Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq67196 197 3e-45
seq15021 190 5e-43
seq193007 172 1e-37
>seq67196
Length=1848
Score = 197 bits (218), Expect = 3e-45
Identities = 171/212 (81%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
||||| ||||| || |||||||||||||||||||| ||||||||||| || | || |||
Sbjct 27 AGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTGCGCCCATCT 86
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| |||||||| ||||| ||||| || ||||| || || || || || || || |||||
Sbjct 87 TCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGGATCCCCTCCTTATCT 146
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| ||||||||||| || | || || || ||||||||||| ||||||||
Sbjct 147 TGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTACCTCTAGAGTAATAGTT 206
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|||||||| | ||||| ||||| ||||||||
Sbjct 207 TTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238
Score = 188 bits (208), Expect = 2e-42
Identities = 169/212 (80%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
||||||||||| || |||||||||||||||||||| ||||||||||| || | || |||
Sbjct 483 AGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTACGCCCATCT 542
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| |||||||| ||||||||||| | ||||| || || || || || ||||| |||||
Sbjct 543 TCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGGATCCCTTCCTTATCT 602
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
||||| || || || || ||||| | || || || || || || |||||||||||
Sbjct 603 TGAATTTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCAACTTCAAGTGTAATAGTT 662
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| |||||||| ||||| ||||| ||||||||
Sbjct 663 TTGCCAGTAAGGGTTTTAACAAAGATCTGCAT 694
Score = 179 bits (198), Expect = 8e-40
Identities = 165/209 (79%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|| ||||| | || |||||||| || ||||||||||||||||| || | || |||||
Sbjct 258 ACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGTGCGGCCATCTTCA 317
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
|| |||||||||||||| || || | |||||||| || || || ||||| |||||||||
Sbjct 318 AGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACCTTCCTTATCCTGA 377
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
||||| ||||| |||||||| | ||| || || || || ||||| || ||||| |||
Sbjct 378 ATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAGAGTGATAGTTTTA 437
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| | ||||| ||||| ||||||||
Sbjct 438 CCAGTCAAGGTTTTAACAAAGATCTGCAT 466
Score = 156 bits (172), Expect = 1e-32
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || |||||||| || |||||||| |||||||| || || || | ||| | ||||||
Sbjct 711 AGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCGTCT 770
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| | || |||||||||||||| || | ||| ||||| || || || |||||||| |||
Sbjct 771 TCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCC 830
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| ||||| || || || | ||||| |||||| || || | || || ||
Sbjct 831 TGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGATCGTT 890
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|| ||||| | ||||| || || ||||||||| ||
Sbjct 891 TTTCCAGTCAAAGTTTTCACGAAAATCTGCATTATG 926
>seq15021
Length=1916
Score = 190 bits (210), Expect = 5e-43
Identities = 179/228 (79%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||| ||||| | || | || | |||||||||||||||||||| || |||||
Sbjct 954 CCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAA 895
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
|| || | |||||||| | |||||| |||||||| || | | ||||||||||||||
Sbjct 894 AGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGA 835
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| || |||||||| |||||||| ||||| |||||||||| || ||| || || |||
Sbjct 834 ATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACC 775
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
||||| || || ||||| || || || |||||||| ||||||||||||
Sbjct 774 TCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCATT 727
>seq193007
Length=659
Score = 172 bits (190), Expect = 1e-37
Identities = 160/203 (79%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| ||||||||||||||||| ||||| ||||| ||||| || | || ||||| ||||||
Sbjct 428 TGCAATGTAGATTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTCAAGTTGT 487
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
||||||||||| || || | |||||| || || || || |||||||| || ||||| ||
Sbjct 488 TTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGAATTTTG 547
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
||||| ||||| || | || || ||||| || |||| || ||||| || ||||||
Sbjct 548 GCTTTGACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTTTGCCAGTA 607
Query 104537 AGTGTTTTTACAAATATCTGCAT 104559
||||| || ||||| ||||||||
Sbjct 608 AGTGTCTTGACAAAGATCTGCAT 630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1147753654481604
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |