Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_006656.1 Length=12682 Score E Sequences producing significant alignments: (Bits) Value seq172202 156 3e-34 >seq172202 Length=2148 Score = 156 bits (172), Expect = 3e-34 Identities = 265/387 (68%), Gaps = 0/387 (0%) Strand=Plus/Plus Query 664 CCAGTACGGGTAGCAtttttcttttccattttctttcttttGGGTCAGCATCACGATTAT 723 |||||| || | ||||||||||| || |||| | ||| | ||||| || || | Sbjct 1 CCAGTAGGGAAAACATTTTTCTTTGCCCCCTTCTATTTTTCGACAGAGCATGACAATAAC 60 Query 724 CTGTACTTGCTCCATCCACAGCATTCTGTAAAAATCGTAGCACGTGTTACGAGTCGGGGC 783 ||||| ||||||||||| | ||||| |||||||| || | ||| | || ||||| Sbjct 61 TTGTACATGCTCCATCCATATCATTCGGTAAAAATTATAACTAGTGCGTTGGGTTGGGGC 120 Query 784 TTCTCCGCAAATGAACTTCTTTGTGTGCTCAAATCCGTCAACATAGTTGGCGTTTATGTA 843 ||||| || ||||| || || ||| ||||||| | |||||||| || || || || Sbjct 121 CTCTCCACATATGAATTTATTCTTGTATGCAAATCCATTTACATAGTTCGCATTGATATA 180 Query 844 GCTCCCCCTGTTCCGCTCCTTCGGCAGAATCACTCTCGAGTGATCAAAACACACGGCGTG 903 | |||| ||| || || |||| || |||||| |||||||||||||| || || Sbjct 181 TGTTCCCCGATTCTTTTCATTTGGCAAAACCACTCTGGAGTGATCAAAACAAACACAATG 240 Query 904 GTCGAACCTGTTCAAACTTTTGTNNNNNNNNNCTGCTGTAAAGGTGCCTTCTACTTTCTC 963 | |||| | ||||| | || ||| |||||| || | ||||| Sbjct 241 GCCGAATCGATTCAAGCACGAGTTGTTTTCGCTGGCTTCAAAGGTTCCGGAGATCTTCTC 300 Query 964 ACTGATAACTCTTTGATGTTCTGCATCGATAACTTCCTTGCAGTCGCTGCGGTACATAAG 1023 ||||||||| || ||| || | | ||| ||||| | || ||| |||| | ||| || Sbjct 301 GCTGATAACTTGTTTATGCTCGGTTTTGATTACTTCTTCGCGGTCCCTGCATTCCATTAG 360 Query 1024 CGCCAGAAACTCTGCGTATTTCAGCTC 1050 ||||| || || ||||||||||| || Sbjct 361 CGCCATGAAGTCAGCGTATTTCAGATC 387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40354723086872