Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 248 9e-61
seq15021 125 7e-24
seq67196 104 2e-17
seq168888 98.7 1e-15
>seq131719
Length=2163
Score = 248 bits (274), Expect = 9e-61
Identities = 360/503 (72%), Gaps = 4/503 (1%)
Strand=Plus/Minus
Query 20796 GCCGACATTGGGGTTCGCGCCATTGCCGCCCGGAAACTCCCAATCAATGTCGACGCCATC 20855
||||| ||||||||| ||||| || || || || ||||||||||| || |||||||| ||
Sbjct 2057 GCCGAGATTGGGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTC 1998
Query 20856 AAAGAATTTCCACGTTTCTAGATACTCTTGGACCGAATCGAT-AAACGTTTGGCGCACGA 20914
|||||||||||| || | || | |||| || ||| | | ||||| | |||
Sbjct 1997 AAAGAATTTCCAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCA-CGCTTTG 1939
Query 20915 TCTTGTC-GTGCATATGGAAAAATGGGTCCGAAAGTGTCCAGCCCCCGATAGACGGTAAC 20973
||||||| ||| | | || ||||| || | | |||||||| |||| || || ||
Sbjct 1938 TCTTGTCAGTGAAGAAA-AAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAA 1880
Query 20974 ACTTTGAGATGCGGGTTCGCCAATTTCGCGGCCATAAGTTGGCCAAAGTTGCCTTTGTAC 21033
| ||||| | || ||||| |||| ||| |||||||| ||||| ||||||||
Sbjct 1879 ATCTTGAGGTCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAA 1820
Query 21034 GGTTCGTTCCATGCGCTGACACCTTTCTGGGGTTTCTGTATGGCCGCCCACGGATCGTGA 21093
||||||||||||| | || || || |||||||| | || ||||| || || |||
Sbjct 1819 GGTTCGTTCCATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGA 1760
Query 21094 ATGGCCACCTTAAAGTCGGCACGGCCCGCGCACGAACGTTGCAACGCTTCGAAACTGCCC 21153
|||| ||| || ||||| | ||||| ||| ||||| || | || | ||||||||||
Sbjct 1759 ATGGACACTTTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCC 1700
Query 21154 GGGACACTTTTGAGCGCATCGTTGATGCCTTCGCCTCCGCACATGGGCACGAAACCGTAC 21213
| || || ||||||||||| ||||||||||| || || | ||| ||||||
Sbjct 1699 TCAATCTCCTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTAC 1640
Query 21214 AACAAATGCGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGGCGCGGATACACA 21273
||||| || | || || || | ||||| || ||||| |||| | |||||||||
Sbjct 1639 AACAAGTGAGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACT 1580
Query 21274 CCCCATTCGACAAAGTATGCTCC 21296
|||||||| || ||||| |||||
Sbjct 1579 CCCCATTCTACGAAGTAAGCTCC 1557
>seq15021
Length=1916
Score = 125 bits (138), Expect = 7e-24
Identities = 157/213 (74%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612
|| || ||||||| ||||| ||||| ||||| || ||||| | ||||| ||||
Sbjct 939 AACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTGCGGCCGTCT 880
Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672
|| | |||||||||||| |||||| ||||| ||||| ||||| || || ||||| ||
Sbjct 879 TCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGAATACCCTCTTTATCT 820
Query 139673 GTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731
||| | || | ||| | | ||| | ||||||| | ||||||||| | ||| | ||
Sbjct 819 -TGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACCTCTAGGGTGATGGT 761
Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| || || | |||||||||||||| |||||
Sbjct 760 CTTCCCCGTTAGGGTTTTTACGAATATCTGCAT 728
>seq67196
Length=1848
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||||||||| | |||| || || |||||||| || ||||| ||
Sbjct 240 CCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGAT 299
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| |||||||| |||||| ||||||||||||| ||||| || ||
Sbjct 300 AGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGA 359
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| || || ||| | || | ||| | | ||| | ||||| | ||||| ||
Sbjct 360 ATACCTTCCTTATC-CTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAAC 418
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | || || || ||||| ||||| || || || ||||||
Sbjct 419 TTCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCATA 467
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| || ||||||||||| || ||||| || || | |||||| | ||| || |||
Sbjct 726 GTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCGTCTTCCAACTGCTTTCCA 785
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| | |||||||| |||||||| || || || ||||||||||| ||| | || | |||
Sbjct 786 GCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTC-CTGAATCTTAGCTTT 844
Query 139688 AGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | | || | || || | || || || || | ||| | ||| || || ||||| ||
Sbjct 845 AACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGATCGTTTTTCCAGTCAAAGT 904
Query 139747 TTTTACGAATATTTGCAT 139764
||| ||||| || |||||
Sbjct 905 TTTCACGAAAATCTGCAT 922
>seq168888
Length=4095
Score = 98.7 bits (108), Expect = 1e-15
Identities = 464/729 (64%), Gaps = 11/729 (2%)
Strand=Plus/Minus
Query 153072 TTGACAACTTGAAATTCGCCCGACAATACACGTCTCAAAAACAAATTAC-TGTGAAACGG 153130
|| |||||||| || ||||| ||||| || | ||| | | ||| ||||||| ||
Sbjct 2865 TTTACAACTTGGAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAA-GG 2807
Query 153131 TTCAAACGACTCGTTGTTATTGAGTATTTGTGCGGTCGTGGCCGTCGGCATGTACGCCAC 153190
|||||| || || |||||| || ||||| || || | || || ||||| || |
Sbjct 2806 TTCAAATGATTCATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAA 2747
Query 153191 AAGCAACGAATTACGTAATCCGTGTTTTTGTATG-TTCATCTTCAATTGTGACCAGTCCC 153249
| || ||||| | || || || || || || | || || | ||||| ||
Sbjct 2746 TAATAAAGAATTTCTCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATC-CCAGTTCC 2688
Query 153250 ATAA--CGAAGTAGGTATCGCATTCCACAAATCGTATTGCAATATCCCTTGGCTAGCTTT 153307
| | || | ||| | || |||||| |||||||| ||||| ||||| || | |
Sbjct 2687 AAAGGTCGGTGGGGGTTTTGC--TCCACATGTCGTATTGTAATATACCTTGACTGGATGG 2630
Query 153308 GCTACCGGCAAACGTGCTATACGGCTCACTGTCAGACGCCAGTTTCAAACTGGCATCGAG 153367
||| || | | ||| ||| | || | || |||| |||| || || ||
Sbjct 2629 GCTTCCTTCGTAAGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAG 2570
Query 153368 CGCGGCATGATACACAGTTTCGGAAATCTGTTTGTTCAGTAAAACGGCAGCATCGCTCAC 153427
|| | | ||| | ||||| | || |||| || ||| | || ||||| || |
Sbjct 2569 TGCCCCGTAATAAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTTC 2510
Query 153428 GTACGGTATGCGCAACATGACAAATGCATCGGCCAAACCTTGAATGCCAATGCCTATGGG 153487
|| | ||||||| || |||||||| ||| || | ||||||| ||||| ||||| ||
Sbjct 2509 ATATGCAATGCGCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGG 2450
Query 153488 ACGATGGCGCATATTAGAtttttttGCAGCTTCAACAGGATAGAAATTGCGGTCGATAAT 153547
| ||| | |||||| |||||| |||| | | ||||||||||| || || ||
Sbjct 2449 CCTATGCCTCATATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGAT 2390
Query 153548 TTTATTTAAACTAATCACGACATGTTTCACCACAGAATGCAACAGTTGAAAATCAAACGT 153607
||||||||| | | | ||| || | || | ||||| | | ||
Sbjct 2389 TTTATTTAAGTTTTGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATATGT 2330
Query 153608 T---CCATTAATGATATATTTGTTGACGGCAATCGACGCCAAGTTGCAAACGGCAGTTTC 153664
| | | | | | | | |||| | ||||| || || || || || || || |||
Sbjct 2329 TTTATCTTCATTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTTC 2270
Query 153665 GTCGGGGGCGCAATATTGTACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCA 153724
||| | | |||| || || || | || || || || |||||||| ||| |
Sbjct 2269 GTCAGCTGACGTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTAA 2210
Query 153725 ATTACTTTGATTGCTTTTGCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGT 153784
|| |||| || ||||| | |||||||||||| ||||| ||||| || ||||| || ||
Sbjct 2209 GTTCTTTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCGT 2150
Query 153785 TTCGGCTTG 153793
||| ||||
Sbjct 2149 TTCAACTTG 2141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494532011749600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |