Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 232 7e-56
seq193007 116 4e-21
seq67196 109 6e-19
seq15021 107 2e-18
>seq131719
Length=2163
Score = 232 bits (256), Expect = 7e-56
Identities = 359/507 (71%), Gaps = 12/507 (2%)
Strand=Plus/Minus
Query 19401 GCCGACGTTGGGGTTCGCGCCATTGCCGCCTGGAAACTCCCAATCGATATCGACGCCATC 19460
||||| |||||||| ||||| || || || || ||||||||||||||||||||||| ||
Sbjct 2057 GCCGAGATTGGGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTC 1998
Query 19461 GAAGAATTTCCACGTTTCTAGATACTCTTGGACCGAATCGAT-AAACGTCTGCCGTACGC 19519
||||||||||| || | || | |||| || ||| | | ||||| | | ||||
Sbjct 1997 AAAGAATTTCCAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACG---GTC--ACGC 1943
Query 19520 TCTTGTCGTGCATATG--GTAAAA---TGGGTCCGAAAGTGTCCAGCCCCCGATCGAAGG 19574
| ||||| || || | |||| ||| || | | |||||||| |||| |||||
Sbjct 1942 T-TTGTCTTGTCAGTGAAGAAAAAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGG 1884
Query 19575 TAGCACTTTTAGATGAGGGTTCGCCAATTTGGCTGCCATAAGTTGGCCAAAGTTGCCTTT 19634
| | || || | || ||||| ||| ||| |||||||| ||||| |||||
Sbjct 1883 CAAAATCTTGAGGTCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTT 1824
Query 19635 GTACGGTTCGTTCCATGCGCTGACACCTTTTTGGGGTTTCTGTATGGCCGCCCAAGGATC 19694
||| ||||||||||||| | || ||||| |||||||| | || ||||| || ||
Sbjct 1823 GTAAGGTTCGTTCCATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTC 1764
Query 19695 GTGAATGGCCACTTTGAAGTCGGCACGACCGGCACACGAACGTTGCAACGCTTCGAAACT 19754
||||||| |||||||||||| | || ||| || ||||| || | || | ||||||
Sbjct 1763 ATGAATGGACACTTTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACT 1704
Query 19755 GCCCGGGACAGTTTTGAGGGCATCATTGATGCCGTCGCCACCGCACATGGGCACGAAACC 19814
|||| | || || || |||||||||||||| ||||| || || | ||| ||
Sbjct 1703 GCCCTCAATCTCCTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCC 1644
Query 19815 GTACAACAAATGCGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGTCGCGGATA 19874
||||||||| || | || || || | ||||| || ||||| |||| | ||||||
Sbjct 1643 GTACAACAAGTGAGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATA 1584
Query 19875 CACACCCCATTCGACAAAGTATGCACC 19901
||| |||||||| || ||||| || ||
Sbjct 1583 CACTCCCCATTCTACGAAGTAAGCTCC 1557
>seq193007
Length=659
Score = 116 bits (128), Expect = 4e-21
Identities = 154/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTT 143033
||| || || | |||||||||||| || || ||||| ||| | ||||| || | ||||
Sbjct 421 AACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCA-TCTT 479
Query 143034 CGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGG 143093
| |||||||| |||||| |||| ||||| || || || || || || |||||||||||
Sbjct 480 CAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTT 539
Query 143094 TAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCT 143153
|||||| ||| | | || | ||||||| ||||| ||||| | ||| | || |
Sbjct 540 GAATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTT 599
Query 143154 TGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|||| || | ||| || || || || |||||
Sbjct 600 TGCCAGTAAGTGTCTTGACAAAGATCTGCAT 630
>seq67196
Length=1848
Score = 109 bits (120), Expect = 6e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||||||||| | ||||| || ||||||||||| || || || ||
Sbjct 240 CCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGAT 299
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| |||| ||||| || ||||| |||||| ||||||||||||| ||||| || ||
Sbjct 300 AGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGA 359
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| || || ||| || ||| | | ||| | ||||| | || || |||
Sbjct 360 ATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACT 419
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | || || || ||||| ||||| || || || ||||||
Sbjct 420 TCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCATA 467
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||| || | || | ||| | ||| | || ||||||||||| || |||||||| |
Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | |||||| | || || |||||| | |||||||| |||||||| || ||
Sbjct 756 AAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGG 815
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| ||| || ||| | | || | || || | ||||| |||
Sbjct 816 ATACCTTCTTTGTCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACT 875
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | ||| || || ||||| ||||| ||||| || |||||
Sbjct 876 TCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCAT 922
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||||| |||| ||| | ||||||||||| || || ||||| ||
Sbjct 468 CCACCACGCAGACGCAGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 527
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | | ||||| |||||||| |||||| | |||| | ||||| || || ||
Sbjct 528 AGGGTACGCCCATCTTCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGG 587
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| || || |||||| || | | ||| | ||||||| || || |||
Sbjct 588 ATCCCTTCCTTATCTTGAATTTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCAACT 647
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188
|||| || | || ||||| || | ||||| || || || |||||| ||
Sbjct 648 TCAAGTGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATCTGCATACCT 698
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||||| || | ||| | ||||||||||| || || ||||| ||
Sbjct 12 CCACCACGGAGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 71
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| |||| | ||||| |||||||| ||||| | ||||| | ||||| || || ||
Sbjct 72 AGGGTGCGCCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGG 131
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || || || || ||| || ||||| | || | ||||| | || |||||
Sbjct 132 ATCCCCTCCTTATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTACC 191
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| | ||| | || || || ||||| ||||| || || || ||||||
Sbjct 192 TCTAGAGTAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCATA 239
>seq15021
Length=1916
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 142973 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 143032
|| || || |||| ||||||||||| || || |||||||| | ||||| ||||
Sbjct 939 AACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTGCGGCCGTCT 880
Query 143033 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 143092
|| | ||||||||||||| |||||| ||||| ||||| ||||| || || ||||| ||
Sbjct 879 TCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGAATACCCTCTTTATCT 820
Query 143093 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTC 143152
||| || ||| | | ||| | ||||| | | || || || | || | |||
Sbjct 819 TGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACCTCTAGGGTGATGGTC 760
Query 143153 TTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| || || | |||||||||||||| |||||
Sbjct 759 TTCCCCGTTAGGGTTTTTACGAATATCTGCAT 728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505448593766160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |