Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 269 2e-67
seq131720 138 9e-28
seq67196 107 2e-18
seq15021 102 7e-17
>seq131719
Length=2163
Score = 269 bits (298), Expect = 2e-67
Identities = 424/601 (71%), Gaps = 7/601 (1%)
Strand=Plus/Minus
Query 100685 GTCAACTCGTACGTTTTGCCCGTTTGCAGTTGTAGCTGGTCCAGCATCGCGCGCAATTCC 100744
||||||||||| | | || |||| | |||| || || |||| |||||| ||||
Sbjct 2155 GTCAACTCGTATTTCCTTCCAGTTTCCGCCGAGAGCTCGTTCAACATCTCGCGCAGTTCC 2096
Query 100745 TTCAGTAAAATGTTGTACGTGTCGGCGTCGCGCTCCCCGTTGCCAAGAGTCGGGTTGGCG 100804
|||| | || ||| | || |||| || |||| ||| | ||||| |||
Sbjct 2095 TTCATCAGAAGTACGTAGATTTCTCCGTCCTTGGGCC---TGCCGAGATTGGGGTTAGCG 2039
Query 100805 CCTTTGCCGCCCGGAAACTCCCAGTCAATGTCCACGCCGTCAAAAAACTTCCACACCTGC 100864
||||| || || || |||||||| || || || ||||||||||| || ||||| |||
Sbjct 2038 CCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTCCAGGTCTGG 1979
Query 100865 AAAAATTCCTTGACCGAGTCCACAAACACGCGC-CGTTTTTCCGCATC-GTGCATGAAAT 100922
| || || || || || | || || ||| | || ||| | || ||| | ||||
Sbjct 1978 AGGAAGTCTTTTACGGAAGCAACGAA-ACGGTCACGCTTTGTCTTGTCAGTGAA-GAAAA 1921
Query 100923 AGAACGGGTCGGACAACGTCCAGCCGCCGATGGACGGCAGAATTTTGAGGTGCGGATTGG 100982
|||| || || | ||| ||||||||||||| ||| |||| ||| ||||||| || | |
Sbjct 1920 AGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTGAGGTCTGGTCTCG 1861
Query 100983 CCAGCTTGGCCGCCATTAGCTGACCGAAATTGCCCTTGTACGGCTCGTTCCATGCGGACA 101042
|| | || | ||| || || ||||| || || ||||| || |||||||||| || |
Sbjct 1860 CCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTTCCATGAAGAAA 1801
Query 101043 CGCCCTTTTGCGGTTTTTGTATTGCGGCCCAGGGATCGTGAATGGCGACTTTGAAATCTG 101102
||||||||| ||||| || | ||||||||||| || ||||||| |||||||| |||
Sbjct 1800 GGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACACTTTGAAGTCTT 1741
Query 101103 AACGACCCTTGCAGGAGCGCTGCAGCGCTTCAAAACTGCCGGGAATGGTTTTGAGGGCGT 101162
|| || ||||||| ||||| || || | |||||||| ||| || || ||
Sbjct 1740 CGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATCTCCTTCAGACTGT 1681
Query 101163 CGTTGAGGCCGTCGCCGCCGCAAATGGGTATGAACCCGTACAACAGATGCGAGAGATTGG 101222
|||||| ||||||||| ||||| || || |||||||||||||||| || | |||||||
Sbjct 1680 CGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAGTGAGTCAGATTGG 1621
Query 101223 GCAGCGGCACTTTGTCTACCGGAAAATTGCGGCCGTACACGCCCCACTCTACAAAATACG 101282
| | |||||| ||| || || || || | ||||| ||||| ||||| || || |
Sbjct 1620 GGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACTCCCCATTCTACGAAGTAAG 1561
Query 101283 C 101283
|
Sbjct 1560 C 1560
>seq131720
Length=1042
Score = 138 bits (152), Expect = 9e-28
Identities = 429/653 (66%), Gaps = 26/653 (4%)
Strand=Plus/Minus
Query 100112 TTCATAGCATTTAACAAGTCGCCGTTGTCGGCGTCGATTTCCCAAGCGAATAACCCGCCC 100171
||||||||||| || | ||| || ||||| ||||| |||||||| ||||| || || |||
Sbjct 669 TTCATAGCATTCAATATGTCACCATTGTCCGCGTCAATTTCCCACGCGAACAAACCACCC 610
Query 100172 AATCCGTTTTGATCT-ACATAACTATTTTTTGCTAATACAGAATCGACACTGTCAAAAGA 100230
||| ||| | ||| || || | ||| ||| || || | || ||| | |
Sbjct 609 AATTTGTTATT-TCTGACGTATTTGCCTTTCTCTATAACTGATCTGGCATCGTCGTACGT 551
Query 100231 GATTAAATCGCCCTTGTCTTTGTTAAAAACGTAAGCCGCTTTAGCGACCGAATCAAATTT 100290
|||| ||| || || | || | || ||||| | ||||| || ||| |||| | |
Sbjct 550 TATTAGATCTCCGGTGGCCTTCCTGAACACGTATGGCGCTTGTGCCACCTTATCATAATG 491
Query 100291 GTAA----ATGTACTTGTT-CAAT-TCGTTTTCAATTTGGCGATAATCGACAACGCCGTC 100344
||| || | | | | || || | | | |||| | || || || || || ||
Sbjct 490 GTACTCCCATTTCCCAGCAGCTATATCATCTGCTATTTCTCTGTAGTCCACCACACCATC 431
Query 100345 TTCCCAAGTGCCGGTCACGGGCCCGGCAGCTGTGCCTGTGAAATAGTTGTCACCGTCATA 100404
|| |||||| || | || || || | || |||| |||||| |||||||| |||||
Sbjct 430 TTGCCAAGTACCTTTAACAGGACCCGTTGCATTGCCAGTGAAAGGATTGTCACCTTCATA 371
Query 100405 GCCCGCCACGCCTGTCCAACCGCGGCCGTACATGGCAACGCCCACAATAATTTTGCGCGG 100464
|| || || ||||| || || |||||||||||||| || || | ||| || ||
Sbjct 370 ACCGTGGACACCGGTCCAGCCACGTCCGTACATGGCAACACCAACCACAATCTTCTTAGG 311
Query 100465 GTCCACGCCCTGGTTCGTGAGCA---ATTTCACGGCGTGATCCGTGTTGTACAGCTCGTT 100521
| ||| || || || | || |||||||| || ||| || |||| ||| ||
Sbjct 310 ATTCACACCTTG---CGCCAACAAGTATTTCACGCCGAAATCAGTCGTGTAAGTCTCCTT 254
Query 100522 CGGGTTCCAACTCGGCGCGTAGAGAGTGGTTTGGTAGCCCAA----ATCGGTGTTTGACC 100577
||| | |||| || ||||| |||| | |||| | |||| ||| || ||||
Sbjct 253 CGGCTGCCAAGATGGAGCGTACAGAGAAGCCTGGT-GACCAAGAGTATC---ATTGGACC 198
Query 100578 AGGCGCCTTTAAAATCGTAGCTCATAAGAAATATTTTATCGAGAAGCTTTTGCGCAACGT 100637
| || || || |||||||||||||| | ||||| | || | || ||||| ||
Sbjct 197 ACGCTCCCTTGAAATCGTAGCTCATGAAGAATATGTGGTCCATGTATTTCTGCGCTGCGC 138
Query 100638 CGTACTGTACCACAGCAATTTTGTCATAGCCGGAACTGATTGCGCTTGTCAACTCGTACG 100697
||| | || || || ||||| | || | |||||| || |||||||||||
Sbjct 137 TGTAATCGACGACTTGGATCTTGTCCCAACCAGCACTGATGGCAGACGTCAACTCGTATT 78
Query 100698 TTTTGCCCGTTT--GCAGTTGTAGCTGGTCCAGCATCGCGCGCAATTCCTTCA 100748
| | || |||| |||| |||| || || |||| |||||| ||||||||
Sbjct 77 TCCTTCCAGTTTCCGCAG--AGAGCTCGTTCAACATCTCGCGCAGTTCCTTCA 27
>seq67196
Length=1848
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898
|| || || || || ||||||||||||||||| | || || | |||| |||| |||
Sbjct 720 TGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCGTCTTCCAACTGC 779
Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958
|| || ||| |||| || | ||||||||| ||| | || |||||||| ||| ||
Sbjct 780 TTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCCTGAATCTTA 839
Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTT 19018
||| || | ||| |||||| ||| || ||| | ||| || ||||| || ||
Sbjct 840 GCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGATCGTTTTTCCAGTC 899
Query 19019 AAAGTTTTGACAAAAATTTGCATTTTAAATCT 19050
|||||||| || ||||| |||||| | |||||
Sbjct 900 AAAGTTTTCACGAAAATCTGCATTATGAATCT 931
>seq15021
Length=1916
Score = 102 bits (112), Expect = 7e-17
Identities = 166/239 (69%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 18812 TTTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCC 18871
|| ||||||| | ||||||||||| ||| | ||||| || || ||||||||||||||
Sbjct 957 TTACCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCA 898
Query 18872 GCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACG 18931
| | ||| | |||| |||| |||||||| ||| | || | || || |||||
Sbjct 897 GAAAGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGA 838
Query 18932 GGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCC 18991
|| | |||||||| || ||| || ||| || | | | ||| ||| || ||||
Sbjct 837 GGAATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCC 778
Query 18992 GTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTTAAATCT 19050
|| | ||| ||||| || || |||| ||||| || || || |||||| |||| ||
Sbjct 777 ACCTCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCATTGTAAAACT 719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 413324488003822
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |