Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq193007 131 2e-25 seq67196 114 1e-20 seq15021 104 2e-17 >seq193007 Length=659 Score = 131 bits (144), Expect = 2e-25 Identities = 158/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGG--AATCCT 94856 ||||||||||| |||||||| || || | || || ||| ||||||| | ||| | Sbjct 422 ACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCG--GATAGTGTGCGTCCATCTT 479 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || |||||||| ||||||| | | || || ||||| ||||||||||||||||| | Sbjct 480 CAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTT 539 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 |||||| || ||||| | | |||||| | | || || || | ||||| |||| Sbjct 540 GAATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTT 599 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | |||||||| || || |||||||||||||||| Sbjct 600 TGCCAGTAAGTGTCTTGACAAAGATCTGCATGC 632 >seq67196 Length=1848 Score = 114 bits (126), Expect = 1e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| || ||||| ||||| ||||| | || ||||| || ||| | || |||| Sbjct 715 CAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCGTCTTCCA 774 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 ||| ||||| |||| || | | ||||||||||| || |||||||||||||| | || Sbjct 775 ACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCCTGAA 834 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 | || || || ||| ||| ||| || | | ||||| || | ||||| ||||||| Sbjct 835 TCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGATCGTTTTTC 894 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| | ||||||||| || |||||||| Sbjct 895 CAGTCAAAGTTTTCACGAAAATCTGCAT 922 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||| || | || ||||| ||||| | ||||| || | ||| | | Sbjct 252 CGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGTGCGGCCA 311 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || ||||||||||| ||||||| | | ||| |||||||| ||||||||||| || Sbjct 312 TCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACCTTCCTTA 371 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || || ||||| | | ||||||| | || || || | ||||| Sbjct 372 TCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAGAGTGATA 431 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| | ||||| |||||||||||||| Sbjct 432 GTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466 Score = 104 bits (114), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 94805 TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCT 94862 |||||||||||||| || || | || || || |||| || | ||| || || | Sbjct 492 TGCAAAGTAGATTCTTTCTGAATATTGTAGTCAG--ATAGGGTACGCCCATCTTCAAGTT 549 Query 94863 GTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTT 94922 |||| || |||| || | ||| ||||| ||||| || || ||||| || || | ||||| Sbjct 550 GTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGGATCCCTTCCTTATCTTGAATTT 609 Query 94923 TTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAG 94982 | ||||| ||| | | ||||| | | || || |||| || || ||||| |||| Sbjct 610 TAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCAACTTCAAGTGTAATAGTTTTGCCAG 669 Query 94983 TAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| |||||||||||||| Sbjct 670 TAAGGGTTTTAACAAAGATCTGCAT 694 >seq15021 Length=1916 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||| | | ||||||||||| | ||||||||| || || | || ||||| Sbjct 954 CCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAA 895 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | || |||| ||||| || ||||||| |||| ||| ||||| |||||| Sbjct 894 AGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGA 835 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| ||||| || | ||| || || || || | | |||||| | || || Sbjct 834 ATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACC 775 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || || || || ||||| || || |||||||| Sbjct 774 TCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCAT 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446906747890680