Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq131719 248 9e-61 seq15021 125 7e-24 seq67196 104 2e-17 seq168888 98.7 1e-15 >seq131719 Length=2163 Score = 248 bits (274), Expect = 9e-61 Identities = 360/503 (72%), Gaps = 4/503 (1%) Strand=Plus/Minus Query 20796 GCCGACATTGGGGTTCGCGCCATTGCCGCCCGGAAACTCCCAATCAATGTCGACGCCATC 20855 ||||| ||||||||| ||||| || || || || ||||||||||| || |||||||| || Sbjct 2057 GCCGAGATTGGGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTC 1998 Query 20856 AAAGAATTTCCACGTTTCTAGATACTCTTGGACCGAATCGAT-AAACGTTTGGCGCACGA 20914 |||||||||||| || | || | |||| || ||| | | ||||| | ||| Sbjct 1997 AAAGAATTTCCAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCA-CGCTTTG 1939 Query 20915 TCTTGTC-GTGCATATGGAAAAATGGGTCCGAAAGTGTCCAGCCCCCGATAGACGGTAAC 20973 ||||||| ||| | | || ||||| || | | |||||||| |||| || || || Sbjct 1938 TCTTGTCAGTGAAGAAA-AAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAA 1880 Query 20974 ACTTTGAGATGCGGGTTCGCCAATTTCGCGGCCATAAGTTGGCCAAAGTTGCCTTTGTAC 21033 | ||||| | || ||||| |||| ||| |||||||| ||||| |||||||| Sbjct 1879 ATCTTGAGGTCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAA 1820 Query 21034 GGTTCGTTCCATGCGCTGACACCTTTCTGGGGTTTCTGTATGGCCGCCCACGGATCGTGA 21093 ||||||||||||| | || || || |||||||| | || ||||| || || ||| Sbjct 1819 GGTTCGTTCCATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGA 1760 Query 21094 ATGGCCACCTTAAAGTCGGCACGGCCCGCGCACGAACGTTGCAACGCTTCGAAACTGCCC 21153 |||| ||| || ||||| | ||||| ||| ||||| || | || | |||||||||| Sbjct 1759 ATGGACACTTTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCC 1700 Query 21154 GGGACACTTTTGAGCGCATCGTTGATGCCTTCGCCTCCGCACATGGGCACGAAACCGTAC 21213 | || || ||||||||||| ||||||||||| || || | ||| |||||| Sbjct 1699 TCAATCTCCTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTAC 1640 Query 21214 AACAAATGCGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGGCGCGGATACACA 21273 ||||| || | || || || | ||||| || ||||| |||| | ||||||||| Sbjct 1639 AACAAGTGAGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACT 1580 Query 21274 CCCCATTCGACAAAGTATGCTCC 21296 |||||||| || ||||| ||||| Sbjct 1579 CCCCATTCTACGAAGTAAGCTCC 1557 >seq15021 Length=1916 Score = 125 bits (138), Expect = 7e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612 || || ||||||| ||||| ||||| ||||| || ||||| | ||||| |||| Sbjct 939 AACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTGCGGCCGTCT 880 Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672 || | |||||||||||| |||||| ||||| ||||| ||||| || || ||||| || Sbjct 879 TCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGAATACCCTCTTTATCT 820 Query 139673 GTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731 ||| | || | ||| | | ||| | ||||||| | ||||||||| | ||| | || Sbjct 819 -TGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACCTCTAGGGTGATGGT 761 Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| || || | |||||||||||||| ||||| Sbjct 760 CTTCCCCGTTAGGGTTTTTACGAATATCTGCAT 728 >seq67196 Length=1848 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||||||| | |||| || || |||||||| || ||||| || Sbjct 240 CCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGAT 299 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| |||||||| |||||| ||||||||||||| ||||| || || Sbjct 300 AGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGA 359 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| | || | ||| | | ||| | ||||| | ||||| || Sbjct 360 ATACCTTCCTTATC-CTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAAC 418 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | || || || ||||| ||||| || || || |||||| Sbjct 419 TTCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCATA 467 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || || ||||||||||| || ||||| || || | |||||| | ||| || ||| Sbjct 726 GTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCGTCTTCCAACTGCTTTCCA 785 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| | |||||||| |||||||| || || || ||||||||||| ||| | || | ||| Sbjct 786 GCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTC-CTGAATCTTAGCTTT 844 Query 139688 AGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | | || | || || | || || || || | ||| | ||| || || ||||| || Sbjct 845 AACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGATCGTTTTTCCAGTCAAAGT 904 Query 139747 TTTTACGAATATTTGCAT 139764 ||| ||||| || ||||| Sbjct 905 TTTCACGAAAATCTGCAT 922 >seq168888 Length=4095 Score = 98.7 bits (108), Expect = 1e-15 Identities = 464/729 (64%), Gaps = 11/729 (2%) Strand=Plus/Minus Query 153072 TTGACAACTTGAAATTCGCCCGACAATACACGTCTCAAAAACAAATTAC-TGTGAAACGG 153130 || |||||||| || ||||| ||||| || | ||| | | ||| ||||||| || Sbjct 2865 TTTACAACTTGGAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAA-GG 2807 Query 153131 TTCAAACGACTCGTTGTTATTGAGTATTTGTGCGGTCGTGGCCGTCGGCATGTACGCCAC 153190 |||||| || || |||||| || ||||| || || | || || ||||| || | Sbjct 2806 TTCAAATGATTCATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAA 2747 Query 153191 AAGCAACGAATTACGTAATCCGTGTTTTTGTATG-TTCATCTTCAATTGTGACCAGTCCC 153249 | || ||||| | || || || || || || | || || | ||||| || Sbjct 2746 TAATAAAGAATTTCTCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATC-CCAGTTCC 2688 Query 153250 ATAA--CGAAGTAGGTATCGCATTCCACAAATCGTATTGCAATATCCCTTGGCTAGCTTT 153307 | | || | ||| | || |||||| |||||||| ||||| ||||| || | | Sbjct 2687 AAAGGTCGGTGGGGGTTTTGC--TCCACATGTCGTATTGTAATATACCTTGACTGGATGG 2630 Query 153308 GCTACCGGCAAACGTGCTATACGGCTCACTGTCAGACGCCAGTTTCAAACTGGCATCGAG 153367 ||| || | | ||| ||| | || | || |||| |||| || || || Sbjct 2629 GCTTCCTTCGTAAGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAG 2570 Query 153368 CGCGGCATGATACACAGTTTCGGAAATCTGTTTGTTCAGTAAAACGGCAGCATCGCTCAC 153427 || | | ||| | ||||| | || |||| || ||| | || ||||| || | Sbjct 2569 TGCCCCGTAATAAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTTC 2510 Query 153428 GTACGGTATGCGCAACATGACAAATGCATCGGCCAAACCTTGAATGCCAATGCCTATGGG 153487 || | ||||||| || |||||||| ||| || | ||||||| ||||| ||||| || Sbjct 2509 ATATGCAATGCGCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGG 2450 Query 153488 ACGATGGCGCATATTAGAtttttttGCAGCTTCAACAGGATAGAAATTGCGGTCGATAAT 153547 | ||| | |||||| |||||| |||| | | ||||||||||| || || || Sbjct 2449 CCTATGCCTCATATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGAT 2390 Query 153548 TTTATTTAAACTAATCACGACATGTTTCACCACAGAATGCAACAGTTGAAAATCAAACGT 153607 ||||||||| | | | ||| || | || | ||||| | | || Sbjct 2389 TTTATTTAAGTTTTGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATATGT 2330 Query 153608 T---CCATTAATGATATATTTGTTGACGGCAATCGACGCCAAGTTGCAAACGGCAGTTTC 153664 | | | | | | | | |||| | ||||| || || || || || || || ||| Sbjct 2329 TTTATCTTCATTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTTC 2270 Query 153665 GTCGGGGGCGCAATATTGTACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCA 153724 ||| | | |||| || || || | || || || || |||||||| ||| | Sbjct 2269 GTCAGCTGACGTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTAA 2210 Query 153725 ATTACTTTGATTGCTTTTGCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGT 153784 || |||| || ||||| | |||||||||||| ||||| ||||| || ||||| || || Sbjct 2209 GTTCTTTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCGT 2150 Query 153785 TTCGGCTTG 153793 ||| |||| Sbjct 2149 TTCAACTTG 2141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494532011749600