Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq168888 150 3e-31
seq38475 116 5e-21
>seq168888
Length=4095
Score = 150 bits (166), Expect = 3e-31
Identities = 346/508 (68%), Gaps = 11/508 (2%)
Strand=Plus/Plus
Query 97758 AAAGACATTGCTCGGTACGGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCT 97817
||||| ||| || | | ||||||||||| ||||| | | || || ||||| || ||
Sbjct 2709 AAAGA-ATTTCTAAGCATGGTTTGAGAAATTCTTTATTATTAGCTCCTATGCCAACAGCA 2767
Query 97818 ACCACTTCCCAAGTGTTTGGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTAC 97877
|||| | ||| | |||| || |||||| |||||||| ||||| ||||| || |||
Sbjct 2768 TCCACGGCTCAAATTCTTGGTAACAATGAATCATTTGAACCTTTCACATCAAATATATAC 2827
Query 97878 CAGAGACGCACCCAGTCTGGAGAGTTTCAA-TTGACCAACGTGCACTTGGTTCGAGACTT 97936
|| ||| | |||||| ||||| ||| ||| | | | || || | || || ||
Sbjct 2828 CAAAGAAGAGTTTTGTCTGGCGAGTTCCAAGTTGTAAATCAT-CATTTATTGCGTGATTT 2886
Query 97937 GGAACGGCT-CA-ATCTGTGGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGG 97994
||| | || || ||||| | || |||||| | | || || |||| ||||||
Sbjct 2887 --AACTGAAGCAGATTTGTGGGATGAAGACATGAAAAATCTTATAATACACAATAATGGG 2944
Query 97995 TCCATTCAAAACATTACCATC-ATCCCGGAAGAGTTGCGCAGAA-TCTACAAGACTGTCT 98052
|| || ||||| || | | | || ||| |||| | | ||| | || |||||||| |
Sbjct 2945 TCAATACAAAATAT-AGAAGCTATTCCGAAAGAAATAAG-AGATCTATATAAGACTGTTT 3002
Query 98053 GGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACC 98112
||||| | | || || || | ||||||||||| || |||| | |||||||
Sbjct 3003 GGGAGGTGTCTGTTAAAACTACAATTCAAATGGCTGCCGATAGGGGTGCATTTATTGACC 3062
Query 98113 AGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGTATGACTTCGATAC 98172
| ||||| || || || | | || || || || | ||| || | || ||||| |
Sbjct 3063 AAAGTCAGTCTTTTAACATTCATGTAGCTGAACCAAATTACGGTAAATTAACATCGATTC 3122
Query 98173 ACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAACAAAGTCGG 98232
||||||| || ||||| | ||| || || || |||||||| ||| ||||||||||| | |
Sbjct 3123 ACTTTTATGCTTGGAAAATGGGTCTTAAAACCGGCATGTATTATTTGAGAACAAAGCCAG 3182
Query 98233 CCACCAATGCCATACCATTTACGGTGGA 98260
| | ||||| |||| ||||| || ||
Sbjct 3183 CTGCTAATGCTATACAGTTTACAGTTGA 3210
Score = 93.3 bits (102), Expect = 6e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 96825 GGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGC 96884
|| || ||||||||||| || | ||||| | || |||| || || || ||
Sbjct 1763 GGACTCGTGCCAATGCTTAGGGTTTACAACAACACAGCAAGATATGTAGATCAAGGTGGA 1822
Query 96885 AATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGAC 96944
|||||||| || || ||| | || || || || || |||||||| || ||| |||||||
Sbjct 1823 AATAAACGCCCCGGAGCTTTTGCAGTGTATTTAGAGCCTTGGCATGCAGACATTTTTGAA 1882
Query 96945 TTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTAT 97004
||| |||| | || ||| ||||| ||||| | |||||| | || |||||||||
Sbjct 1883 TTTCTCGACCTCAAAAAGAACACTGGCAAAGAAGAAGTACGAGCTCGAGAGTTGTTTTAT 1942
Query 97005 GCACTCTGGGTGCCAGATTTGTTCATGAA 97033
|| | ||| | || ||| | || |||||
Sbjct 1943 GCTTTATGGATACCGGATCTTTTTATGAA 1971
>seq38475
Length=2156
Score = 116 bits (128), Expect = 5e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 70202 GATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCA 70261
|| || || || |||| || |||||||||| |||||||| ||||||| || ||
Sbjct 1770 GACAGAAGAATGTTAATATGTGCATGGAATCCATCAGATTTGAGTAAAATGGCCCTTCCT 1711
Query 70262 CCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGA-TGGCAAATTGTCATGCTTAATGTA 70320
|| ||||| ||||||||||| ||| | | | | | ||| || || ||||| || | ||
Sbjct 1710 CCATGTCATTGTTTGGCTCAATTTCA-TGTTGCCAGTGGAAAGTTATCATGTTTGTTATA 1652
Query 70321 TCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTT 70380
|| || ||||| || ||||| || || ||||| ||||| || ||||| |||||| | |
Sbjct 1651 CCAAAGAAGTGCTGATATGGGTCTAGGAGTACCATTTAATATAGCAAGTTATTCTCTTCT 1592
Query 70381 GACGCACATGATTGCTCA 70398
|| ||||||||||| ||
Sbjct 1591 TACACACATGATTGCACA 1574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 738770596135880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |