Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq67196 111 1e-19 seq15021 96.9 2e-15 >seq67196 Length=1848 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 33166 ATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTG 33225 ||| || || || |||||||| ||||||||||| |||||| | | ||| ||||| || Sbjct 719 ATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCGTCTTCCAACTG 778 Query 33226 CTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGC 33285 ||||||| ||| || | ||| ||||| || | ||| || |||||||| || |||| Sbjct 779 CTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCCTGAATCTT 838 Query 33286 CTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGT 33345 ||| || | | || || || |||| || |||| || ||||||||||| || Sbjct 839 AGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGATCGTTTTTCCAGT 898 Query 33346 AAGAGTTTTTACGAAAATTTGCAT 33369 | |||||| |||||||| ||||| Sbjct 899 CAAAGTTTTCACGAAAATCTGCAT 922 >seq15021 Length=1916 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| | || |||||||| || | || || ||||| || |||||||||||||| Sbjct 955 ACCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGA 896 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | || | ||| |||||||| || ||| ||| || || ||||| || || | || Sbjct 895 AAGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGG 836 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || || ||||| || |||| ||| || ||| || |||||| | | || Sbjct 835 AATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCAC 776 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || ||||| || ||||||||||| || ||||| Sbjct 775 CTCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCAT 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 317817735044574