Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 143 2e-29
seq67196 82.4 6e-11
>seq131719
Length=2163
Score = 143 bits (158), Expect = 2e-29
Identities = 402/609 (66%), Gaps = 15/609 (2%)
Strand=Plus/Plus
Query 30231 TTACTTTGTAGAGTGGGGTGTTTACGACAGACAATATCCAGCAGACTTAGTTCCCGTCCC 30290
|||||| ||||| ||||| || || || | | || | ||| || || ||||
Sbjct 1562 TTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATCCC 1621
Query 30291 CAACCTTACGCATCTTTTGTATGGCTTTGTGCCTCTCTGCGGTGGAGATGGTATAAACGA 30350
||| || || || | ||||| || || | || ||||||| || || || || |||||
Sbjct 1622 CAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAACGA 1681
Query 30351 TAGCTTAAAGCAAGTGCCGGGTTCGTTTGAGGCTTTACAAAAATCTTGCGCGGGTCGAGA 30410
|| | ||| | | ||| || |||| | || || ||| || || ||
Sbjct 1682 CAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGCGA 1741
Query 30411 GGATTTTAAAGTGACGATTCACGATATTTGGGGCGCTCTTCAAAAACCACAAAAAGGAGT 30470
|| || |||||| | ||||| || |||| ||||||||| ||||||||||| || |
Sbjct 1742 AGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGCCT 1801
Query 30471 GGGCGCTTGGGACGATCCGTATAAAGGAAATTTTGGCCAACTGATGGCGATTAAA-AGAC 30529
| ||| |||| || || |||||||| || |||||||||||| | | ||| || |
Sbjct 1802 TTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAGGC 1861
Query 30530 ACAATCCCGACCTTACGATTTTACCGTCTATTGGCGGGTGGACACTTAGC-GACCCTTTC 30588
| || ||||| | |||||| || || | ||||| ||||| || || || || |||
Sbjct 1862 -GAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGAC-TTTGGCTGATCCATTC 1919
Query 30589 TTTAAATTGAGTTCTGCCGA---AAATCGCGCCGTTTTCGTTGAGTCCGCACGAGAGTAT 30645
||| || | ||| | | ||| || | | |||||||| |||| | ||| |
Sbjct 1920 TTTTTCTTCA---CTGACAAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAAGACTTC 1976
Query 30646 TTGCGCACATGGAAATTTTTTGACGGACTAGACATCGACTGGGAGTTTCCGGGCGGTAAA 30705
| | || |||||||| |||||||| | || ||||| |||||||| || || ||||||
Sbjct 1977 CTCCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAAA 2036
Query 30706 GGTGCTAATCCCGAATTAGG-AGATCCAGAAAAGGATGGAGTAACATATGTGCAGTTATT 30764
|| ||||| ||| | | || || || ||||| |||| || || || | | |
Sbjct 2037 GGCGCTAACCCCAATCTCGGCAGGCCC----AAGGACGGAGAAATCTACGTACTTCTGAT 2092
Query 30765 GAAAGAGCTCAGAGAAATGCTAAACGATCTTTCTAAAGAAACAGGGAAAAAATACCAGCT 30824
||| || || | || ||| | ||||| || || ||||| || | |||||| || |
Sbjct 2093 GAAGGAACTGCGCGAGATGTTGAACGAGCTCTCGGCGGAAACTGGAAGGAAATACGAGTT 2152
Query 30825 CACCTCGGC 30833
|| || ||
Sbjct 2153 GACGTCTGC 2161
>seq67196
Length=1848
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||||||||| | | || || | ||| | ||| || |||||||| |||||||| |
Sbjct 695 ACCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGA 754
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || |||| |||| |||||| || | |||| | |||||||||||| ||
Sbjct 755 CAAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGG 814
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAG-ACGCTATGGTATCGGTAGACTCCG 48677
| || ||| |||||| ||| || |||| | | | | || ||||| | || ||
Sbjct 815 GATACCTTCTTTGTCCTGAATCTT-AGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGA 873
Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | || || ||||| || || | ||||||||| |||||||||||
Sbjct 874 CTTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCAT 922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419982778805063
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |