Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_006658.1
Length=30655
Score E
Sequences producing significant alignments: (Bits) Value
seq188347 107 4e-19
seq92338 95.1 2e-15
seq73061 80.6 5e-11
>seq188347
Length=904
Score = 107 bits (118), Expect = 4e-19
Identities = 324/494 (66%), Gaps = 25/494 (5%)
Strand=Plus/Minus
Query 3909 AGAGTACTCGGACTTATACTTAAAGACTGATGTCCTTCTCTTGACTGATGTCTTTGAAAA 3968
||| ||||| | ||||| | || || ||||| | || || || || | ||||||||
Sbjct 489 AGATTACTCCAATTTATATCTCAAAACAGATGTTTTACTTTTAACAGACATTTTTGAAAA 430
Query 3969 CTTTAGACGTAGTTGTTTCAAGACATACAATTTAGACGCACTACACTTTTATACAGCACC 4028
||| | | |||| | | ||||| |||||| | || | |||||| ||||
Sbjct 429 CTTCCGTGATGTTTGTATAAGTACATATGGTTTAGATCCTGCTCATTATTATACTTCACC 370
Query 4029 AGGTCTTTCGAACGCTGCAATGTTAAAGCATACTGAAGTAGAACTTGAACTGTTAACTGA 4088
|| ||| | ||| |||||||| ||||| || ||||| | || || || |||||
Sbjct 369 CGGGCTTAGTTGGGATGCTATGTTAAAACATACACAAATAGAATTAGAGCTTTTGACTGA 310
Query 4089 TCCTGAGATGCTTCTTTTCATTGAAAAG---GGTGTTCGCGGTGGGGTATCGATGTGTGC 4145
| ||||||| | |||||| |||| ||| | | ||||| | || ||||
Sbjct 309 TATTGAGATGATAGCTTTCAT---AAAGTCTGGTATAAGAGGTGGAATTTCTCAGTGTAG 253
Query 4146 TAATAGACATGCTGAAGCTAACAACCGGTATATGGGCAAAGATTTTGATTCAAACAACCC 4205
||| ||| |||| ||||||| || ||| | | | || ||| || || | ||
Sbjct 252 TAACAGATATGCCAAAGCTAATAATAAATATTTAG---ACGACTTTCATGATAATCAACC 196
Query 4206 CGAAACATACCTGATGTACTATGATGTAAATAATTTGTATGGCGCAGCGATGAGT--ATG 4263
| | |||| | | || | |||| ||| ||| ||||||| |||||| | ||
Sbjct 195 TGTATCATATTTAACTTATTTAGATGCAAACAATCTGTATGGTTGGGCGATGTCTCAATA 136
Query 4264 TCTTTACCAAAGGGTAAATTTGAATGGGTTGA---AAATGTAGATGATGTAGATCAGTTT 4320
||| ||| | ||| ||||||||| |||| ||||||| || ||| | |
Sbjct 135 CCTT--CCATATGGTGGTTTTGAATGGATTGACACAAATGTAAATTATG-------ATAT 85
Query 4321 TTCAATGATGATGAGAGTGTAGGCTACATCCTTGAAGTAGATCTACACTATCCTGAGAAT 4380
||| | | || ||| |||||||||||| | ||||| ||| || |||||||||| |||
Sbjct 84 TTC-ACCAACATCAGA-TGTAGGCTACATATTAGAAGTGGATTTAGACTATCCTGATAAT 27
Query 4381 TTACATGATCTACA 4394
|||||||| || ||
Sbjct 26 TTACATGACCTTCA 13
>seq92338
Length=1227
Score = 95.1 bits (104), Expect = 2e-15
Identities = 134/189 (71%), Gaps = 12/189 (6%)
Strand=Plus/Plus
Query 3046 GTACCGTTTGTTGTTTACGCGGATCTAGAATGCATACTCGAACCCTCGGGAGACGATGAA 3105
|| || ||||||||||| || ||||| |||||||| |||||||| | |||||||
Sbjct 571 GTTCCATTTGTTGTTTATGCTGATCTTGAATGCATTCTCGAACC------ATACGATGAT 624
Query 3106 AAACCAGCTCATAAACATGTTCCACACAGTATTGCTTATTATGTATATTGCAGCTATGAT 3165
|| || |||||| ||||| ||||| |||||| ||||| |||| | ||||
Sbjct 625 AA------GCAGAAACATATTCCATACAGTGTTGCTTTCTATGTTCATTGTTCATTTGAT 678
Query 3166 AATACACTCTCTAAATTTGAATTAAACCGTTCTCCTGATTGCATCAATTGGTTCGTTAAA 3225
| | | ||||||||| | || || ||| | ||||||||| |||||||| || |
Sbjct 679 GAATCTCAATCTAAATTTTATTTGAAACGTGGTGATGATTGCATTAATTGGTTTGTCTTA 738
Query 3226 CAATTAGAA 3234
||||| ||
Sbjct 739 GAATTAAAA 747
>seq73061
Length=1487
Score = 80.6 bits (88), Expect = 5e-11
Identities = 177/263 (67%), Gaps = 2/263 (1%)
Strand=Plus/Plus
Query 16483 GTCCGCTTCCACGTTGTCTTTAGATGCGATGTAGGATGCATAAACCCAGAGATCTCGACG 16542
||| ||||| | ||| ||||| | ||||| || ||| ||| ||| | || || |
Sbjct 3 GTCTGCTTCAAAGTTATCTTTTGTATTAATGTATGAAGCAAAAAGCCATATATTTCTTTG 62
Query 16543 TTCACACCAGTTCCATAGATCTCTCGCTAAGTC-GTGTAGACCTTCTGATCTCGTACCAC 16601
||||||||| | ||| | |||||| | ||| | || ||| | || |||| |
Sbjct 63 TTCACACCATTGCCAAATATCTCTTG-TAATACTGTTGAGATGTGGAAATTAAATACCTC 121
Query 16602 CTAGTTTATTGATGTAAGCTAGCGTGGTTGTGTTATCTACTCTTAGCAATATTTCCGCGG 16661
| | |||||| || || |||| | ||||||||||| | ||||| || || ||
Sbjct 122 CCATTTTATTTATATATGCTATTGCTGTTGTGTTATCAATTCTTAATAAGATCTCACAAC 181
Query 16662 AGTGTAAGTTTTTTGCAAATAATTTTAGAGCTATAAAAGCTGCTTTTAATTCTAAATAAT 16721
| | | ||| ||||| ||| ||| | |||||||| |||||||| |||||||| |
Sbjct 182 TATTCATGGATTTAGCAAAGCATTGTAGGCCCATAAAAGCAGCTTTTAACTCTAAATAGT 241
Query 16722 TGATATGTAAAGATTTTTCAGTT 16744
| ||||| | ||||||| ||
Sbjct 242 TAATATGATATTGTTTTTCAATT 264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97686955540902
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |