Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq67196 100 2e-16
seq193007 89.7 4e-13
>seq67196
Length=1848
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
||||| | |||||||||||| |||||||| || || || || ||| | | | |||
Sbjct 255 AAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGTGCGGCCATCT 314
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| | ||||| ||||| | |||| ||||||||| || ||||| ||||| || ||
Sbjct 315 TCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACCTTCCTTATCC 374
Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331
||| ||| || ||| |||| ||||| || || || |||| || || |||
Sbjct 375 TGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAGAGTGATAGTT 434
Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||||| |||| ||||| ||||| || ||||||
Sbjct 435 TTACCAGTCAAGGTTTTAACAAAGATCTGCATA 467
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 15148 TCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGC 15207
|| || ||| | ||| | ||||| |||||||| || |||||||| | | | | |
Sbjct 707 TCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCC 766
Query 15208 GTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTT 15267
|||||| || || || ||||| | |||| ||| || || || || || ||||||||
Sbjct 767 GTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTT 826
Query 15268 GTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAA 15326
||| ||| || ||| || || | || || ||||| | ||| || || ||||| |
Sbjct 827 GTCCTGAATCTTAGCT-TTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGA 885
Query 15327 TGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
| ||||| || |||| |||||| || ||||| |||||
Sbjct 886 TCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCAT 922
>seq193007
Length=659
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213
||| || || | || || ||||| || || ||||| ||| ||| | | | |||||
Sbjct 421 AACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTC 480
Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273
| |||||| ||||| | || | ||| |||||||| ||||| |||||||||||
Sbjct 481 AAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTG 540
Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTAT-TTTCTACATCTAAGGTAATGGTTT 15332
||||||| || ||| | || || || || | || ||| || ||||| || || ||||
Sbjct 541 AATTTTGGCTTTGACATTCTCAATAGTGTC-CGATGGTTCAACTTCTAAAGTGATAGTTT 599
Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
| || || || || || ||||| || |||||
Sbjct 600 TGCCAGTAAGTGTCTTGACAAAGATCTGCAT 630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361088649341283
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |