Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq172202 172 9e-39
>seq172202
Length=2148
Score = 172 bits (190), Expect = 9e-39
Identities = 331/483 (69%), Gaps = 25/483 (5%)
Strand=Plus/Minus
Query 19394 GTAAGTGAAGGACGTGACACCTAGAGATATTGTTTCTATATACTAA----ACTATTAT-T 19448
|| ||||||||||||| || || || |||| |||| ||| ||| ||| |
Sbjct 470 GTGAGTGAAGGACGTGTCAACTTGATTTATT-------TATAATAATTGGACTTGTATAT 418
Query 19449 TAGCCG-TAACAATGGAT-CGGACTATTGATGAGCTCAAATACGCAGACTTCATGGCGCT 19506
| | || | || |||| | || |||| | || || |||||||| ||||||||||||||
Sbjct 417 TTGACGATCACCATGGCTACGCCCTATA-AGGATCTGAAATACGCTGACTTCATGGCGCT 359
Query 19507 GATGGAGTGCAGTGACTGCGAAGTACTAATTGGTGAGGAGCATCAGAAGGTTATCAGTGA 19566
||||| ||||| ||| |||||| | |||| |||||| | | |||||||| ||
Sbjct 358 AATGGAATGCAGGGACCGCGAAGAAGTAATCAAAACCGAGCATAAACAAGTTATCAGCGA 299
Query 19567 GAAGATACAAGGGACGTATGAAGCCGAAAAAGCTAACAGAAATC-----TAAACCGCTAT 19621
|||||| || || | ||||||| ||| || | || || | || || |
Sbjct 298 GAAGATCTCCGGAACCTTTGAAGCC-----AGCGAAAACAACTCGTGCTTGAATCGATTC 244
Query 19622 GCAAATGCGGTTTGCTTCGATCACTCCAGAGTAATTTTACCGACAGAGCGAAATCGGGGG 19681
| || ||||| || |||||||||||||| |||| || | || ||||||||
Sbjct 243 GGCCATTGTGTTTGTTTTGATCACTCCAGAGTGGTTTTGCCAAATGAAAAGAATCGGGGA 184
Query 19682 AACTACATTAACGCCAATTATGTAGATGGCTTCGAACGTAGCAAGAAGTTCATCTGCGGA 19741
| || || || || || |||||| |||| || | | | || || ||||| || |||
Sbjct 183 ACATATATCAATGCGAACTATGTAAATGGATTTGCATACAAGAATAAATTCATATGTGGA 124
Query 19742 CAAGCTCCAACCCGACGTACGTGTTACGATTTCTATCGTATGTTGTGGATGGAGCATGTG 19801
| || ||||||| ||| || |||| |||| || || ||| | ||||||||||||||
Sbjct 123 GAGGCCCCAACCCAACGCACTAGTTATAATTTTTACCGAATGATATGGATGGAGCATGTA 64
Query 19802 CAAATCGTTGTCATGCTCTGCAAGAAGAAAGAAAATGGCAGGGAAAAGTGTCACCCCTAC 19861
||| | ||||||||||||| || | |||| |||| ||||| ||| ||||||
Sbjct 63 CAAGTTATTGTCATGCTCTGTCGAAAAATAGAAGGGGGCAAAGAAAAATGTTTTCCCTAC 4
Query 19862 TGG 19864
|||
Sbjct 3 TGG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 78849308569659
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |