Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq15021 105 5e-18 seq67196 91.5 1e-13 >seq15021 Length=1916 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||||||||| | ||||||||||| || || || ||||| |||||||| ||||| Sbjct 955 ACCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGA 896 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 | | || | || ||||||||||| || ||||| ||||| ||||| || || |||| Sbjct 895 AAGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGG 836 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||| ||||||||| ||| || ||| || | | | ||| || | | |||||| Sbjct 835 AATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCAC 776 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || || || || |||| || || || ||||| ||||| Sbjct 775 CTCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCAT 728 >seq67196 Length=1848 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||| | | || || || | ||||| ||| |||||||||||||| ||||| Sbjct 695 ACCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGA 754 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || ||| | || ||||| || ||||| ||||| |||| || ||||| || | || Sbjct 755 CAAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGG 814 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||| || ||| || ||| || | | | |||||||| || || || Sbjct 815 GATACCTTCTTTGTCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGAC 874 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||| || || ||||| ||||| || || ||||| Sbjct 875 TTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCAT 922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353709336153324