Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq168888 506 3e-138
>seq168888
Length=4095
Score = 506 bits (560), Expect = 3e-138
Identities = 1186/1778 (67%), Gaps = 22/1778 (1%)
Strand=Plus/Minus
Query 70792 TTGTCCAATGTAAACTGAATGGGAGAGGATGC-GGCTTTCGTACGTAGATAGTACATGCC 70850
|| || | ||||||||| || | | | || |||||| || | | ||| ||||||||
Sbjct 3213 TTATCAACTGTAAACTGTATAGCATTAGCAGCTGGCTTT-GTTCTCAAATAATACATGCC 3155
Query 70851 TGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGG 70910
||||| ||||| | |||| | ||||| || || |||| ||| || | ||
Sbjct 3154 GGTTTTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTTACCGTAATTTGG 3095
Query 70911 ATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 70970
|| |||| ||||| || | ||||||||||| || || || || ||||| || |||||
Sbjct 3094 TTCAGCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACCCCTATCGGCAGC 3035
Query 70971 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 71029
||||| || | || || | | ||||||| ||| ||||| | || |||| | |
Sbjct 3034 CATTTGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAGATCTCTTATT-T 2976
Query 71030 CTTCTGGAA--GGTT-TGTATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGA 71086
||| |||| | || | |||| || || || ||| || || || |||||| |
Sbjct 2975 CTTTCGGAATAGCTTCTATATTTTGTATTGACCCATTATTGTGTATTATAAGATTTTTCA 2916
Query 71087 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTT 71146
| ||||||| ||| || | | || |||||| | | | | |||| |||| || ||||
Sbjct 2915 TGTCTTCATCCCACAAATCTGCTTCAGTTAAATCACGCAATAAATGATGATTTACAACTT 2856
Query 71147 GAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACT 71206
| || || |||||||| ||||| | ||| ||||| || | ||||| | ||| |
Sbjct 2855 GGAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAGGTTCAAATGATT 2796
Query 71207 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTAT 71266
|||| || || | ||||||||| || ||||| || |||||||| || | |||| | ||
Sbjct 2795 CATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAATAATAAAGAAT 2736
Query 71267 TTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATG 71326
|||| | |||||| ||| | ||||||| || ||||| |||||||| || | |
Sbjct 2735 TTCTCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTTCCAAAGGTCGGTGG 2676
Query 71327 GTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGA---TCCTGCAT 71383
| || || | ||| | ||| |||| | |
Sbjct 2675 GGGTTTTGCTCCACATGTCGTATTGTAATATACCTTGACTGG---ATGGGCTTCCTTCGT 2619
Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAAT 71443
| || || || || | ||||| || ||||||||||| || |||| ||| || ||||
Sbjct 2618 AAGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAGTGCCCCGTAAT 2559
Query 71444 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAAT 71503
|||||||||| || || | | ||| || | ||| | || ||| ||| |
Sbjct 2558 AAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTTCATATGCAATGC 2499
Query 71504 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCT 71563
| | | ||| | ||||||| |||||||| ||||| || ||||| || || |||
Sbjct 2498 GCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGGCCTATGCCTCA 2439
Query 71564 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 71623
|||| || || || || || || ||||| |||||| ||| || |||||||| | |
Sbjct 2438 TATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGATTTTATTTAAGT 2379
Query 71624 TTCTGACTATTACTTT-GACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCT--A 71680
|| ||| || || ||| | || || |||| ||| ||||| | || | |||| |
Sbjct 2378 TT-TGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATATGTTTTATCTTCA 2320
Query 71681 TTA-CAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCG 71739
||| |||||| |||||| |||| |||||| | |||||| || || || || | |||
Sbjct 2319 TTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTTCGTCAGCTGAC 2260
Query 71740 GCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 71799
| |||| | || |||||||| | |||||||| || || || ||||| || | |||
Sbjct 2259 GTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTAAGTTCTTTTGG 2200
Query 71800 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGA 71859
||||| || ||||||| || || || ||||| ||| | || || || ||||||| ||
Sbjct 2199 TTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCGTTTCAACTTGG 2140
Query 71860 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCT 71919
| ||| || || |||||||| | ||| | || | | ||| | | |||||||
Sbjct 2139 GCTTCGATTATGGCTTTCCATAAAACTTGGGCGCTGACCTGTTTCACAAAACGCTTTTCT 2080
Query 71920 CTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGA 71979
||||||||||| ||||| |||||| || ||||||||| | |||||||||||
Sbjct 2079 TTTTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCAACAGTCAGCTAATCCAGGA 2020
Query 71980 CATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGA 72039
|| |||| |||||||| | ||| ||| ||| | | |||| ||||||||| |||
Sbjct 2019 CAATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCAACTCTTTTCATAAAAAGA 1960
Query 72040 TCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT-ATGC-TCCTCGTTTCCTGTAT 72097
|| || ||||| | ||| ||||| | | |||| | || | | || || || || || |
Sbjct 1959 TCCGGTATCCATAAAGC-ATAAA-ACAACTCTCGAGCTCGTACTTCTTCTTTGCCAGTGT 1902
Query 72098 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 72157
||||||| || ||||| || | | ||| || | |||||| || || || || | || |
Sbjct 1901 TCTTTTTGAGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGGCTCTAAATACACTGCAA 1842
Query 72158 TAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 72217
| |||| || ||||| ||||| || ||||||| ||||| || ||||| || ||||| |
Sbjct 1841 AAGCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGCTGTGTTGTTGTAAACCC 1782
Query 72218 TCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGG 72277
| | |||||| | | || || ||| ||||||| || || | |||||| ||| | |
Sbjct 1781 TAAGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGCGATATATGATCCTTTAG 1722
Query 72278 CACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 72337
| | ||| | || | || ||||| || || |||||| || | || |||
Sbjct 1721 CTCTGATACAGTGAACGTGGACTCCGATTCCACCAGCAGATTTAGATATAAGCGCACATT 1662
Query 72338 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 72397
||||||| |||||||| || || || ||||| ||||| |||| | ||||||||
Sbjct 1661 GTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCATAGCTACAAGAAAACAAG 1602
Query 72398 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 72457
|||| ||| | || || | || || | ||| || ||||| |||||
Sbjct 1601 ATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGGGCTGGCGTGTGTAAAAT 1542
Query 72458 ATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTC 72517
||||||||||||| | |||||| || | || || | |||||||| ||| || |
Sbjct 1541 ATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATCTATATCTTCACCATGGATAC 1482
Query 72518 CTACCGCGACACGCATTAACATATGCTGAGGTCTTTCA 72555
| | | || | ||| | ||||||||| |||| ||||
Sbjct 1481 CAATAGATACTCTCATCAGCATATGCTGTGGTCGTTCA 1444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 669066529197880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |