Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 251 6e-62
seq174000 111 1e-19
seq131720 104 2e-17
seq67196 96.9 3e-15
seq193007 87.8 2e-12
>seq131719
Length=2163
Score = 251 bits (278), Expect = 6e-62
Identities = 361/503 (72%), Gaps = 8/503 (2%)
Strand=Plus/Minus
Query 101475 TGCCGAGTGTTGGGTTGGCGCCTTTACCACCCGGAAACTCCCAATCGATGTCTACCCCGT 101534
||||||| | ||||| ||||||||||| || || |||||||||||||| || || ||||
Sbjct 2058 TGCCGAGATTGGGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGT 1999
Query 101535 CAAAAAATTTCCAAACCTGCAAAAATTCTTTGACAGAATCCAC-AAACA--CACGCCGTT 101591
|||| |||||||| ||| | || ||||| || ||| | || |||| ||||| |
Sbjct 1998 CAAAGAATTTCCAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGC---T 1942
Query 101592 TTATCGCGTC-GTGCATATAATAGAACGGGTCGGACAATGTCCAGCCGCCGATGGACGGC 101650
|| || ||| ||| | | || |||| || || | ||| ||||||||||||| ||| |||
Sbjct 1941 TTGTCTTGTCAGTGAAGAAAA-AGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGC 1883
Query 101651 AAAATTTTAAGGTGTGGATTGGCCAATTTGGCCGCCATTAGCTGACCAAAGTTGCCTTTG 101710
||||| || |||| ||| | ||| ||| | ||| || || || ||||| ||||||
Sbjct 1882 AAAATCTTGAGGTCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTG 1823
Query 101711 TAGGGCTCGTTCCAAGCAGATACACCTTTCTGCGGTTTTTGTATTGCGGCCCAAGGATCG 101770
|| || |||||||| | ||| | || || || ||||| || | |||||||| || ||
Sbjct 1822 TAAGGTTCGTTCCATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCA 1763
Query 101771 TGGATAGCAACTTTAAAATCTGAACGGCCCTGGCAAGAACGTTGCAACGCTTCAAAACTA 101830
|| || | ||||| || ||| ||||| ||| ||||| || | || | |||||
Sbjct 1762 TGAATGGACACTTTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTG 1703
Query 101831 CCGGGTATGGTTTTGAGGGCGTCGTTAAGGCCATCGCCGCCACAAATGGGTATGAACCCG 101890
|| || || || |||||| | ||| ||||| || || || || |||||||||
Sbjct 1702 CCCTCAATCTCCTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCG 1643
Query 101891 TACAACAAATGTGAGAGGTTGGGCAGCGGCACTTTGTCCACCGGAAAGTTGCGACCATAC 101950
|||||||| || | || ||||| | |||||| |||||| || || || | ||||
Sbjct 1642 TACAACAAGTGAGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATAC 1583
Query 101951 ACGCCCCATTCTACAAAATACGC 101973
|| ||||||||||| || || ||
Sbjct 1582 ACTCCCCATTCTACGAAGTAAGC 1560
>seq174000
Length=6590
Score = 111 bits (122), Expect = 1e-19
Identities = 127/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 23537 TTGCACGTAGTCGTAGCCCTTTACGAGCCGCACGTATGTGCAGCGATCAAACCAACGTGC 23596
||| ||||| || | |||||||| ||| | | || | || ||| ||||| |||||
Sbjct 2914 TTGGACGTAATCTTTACCCTTTACAAGCTGGAGATAGGCACATCGACTGAACCATCGTGC 2973
Query 23597 GTGTTCTTCCCACGGCTCGTCGGTGCTTTCCCAGTCTTTGAGGCCGCCGTCGCAATGAAA 23656
||||||||||||||| ||| | ||||||| ||||| || |||||||| |||| |||
Sbjct 2974 GTGTTCTTCCCACGGTATGTCATCGTTTTCCCAATCTTTAAGACCGCCGTCACAATAAAA 3033
Query 23657 ACATTTGACCCTGTCACCCTTGCCGGTGTAATAAAAACCGGCTTCAGCTAA 23707
|||||| | ||||||| | || || ||| | || ||||| || |||||
Sbjct 3034 GCATTTGGTCTTGTCACCTTGTCCTGTATAAAAGAAGCCGGCCTCGGCTAA 3084
>seq131720
Length=1042
Score = 104 bits (114), Expect = 2e-17
Identities = 278/423 (66%), Gaps = 4/423 (1%)
Strand=Plus/Minus
Query 101018 TAATCGACAACGCCGTCTTCCCAAGTACCGGTCACGGGCCCGGCAGCTGTGCCTGTGAAA 101077
|| || || || || |||| ||||||||| | || || || | || |||| ||||||
Sbjct 447 TAGTCCACCACACCATCTTGCCAAGTACCTTTAACAGGACCCGTTGCATTGCCAGTGAAA 388
Query 101078 TAGTTGTCACCGTCATAGCCTGCCACGCCTGTCCAACCGCGGCCGTACATGGCAACGCCC 101137
|||||||| ||||| || || || ||||| || || |||||||||||||| ||
Sbjct 387 GGATTGTCACCTTCATAACCGTGGACACCGGTCCAGCCACGTCCGTACATGGCAACACCA 328
Query 101138 ACAATAATTTTGCGCGGGTCTACGCCCTGGTTCGTGAGCGATTTAACAGCGTAATCCGTG 101197
|| | ||| || || | || || || | | |||| || || |||| ||
Sbjct 327 ACCACAATCTTCTTAGGATTCACACCTTGCGCCAACAAGTATTTCACGCCGAAATCAGTC 268
Query 101198 TTGTACAGCTCGTTTGGGTTCCAACTCGGCGCGTAGAGTGTAGTTTGATAGCCCAGATCG 101257
|||| ||| || || | |||| || ||||| || | || || | || |||
Sbjct 267 GTGTAAGTCTCCTTCGGCTGCCAAGATGGAGCGTACAGAGAAGCCTGGTGACCAAGAGTA 208
Query 101258 ATGTTTGACCACGCGCCTTTGAAATCGTAGCTCATGAGAAATATTTTATCGAGGAACTTT 101317
|| |||||||| || ||||||||||||||||||| ||||| | || | | | ||
Sbjct 207 TCATTGGACCACGCTCCCTTGAAATCGTAGCTCATGAAGAATATGTGGTCCATGTATTTC 148
Query 101318 TGCGCAAGATCGTATTTTACTACAGCAATTTTGTCGTGACCCGAACTAATTGCACTTGTT 101377
||||| ||| | || || || ||||| ||| | ||| || ||| ||
Sbjct 147 TGCGCTGCGCTGTAATCGACGACTTGGATCTTGTCCCAACCAGCACTGATGGCAGACGTC 88
Query 101378 AATTCGTATGTTTTGCCCGTTT--GCAGTTGCAACTCGTCCAGCATTGCGCGCAATTCTT 101435
|| |||||| | | || |||| |||| | ||||| || ||| |||||| ||| |
Sbjct 87 AACTCGTATTTCCTTCCAGTTTCCGCAG--AGAGCTCGTTCAACATCTCGCGCAGTTCCT 30
Query 101436 TCA 101438
|||
Sbjct 29 TCA 27
>seq67196
Length=1848
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064
||||| || ||||||||||| || |||||||| || ||| |||||||| ||
Sbjct 719 ATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCGTCTTCCAACTG 778
Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124
|| || ||| |||| || | ||| ||||| ||| | ||||||||||| ||| ||
Sbjct 779 CTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCCTGAATCTT 838
Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184
||| || | | | || ||| |||||| ||||| ||| || ||||| || ||
Sbjct 839 AGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGATCGTTTTTCCAGT 898
Query 20185 CAACGTTTTGACAAAAATTTGCATTTTTAAACT 20217
||| ||||| || ||||| |||||| | || ||
Sbjct 899 CAAAGTTTTCACGAAAATCTGCATTATGAATCT 931
>seq193007
Length=659
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--ATCTT 20057
||||| || | |||||||||||| || || ||||| ||| ||||| | | |||||
Sbjct 422 ACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGG--ATAGTGTGCGTCCATCTT 479
Query 20058 CCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGG 20117
| | |||||| || ||| | ||||| | |||||| || ||| | |||||||||||
Sbjct 480 CAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTT 539
Query 20118 CAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTT 20177
|||||| ||| || | ||| || || ||||| ||| | || || ||||
Sbjct 540 GAATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTT 599
Query 20178 TGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
|||| || | || |||||||| || |||||
Sbjct 600 TGCCAGTAAGTGTCTTGACAAAGATCTGCAT 630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418323789242703
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |