Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq172202 172 9e-39 >seq172202 Length=2148 Score = 172 bits (190), Expect = 9e-39 Identities = 331/483 (69%), Gaps = 25/483 (5%) Strand=Plus/Minus Query 19394 GTAAGTGAAGGACGTGACACCTAGAGATATTGTTTCTATATACTAA----ACTATTAT-T 19448 || ||||||||||||| || || || |||| |||| ||| ||| ||| | Sbjct 470 GTGAGTGAAGGACGTGTCAACTTGATTTATT-------TATAATAATTGGACTTGTATAT 418 Query 19449 TAGCCG-TAACAATGGAT-CGGACTATTGATGAGCTCAAATACGCAGACTTCATGGCGCT 19506 | | || | || |||| | || |||| | || || |||||||| |||||||||||||| Sbjct 417 TTGACGATCACCATGGCTACGCCCTATA-AGGATCTGAAATACGCTGACTTCATGGCGCT 359 Query 19507 GATGGAGTGCAGTGACTGCGAAGTACTAATTGGTGAGGAGCATCAGAAGGTTATCAGTGA 19566 ||||| ||||| ||| |||||| | |||| |||||| | | |||||||| || Sbjct 358 AATGGAATGCAGGGACCGCGAAGAAGTAATCAAAACCGAGCATAAACAAGTTATCAGCGA 299 Query 19567 GAAGATACAAGGGACGTATGAAGCCGAAAAAGCTAACAGAAATC-----TAAACCGCTAT 19621 |||||| || || | ||||||| ||| || | || || | || || | Sbjct 298 GAAGATCTCCGGAACCTTTGAAGCC-----AGCGAAAACAACTCGTGCTTGAATCGATTC 244 Query 19622 GCAAATGCGGTTTGCTTCGATCACTCCAGAGTAATTTTACCGACAGAGCGAAATCGGGGG 19681 | || ||||| || |||||||||||||| |||| || | || |||||||| Sbjct 243 GGCCATTGTGTTTGTTTTGATCACTCCAGAGTGGTTTTGCCAAATGAAAAGAATCGGGGA 184 Query 19682 AACTACATTAACGCCAATTATGTAGATGGCTTCGAACGTAGCAAGAAGTTCATCTGCGGA 19741 | || || || || || |||||| |||| || | | | || || ||||| || ||| Sbjct 183 ACATATATCAATGCGAACTATGTAAATGGATTTGCATACAAGAATAAATTCATATGTGGA 124 Query 19742 CAAGCTCCAACCCGACGTACGTGTTACGATTTCTATCGTATGTTGTGGATGGAGCATGTG 19801 | || ||||||| ||| || |||| |||| || || ||| | |||||||||||||| Sbjct 123 GAGGCCCCAACCCAACGCACTAGTTATAATTTTTACCGAATGATATGGATGGAGCATGTA 64 Query 19802 CAAATCGTTGTCATGCTCTGCAAGAAGAAAGAAAATGGCAGGGAAAAGTGTCACCCCTAC 19861 ||| | ||||||||||||| || | |||| |||| ||||| ||| |||||| Sbjct 63 CAAGTTATTGTCATGCTCTGTCGAAAAATAGAAGGGGGCAAAGAAAAATGTTTTCCCTAC 4 Query 19862 TGG 19864 ||| Sbjct 3 TGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78849308569659