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTA----TTATAGAT 65942
|||||| || | ||| || || |||||||| | ||| | || | | || | |
Sbjct 2150 TTTCAACTTGGGCTTCGATTATGGCTTTCCATAAAACTTGGGCGCTGACCTGTTTCACAA 2091
Query 65943 TTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA 66002
| | ||||||| |||||||| || ||| | |||||| || |||||||||
Sbjct 2090 ----AACGCTTTTCTTTTTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCAACAG 2035
Query 66003 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 66062
| | ||||||||||| |||| |||||||| | ||| ||| | | | | |||
Sbjct 2034 TCAGCTAATCCAGGACAATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCAACT 1975
Query 66063 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCC 66122
| ||||||||| ||||| || ||||| | ||| ||| || |||| | || |||
Sbjct 1974 CTTTTCATAAAAAGATCCGGTATCCATAAAGCATAAAACAACTCTCGAGCTCGTACTTCT 1915
Query 66123 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCC 66182
|| || || || |||||||| || ||||| || | | ||| || |||||| || ||
Sbjct 1914 TCTTTGCCAGTGTTCTTTTTGAGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGGCTCT 1855
Query 66183 AAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 66242
|| || | || | | |||| || ||||| ||||| || ||||||| ||||| || |||
Sbjct 1854 AAATACACTGCAAAAGCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGCTGTG 1795
Query 66243 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 66302
|| || ||||| || | |||||| | | || || ||| |||||| || || | ||||
Sbjct 1794 TTGTTGTAAACCCTAAGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGCGATA 1735
Query 66303 TAGCTTCCACTTGCACGAATATTACTAATTGATAGA--CCTATTCCCCCTGCCATTTTAG 66360
|| ||| | || | ||| | | | | | || || ||||| || || |||||
Sbjct 1734 TATGATCCTTTAGCTCTGATA-CAGTGAACG-TGGACTCCGATTCCACCAGCAGATTTAG 1677
Query 66361 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 66420
| || | || ||| ||||||| |||||||| || || || ||||| ||||| ||||
Sbjct 1676 ATATAAGCGCACATTGTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCATAG 1617
Query 66421 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 66480
| |||||||| |||| ||| | || || | || || | ||| ||
Sbjct 1616 CTACAAGAAAACAAGATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGGGC 1557
Query 66481 AAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT 66540
||||| ||||| |||||||||| || | |||||| || | || || | |||||||
Sbjct 1556 TGGCGTGTGTAAAATATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATCTATAT 1497
Query 66541 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 66593
| ||| || || | | || | ||| | ||| ||||| |||| ||||
Sbjct 1496 CTTCACCATGGATACCAATAGATACTCTCATCAGCATATGCTGTGGTCGTTCA 1444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 656140173168920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |