Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_006645.1 Length=21388 Score E Sequences producing significant alignments: (Bits) Value seq6339 318 8e-83 seq37566 288 1e-73 seq39172 235 7e-58 seq100149 214 2e-51 seq162491 185 1e-42 seq43747 150 2e-32 seq37569 132 7e-27 seq39171 129 8e-26 seq154477 113 6e-21 seq162492 105 9e-19 seq162493 100 4e-17 >seq6339 Length=786 Score = 318 bits (352), Expect = 8e-83 Identities = 349/477 (73%), Gaps = 14/477 (3%) Strand=Plus/Plus Query 2776 TCCCGGAACTGCAGGACAAATATTTATAATTTTCCCAGAGGGATGAAAATACGGTCAAAA 2835 ||| |||||| ||||| ||||||||||||||||||||||||||||||||||| | ||| Sbjct 104 TCCTGGAACTATAGGACCTATATTTATAATTTTCCCAGAGGGATGAAAATACGGCCGAAA 163 Query 2836 ACGGGTACTTTGACTTGTGTAAGCCACGCCTCCTTTGGACACTttattaatgaaaattat 2895 |||||| || || |||| ||||||||||||| |||||| |||||||||| | |||| ||| Sbjct 164 ACGGGTCCTCTGGCTTGCGTAAGCCACGCCTACTTTGGGCACTTTATTATTAAAAAATAT 223 Query 2896 ttaaaaatattacatataaaatttaagaaatgaaaaaaatCAGAGGCTTACTGGATAGAT 2955 || || || ||| ||||||| ||||| ||||||| ||| |||| || ||||||||||| Sbjct 224 TTTAACATGTTAAATATAAATTTTAACAAATGAATAAATTCAGGGGATTACTGGATAG-- 281 Query 2956 AAATGAAAAATAATTCGCCTGAAAGAAATTTTTATCACAANNNNNNNNNNNNNNNNNNNN 3015 |||||| |||||| ||| ||||| || |||||||||||| Sbjct 282 -AATGAACAATAATACGCGTGAAAAAATTTTTTATCACAATTTTTCTATTAGTTATGCAA 340 Query 3016 NNNNNNNNNNNNNNNNTTTATCTGCTTGAACATGTACATTGCAAGTGTGGAAATTTTTAA 3075 ||| || ||||||||||| |||||| ||||||| ||| |||| Sbjct 341 TTGTTAATTAAAAATTTTTTTCCGCTTGAACATGAACATTGTAAGTGTGATTATTGTTAA 400 Query 3076 CTATAAAATAAATTCGAGGttttt-ttCTCTCTTGGAGCAATTCTTAAAAGGCTCCAGAA 3134 | ||||||| ||| ||||| | ||||||| ||| ||||||| ||||||| |||| Sbjct 401 ----ACTATAAATTTGAGATTTTTCTCCTCTCTTAGAGGAATTCTTGAAAGGCTTTAGAA 456 Query 3135 TAGATCCCCGTTGGANNNNNNNNNNNNNNNNNNNNTCTTAGTTTTTTATTAATAATTTTC 3194 ||||||||||||||| ||| |||||||||| | |||| || Sbjct 457 TAGATCCCCGTTGGA-AAAATTAAAAAAAAAAAAATCT--GTTTTTTATTGACAATTATC 513 Query 3195 GTTGTTGCAAAATTAAAAACTCAAATTAACTATCGAAAAAATTTATTTTTTCTATAT 3251 ||||||||||||||||||| | ||||||| |||| |||||| |||||| |||| Sbjct 514 GTTGTTGCAAAATTAAAAAGTTAAATTAATCATCG---AAATTTTTTTTTTAAATAT 567 >seq37566 Length=943 Score = 288 bits (318), Expect = 1e-73 Identities = 336/468 (72%), Gaps = 12/468 (3%) Strand=Plus/Plus Query 2770 CCCAATTCCCGGAACTGCAGGACAAATATTTATAATTTTCCCAGAGGGATGAAAATACGG 2829 || || ||||||||||| || | ||||||||||||||| ||||||||||||||||||| Sbjct 261 CCGAACTCCCGGAACTGTAGAATCAATATTTATAATTTTTCCAGAGGGATGAAAATACGA 320 Query 2830 TCAAAAACGGGTACTTTGACTTGTGTAAGCCACGCCTCCTTTGGACACTttattaatgaa 2889 | |||||| || || || |||| |||||||| ||| |||||| |||||||||||| || Sbjct 321 CCGAAAACGAGTCCTCTGGCTTGCGTAAGCCAAACCTACTTTGGGCACTTTATTAATAAA 380 Query 2890 aattatttaaaaatattacatataaaatttaagaaatgaaaaaaatCAGAGGCTTACTGG 2949 || ||||| || || ||| ||||||||||||||||||| |||| |||| |||||||||| Sbjct 381 AAATATTTTAACATGTTAAATATAAAATTTAAGAAATGCGAAAATTCAGGGGCTTACTGG 440 Query 2950 ATAGATAAATGAAAAATAATTCGCCTGAAAGAAATTTTTATCACAANNNNNNNNNNNNNN 3009 |||||| |||||| |||||| ||| ||||| || ||||||||| || Sbjct 441 ATAGATGAATGAACAATAATCCGCGTGAAA-AATTTTTTATCAGAATTTTTCAATTAGTT 499 Query 3010 NNNNNNNNNNNNNNNNNNNNNNTTTATCTGCTTGAACATGTACATTGCAAGTGTGGAAAT 3069 ||| || ||||| ||||| |||||||||||||| || Sbjct 500 ATGCAATTGTTAACTAAAATTTTTTTTCCGCTTGGACATGAACATTGCAAGTGTG---AT 556 Query 3070 TTTTAACTATAAAATAAATTCGAGGttttttt-CTCTCTTGGAGCAATTCTTAAAA---- 3124 | || || | ||||||| ||| ||||||| |||||||||||||||||| ||| Sbjct 557 TATT-GGTAAACTATAAATTTGAGATTTTTTTCCTCTCTTGGAGCAATTCTCGAAAAATT 615 Query 3125 --GGCTCCAGAATAGATCCCCGTTGGANNNNNNNNNNNNNNNNNNNNTCTTAGTTTTTTA 3182 | | ||||||||| || |||||| | | ||||||||| Sbjct 616 GTTGTTTTAGAATAGATGCCTGTTGGAAAAATTAAAAAAAATATATTTTTCAGTTTTTTA 675 Query 3183 TTAATAATTTTCGTTGTTGCAAAATTAAAAACTCAAATTAACTATCGA 3230 ||| |||| ||||||||||||||||||||| | ||||||| ||||| Sbjct 676 GTAACAATTATCGTTGTTGCAAAATTAAAAAGTTAAATTAATCATCGA 723 >seq39172 Length=1121 Score = 235 bits (260), Expect = 7e-58 Identities = 166/189 (88%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 2776 TCCCGGAACTGCAGGACAAATATTTATAATTTTCCCAGAGGGATGAAAATACGGTCAAAA 2835 ||||||||||| || || |||||||||||||||||||||||||||||||||||| | ||| Sbjct 190 TCCCGGAACTGTAGAACCAATATTTATAATTTTCCCAGAGGGATGAAAATACGGCCGAAA 131 Query 2836 ACGGGTACTTTGACTTGTGTAAGCCACGCCTCCTTTGGACACTttattaatgaaaattat 2895 ||||| || | |||| ||||||||||||| |||||| |||||||||||| |||| ||| Sbjct 130 TCGGGTCCTCTTGCTTGCGTAAGCCACGCCTACTTTGGGCACTTTATTAATAAAAAATAT 71 Query 2896 ttaaaaatattacatataaaatttaagaaatg--aaaaaaatCAGAGGCTTACTGGATAG 2953 || || || ||| ||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 70 TTTAACATGTTAAATATAAAATTTAAGAAATGAAAAAAAAATCAGGGGCTTACTGGATAG 11 Query 2954 ATAAATGAA 2962 || |||||| Sbjct 10 ATGAATGAA 2 >seq100149 Length=1586 Score = 214 bits (236), Expect = 2e-51 Identities = 149/168 (89%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 2770 CCCAATTCCCGGAACTGCAGGACAAATATTTATAATTTTCCCAGAGGGATGAAAATACGG 2829 ||| | | ||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 210 CCCGACTTCCGGAACTGTAGGACCAATATTTATAATTTTCCCAGAGGGATGAAAATACGG 151 Query 2830 TCAAAAACGGGTACTTTGACTTGTGTAAGCCACGCCTCCTTTGGACACTttattaatgaa 2889 | |||||||| || || |||| ||||||||||||| ||||||||||||||||||| || Sbjct 150 CCGAAAACGGGCCCTCTGGCTTGCGTAAGCCACGCCTACTTTGGACACTTTATTAATAAA 91 Query 2890 aattatttaaaaatattacatataaaatttaagaaatgaaaaaaatCA 2937 || ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct 90 AAATATTTTAAAAT-GTAAATATAAAATTTAAGAAATGAAAAAAATCA 44 >seq162491 Length=244 Score = 185 bits (204), Expect = 1e-42 Identities = 140/164 (85%), Gaps = 1/164 (1%) Strand=Plus/Plus Query 2798 TTTATAATTTTCCCAGAGGGATGAAAATACGGTCAAAAACGGGTACTTTGACTTGTGTAA 2857 |||||||||||||||||||||||||||| ||| | ||||| |||||| || || ||| Sbjct 30 TTTATAATTTTCCCAGAGGGATGAAAATGCGGCCGAAAACAGGTACTCTGGTTTACTTAA 89 Query 2858 GCCACGCCTCCTTTGGACACTttattaatgaaaattatttaaaaatatt-acatataaaa 2916 ||||||||| |||||| || ||||||||| |||| ||||| || || || | |||| ||| Sbjct 90 GCCACGCCTACTTTGGGCAGTTTATTAATAAAAAATATTTTAACATGTTAAAATATGAAA 149 Query 2917 tttaagaaatgaaaaaaatCAGAGGCTTACTGGATAGATAAATG 2960 ||||||||||||||||| |||| |||||||||||||||| |||| Sbjct 150 TTTAAGAAATGAAAAAATTCAGGGGCTTACTGGATAGATGAATG 193 >seq43747 Length=1232 Score = 150 bits (166), Expect = 2e-32 Identities = 214/317 (68%), Gaps = 13/317 (4%) Strand=Plus/Minus Query 2919 taagaaatgaaaaaaatCAGAGGCTTACTGGATAGATAAATGAAAAATAATTCGCCTGAA 2978 ||||||||||||||| |||| |||||||||||||||| |||||| |||||| || |||| Sbjct 1232 TAAGAAATGAAAAAATTCAGGGGCTTACTGGATAGATTAATGAACAATAATCCGAGTGAA 1173 Query 2979 AGAAATTTTTATCACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATCT 3038 |||||||| ||| ||| Sbjct 1172 TTTTTTTTTTATCGCAATTTTCAATTAGTTATGCAATGTTAATTAAAAAAAA----ATCC 1117 Query 3039 GCTTGAACATGTACATTGCAAGTGTGGAAATTTTTAACTATAAAATAAATTCGAGGtttt 3098 ||||||||||| |||||||||||||| ||| |||| | ||||||| ||| |||| Sbjct 1116 GCTTGAACATGAACATTGCAAGTGTGATTATTGTTAA----ACTATAAATTTGAGATTTT 1061 Query 3099 tttC-TCTCTTGGAGCAATTCTTAAAAGGCTCCAGAATAGATCCCCGTTGGANNNNNNNN 3157 |||| |||||||||||||||||| ||||||| |||| |||||||||||||| Sbjct 1060 TTTCCTCTCTTGGAGCAATTCTTGAAAGGCTTTAGAAAAGATCCCCGTTGGAAAAATTAA 1001 Query 3158 NNNNNNNNNNNNTCTTAGTTTTTTATTAATAATTTTCGTTGTTGCAAAATTAAAAACTCA 3217 | ||||||||||| |||| |||||||||||||||||| || | | Sbjct 1000 AAAAAAAAATCACC----TTTTTTATTAACAATTATCGTTGTTGCAAAATTAACAAGTTA 945 Query 3218 AATTAACTATCGAAAAA 3234 |||||| ||||||||| Sbjct 944 AATTAATCATCGAAAAA 928 >seq37569 Length=260 Score = 132 bits (146), Expect = 7e-27 Identities = 167/240 (70%), Gaps = 5/240 (2%) Strand=Plus/Minus Query 2888 aaaattatttaaaaatattacatataaaatttaagaaatgaaaaaaatCAGAGGCTTACT 2947 |||| ||||| || || ||| |||||||||||||||| |||||||| |||| |||||||| Sbjct 237 AAAAATATTTTAACATGTTAAATATAAAATTTAAGAATTGAAAAAATTCAGGGGCTTACT 178 Query 2948 GGATAGATAAATGAAAAATAATTCGCCTGAAAGAAATTTTTATCACAANNNNNNNNNNNN 3007 |||||||| |||||| |||||| ||| | ||| ||||||| |||| Sbjct 177 GGATAGATGAATGAACAATAATCCGCGTAAAAAGTTTTTTTATTACAATTTTTCAATTAG 118 Query 3008 NNNNNNNNNNNNNNNNNNNNNNNNTTTATCTGCTTGAACATGTACATTGCAAGTGTGGAA 3067 ||| || ||||||||||| || ||||||||||| Sbjct 117 TTATGCAATTGTTAATTAAATATTTTTTTCCGCTTGAACATGAACTTTGCAAGTGTGATT 58 Query 3068 ATTTTTAACTATAAAATAAATTCGAGGttttttt-CTCTCTTGGAGCAATTCTTAAAAGG 3126 ||| |||| | ||||||| ||| ||||||| ||||||||||||| ||||| ||||| Sbjct 57 ATTGTTAA----ACTATAAATTTGAGATTTTTTTCCTCTCTTGGAGCAGTTCTTGAAAGG 2 >seq39171 Length=1008 Score = 129 bits (142), Expect = 8e-26 Identities = 154/210 (73%), Gaps = 8/210 (4%) Strand=Plus/Minus Query 3045 ACATGTACATTGCAAGTGTGGAAATTTTTAACTATAAAATAAATTCGAGGtttttttCT- 3103 ||||| |||||||||||||| ||| |||| | ||| ||| ||| || |||||| Sbjct 1008 ACATGAACATTGCAAGTGTGATTATTGTTAA----ACTATATATTTGAGATTGTTTTCTT 953 Query 3104 CTCTTGGAGCAATTCTTAAAAGGCTCCAGAATAGATCCCCGTTGGANNNNNNNNNNNNNN 3163 ||||||||||||||||| ||||||| ||||||||| | ||||||| Sbjct 952 CTCTTGGAGCAATTCTTGAAAGGCT-TAGAATAGATTCGCGTTGGAAGAATTAAAAAAAT 894 Query 3164 NNNNNNTCTT-AGTTTTTTATTAATAATTTTCGTTGTTGCAAAATTAAAAACTCA-AATT 3221 | || ||||||||||||| |||| ||||||||||||||||||||| | | ||| Sbjct 893 ATATATTTTTCAGTTTTTTATTAACAATTATCGTTGTTGCAAAATTAAAAAGTTATTATT 834 Query 3222 AACTATCGAAAAAATTTATTTTTTCTATAT 3251 || |||||||||| | |||||| |||| Sbjct 833 AAACATCGAAAAAAAATGTTTTTTAAATAT 804 >seq154477 Length=3127 Score = 113 bits (124), Expect = 6e-21 Identities = 83/97 (86%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 2770 CCCAATTCCCGGAACTGCAGGACAAATATTTATAATTTTCCCAGAGGGATGAAAATACGG 2829 ||| | ||| || |||| ||||| |||||||| |||||||||| || ||||||||||||| Sbjct 3030 CCCGACTCCTGGCACTGTAGGACCAATATTTACAATTTTCCCACAGAGATGAAAATACGG 3089 Query 2830 TCAAAAACGGGTACTTTGACTTGTGTAAGCCACGCCT 2866 || ||||||||| || || |||| ||||||||||||| Sbjct 3090 TCGAAAACGGGTCCTCTGGCTTGCGTAAGCCACGCCT 3126 >seq162492 Length=301 Score = 105 bits (116), Expect = 9e-19 Identities = 145/215 (67%), Gaps = 11/215 (5%) Strand=Plus/Minus Query 2935 tCAGAGGCTTACTGGATAGATAAATGAAAAATAATTCGCCTGAAAGAAATTTTTATCACA 2994 |||| |||||||||||||||| |||||| |||||| | | ||||| |||| ||||||||| Sbjct 301 TCAGGGGCTTACTGGATAGATGAATGAACAATAATCCCCGTGAAAAAAATGTTTATCACA 242 Query 2995 ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATCTGCTTGAACATGTACAT 3054 | ||| || ||||||||||| |||| Sbjct 241 ATTTTTCAATTAGTTATGCGATTGTTAATTAAAAATTTTTTTCCGCTTGAACATGAACAT 182 Query 3055 TGCAAGTGTGGAAATTTTTAACTATAAAATAAATTCGAGGtttttttCTCTCTTGGAGCA 3114 |||||||||| ||| ||| || | || |||||| ||||||||||| | Sbjct 181 TGCAAGTGTGATTATTGTTA----------AACTGAGA-CTTTTTTCCTCTCTTGGAGAA 133 Query 3115 ATTCTTAAAAGGCTCCAGAATAGATCCCCGTTGGA 3149 |||||| ||||||| |||||||||||||||||||| Sbjct 132 ATTCTTGAAAGGCTTCAGAATAGATCCCCGTTGGA 98 >seq162493 Length=370 Score = 100 bits (110), Expect = 4e-17 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2770 CCCAATTCCCGGAACTGCAGGACAAATATTTATAATTTTCCCAGAGGGATGAAAATACGG 2829 ||| | ||||||||||| ||||| ||||||||||||||| |||||||||||||||||||| Sbjct 76 CCCGACTCCCGGAACTGTAGGACCAATATTTATAATTTTACCAGAGGGATGAAAATACGG 17 Query 2830 TCAAAAACGGGTACT 2844 | ||||||||| || Sbjct 16 CCGAAAACGGGTCCT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 68128023441819