Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq131719 251 6e-62 seq174000 111 1e-19 seq131720 104 2e-17 seq67196 96.9 3e-15 seq193007 87.8 2e-12 >seq131719 Length=2163 Score = 251 bits (278), Expect = 6e-62 Identities = 361/503 (72%), Gaps = 8/503 (2%) Strand=Plus/Minus Query 101475 TGCCGAGTGTTGGGTTGGCGCCTTTACCACCCGGAAACTCCCAATCGATGTCTACCCCGT 101534 ||||||| | ||||| ||||||||||| || || |||||||||||||| || || |||| Sbjct 2058 TGCCGAGATTGGGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGT 1999 Query 101535 CAAAAAATTTCCAAACCTGCAAAAATTCTTTGACAGAATCCAC-AAACA--CACGCCGTT 101591 |||| |||||||| ||| | || ||||| || ||| | || |||| ||||| | Sbjct 1998 CAAAGAATTTCCAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGC---T 1942 Query 101592 TTATCGCGTC-GTGCATATAATAGAACGGGTCGGACAATGTCCAGCCGCCGATGGACGGC 101650 || || ||| ||| | | || |||| || || | ||| ||||||||||||| ||| ||| Sbjct 1941 TTGTCTTGTCAGTGAAGAAAA-AGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGC 1883 Query 101651 AAAATTTTAAGGTGTGGATTGGCCAATTTGGCCGCCATTAGCTGACCAAAGTTGCCTTTG 101710 ||||| || |||| ||| | ||| ||| | ||| || || || ||||| |||||| Sbjct 1882 AAAATCTTGAGGTCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTG 1823 Query 101711 TAGGGCTCGTTCCAAGCAGATACACCTTTCTGCGGTTTTTGTATTGCGGCCCAAGGATCG 101770 || || |||||||| | ||| | || || || ||||| || | |||||||| || || Sbjct 1822 TAAGGTTCGTTCCATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCA 1763 Query 101771 TGGATAGCAACTTTAAAATCTGAACGGCCCTGGCAAGAACGTTGCAACGCTTCAAAACTA 101830 || || | ||||| || ||| ||||| ||| ||||| || | || | ||||| Sbjct 1762 TGAATGGACACTTTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTG 1703 Query 101831 CCGGGTATGGTTTTGAGGGCGTCGTTAAGGCCATCGCCGCCACAAATGGGTATGAACCCG 101890 || || || || |||||| | ||| ||||| || || || || ||||||||| Sbjct 1702 CCCTCAATCTCCTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCG 1643 Query 101891 TACAACAAATGTGAGAGGTTGGGCAGCGGCACTTTGTCCACCGGAAAGTTGCGACCATAC 101950 |||||||| || | || ||||| | |||||| |||||| || || || | |||| Sbjct 1642 TACAACAAGTGAGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATAC 1583 Query 101951 ACGCCCCATTCTACAAAATACGC 101973 || ||||||||||| || || || Sbjct 1582 ACTCCCCATTCTACGAAGTAAGC 1560 >seq174000 Length=6590 Score = 111 bits (122), Expect = 1e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 23537 TTGCACGTAGTCGTAGCCCTTTACGAGCCGCACGTATGTGCAGCGATCAAACCAACGTGC 23596 ||| ||||| || | |||||||| ||| | | || | || ||| ||||| ||||| Sbjct 2914 TTGGACGTAATCTTTACCCTTTACAAGCTGGAGATAGGCACATCGACTGAACCATCGTGC 2973 Query 23597 GTGTTCTTCCCACGGCTCGTCGGTGCTTTCCCAGTCTTTGAGGCCGCCGTCGCAATGAAA 23656 ||||||||||||||| ||| | ||||||| ||||| || |||||||| |||| ||| Sbjct 2974 GTGTTCTTCCCACGGTATGTCATCGTTTTCCCAATCTTTAAGACCGCCGTCACAATAAAA 3033 Query 23657 ACATTTGACCCTGTCACCCTTGCCGGTGTAATAAAAACCGGCTTCAGCTAA 23707 |||||| | ||||||| | || || ||| | || ||||| || ||||| Sbjct 3034 GCATTTGGTCTTGTCACCTTGTCCTGTATAAAAGAAGCCGGCCTCGGCTAA 3084 >seq131720 Length=1042 Score = 104 bits (114), Expect = 2e-17 Identities = 278/423 (66%), Gaps = 4/423 (1%) Strand=Plus/Minus Query 101018 TAATCGACAACGCCGTCTTCCCAAGTACCGGTCACGGGCCCGGCAGCTGTGCCTGTGAAA 101077 || || || || || |||| ||||||||| | || || || | || |||| |||||| Sbjct 447 TAGTCCACCACACCATCTTGCCAAGTACCTTTAACAGGACCCGTTGCATTGCCAGTGAAA 388 Query 101078 TAGTTGTCACCGTCATAGCCTGCCACGCCTGTCCAACCGCGGCCGTACATGGCAACGCCC 101137 |||||||| ||||| || || || ||||| || || |||||||||||||| || Sbjct 387 GGATTGTCACCTTCATAACCGTGGACACCGGTCCAGCCACGTCCGTACATGGCAACACCA 328 Query 101138 ACAATAATTTTGCGCGGGTCTACGCCCTGGTTCGTGAGCGATTTAACAGCGTAATCCGTG 101197 || | ||| || || | || || || | | |||| || || |||| || Sbjct 327 ACCACAATCTTCTTAGGATTCACACCTTGCGCCAACAAGTATTTCACGCCGAAATCAGTC 268 Query 101198 TTGTACAGCTCGTTTGGGTTCCAACTCGGCGCGTAGAGTGTAGTTTGATAGCCCAGATCG 101257 |||| ||| || || | |||| || ||||| || | || || | || ||| Sbjct 267 GTGTAAGTCTCCTTCGGCTGCCAAGATGGAGCGTACAGAGAAGCCTGGTGACCAAGAGTA 208 Query 101258 ATGTTTGACCACGCGCCTTTGAAATCGTAGCTCATGAGAAATATTTTATCGAGGAACTTT 101317 || |||||||| || ||||||||||||||||||| ||||| | || | | | || Sbjct 207 TCATTGGACCACGCTCCCTTGAAATCGTAGCTCATGAAGAATATGTGGTCCATGTATTTC 148 Query 101318 TGCGCAAGATCGTATTTTACTACAGCAATTTTGTCGTGACCCGAACTAATTGCACTTGTT 101377 ||||| ||| | || || || ||||| ||| | ||| || ||| || Sbjct 147 TGCGCTGCGCTGTAATCGACGACTTGGATCTTGTCCCAACCAGCACTGATGGCAGACGTC 88 Query 101378 AATTCGTATGTTTTGCCCGTTT--GCAGTTGCAACTCGTCCAGCATTGCGCGCAATTCTT 101435 || |||||| | | || |||| |||| | ||||| || ||| |||||| ||| | Sbjct 87 AACTCGTATTTCCTTCCAGTTTCCGCAG--AGAGCTCGTTCAACATCTCGCGCAGTTCCT 30 Query 101436 TCA 101438 ||| Sbjct 29 TCA 27 >seq67196 Length=1848 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064 ||||| || ||||||||||| || |||||||| || ||| |||||||| || Sbjct 719 ATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCGTCTTCCAACTG 778 Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124 || || ||| |||| || | ||| ||||| ||| | ||||||||||| ||| || Sbjct 779 CTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCCTGAATCTT 838 Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184 ||| || | | | || ||| |||||| ||||| ||| || ||||| || || Sbjct 839 AGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGATCGTTTTTCCAGT 898 Query 20185 CAACGTTTTGACAAAAATTTGCATTTTTAAACT 20217 ||| ||||| || ||||| |||||| | || || Sbjct 899 CAAAGTTTTCACGAAAATCTGCATTATGAATCT 931 >seq193007 Length=659 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--ATCTT 20057 ||||| || | |||||||||||| || || ||||| ||| ||||| | | ||||| Sbjct 422 ACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGG--ATAGTGTGCGTCCATCTT 479 Query 20058 CCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGG 20117 | | |||||| || ||| | ||||| | |||||| || ||| | ||||||||||| Sbjct 480 CAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTT 539 Query 20118 CAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTT 20177 |||||| ||| || | ||| || || ||||| ||| | || || |||| Sbjct 540 GAATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTT 599 Query 20178 TGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || | || |||||||| || ||||| Sbjct 600 TGCCAGTAAGTGTCTTGACAAAGATCTGCAT 630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418323789242703