Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq188347 107 4e-19 seq92338 95.1 2e-15 seq73061 80.6 5e-11 >seq188347 Length=904 Score = 107 bits (118), Expect = 4e-19 Identities = 324/494 (66%), Gaps = 25/494 (5%) Strand=Plus/Minus Query 3909 AGAGTACTCGGACTTATACTTAAAGACTGATGTCCTTCTCTTGACTGATGTCTTTGAAAA 3968 ||| ||||| | ||||| | || || ||||| | || || || || | |||||||| Sbjct 489 AGATTACTCCAATTTATATCTCAAAACAGATGTTTTACTTTTAACAGACATTTTTGAAAA 430 Query 3969 CTTTAGACGTAGTTGTTTCAAGACATACAATTTAGACGCACTACACTTTTATACAGCACC 4028 ||| | | |||| | | ||||| |||||| | || | |||||| |||| Sbjct 429 CTTCCGTGATGTTTGTATAAGTACATATGGTTTAGATCCTGCTCATTATTATACTTCACC 370 Query 4029 AGGTCTTTCGAACGCTGCAATGTTAAAGCATACTGAAGTAGAACTTGAACTGTTAACTGA 4088 || ||| | ||| |||||||| ||||| || ||||| | || || || ||||| Sbjct 369 CGGGCTTAGTTGGGATGCTATGTTAAAACATACACAAATAGAATTAGAGCTTTTGACTGA 310 Query 4089 TCCTGAGATGCTTCTTTTCATTGAAAAG---GGTGTTCGCGGTGGGGTATCGATGTGTGC 4145 | ||||||| | |||||| |||| ||| | | ||||| | || |||| Sbjct 309 TATTGAGATGATAGCTTTCAT---AAAGTCTGGTATAAGAGGTGGAATTTCTCAGTGTAG 253 Query 4146 TAATAGACATGCTGAAGCTAACAACCGGTATATGGGCAAAGATTTTGATTCAAACAACCC 4205 ||| ||| |||| ||||||| || ||| | | | || ||| || || | || Sbjct 252 TAACAGATATGCCAAAGCTAATAATAAATATTTAG---ACGACTTTCATGATAATCAACC 196 Query 4206 CGAAACATACCTGATGTACTATGATGTAAATAATTTGTATGGCGCAGCGATGAGT--ATG 4263 | | |||| | | || | |||| ||| ||| ||||||| |||||| | || Sbjct 195 TGTATCATATTTAACTTATTTAGATGCAAACAATCTGTATGGTTGGGCGATGTCTCAATA 136 Query 4264 TCTTTACCAAAGGGTAAATTTGAATGGGTTGA---AAATGTAGATGATGTAGATCAGTTT 4320 ||| ||| | ||| ||||||||| |||| ||||||| || ||| | | Sbjct 135 CCTT--CCATATGGTGGTTTTGAATGGATTGACACAAATGTAAATTATG-------ATAT 85 Query 4321 TTCAATGATGATGAGAGTGTAGGCTACATCCTTGAAGTAGATCTACACTATCCTGAGAAT 4380 ||| | | || ||| |||||||||||| | ||||| ||| || |||||||||| ||| Sbjct 84 TTC-ACCAACATCAGA-TGTAGGCTACATATTAGAAGTGGATTTAGACTATCCTGATAAT 27 Query 4381 TTACATGATCTACA 4394 |||||||| || || Sbjct 26 TTACATGACCTTCA 13 >seq92338 Length=1227 Score = 95.1 bits (104), Expect = 2e-15 Identities = 134/189 (71%), Gaps = 12/189 (6%) Strand=Plus/Plus Query 3046 GTACCGTTTGTTGTTTACGCGGATCTAGAATGCATACTCGAACCCTCGGGAGACGATGAA 3105 || || ||||||||||| || ||||| |||||||| |||||||| | ||||||| Sbjct 571 GTTCCATTTGTTGTTTATGCTGATCTTGAATGCATTCTCGAACC------ATACGATGAT 624 Query 3106 AAACCAGCTCATAAACATGTTCCACACAGTATTGCTTATTATGTATATTGCAGCTATGAT 3165 || || |||||| ||||| ||||| |||||| ||||| |||| | |||| Sbjct 625 AA------GCAGAAACATATTCCATACAGTGTTGCTTTCTATGTTCATTGTTCATTTGAT 678 Query 3166 AATACACTCTCTAAATTTGAATTAAACCGTTCTCCTGATTGCATCAATTGGTTCGTTAAA 3225 | | | ||||||||| | || || ||| | ||||||||| |||||||| || | Sbjct 679 GAATCTCAATCTAAATTTTATTTGAAACGTGGTGATGATTGCATTAATTGGTTTGTCTTA 738 Query 3226 CAATTAGAA 3234 ||||| || Sbjct 739 GAATTAAAA 747 >seq73061 Length=1487 Score = 80.6 bits (88), Expect = 5e-11 Identities = 177/263 (67%), Gaps = 2/263 (1%) Strand=Plus/Plus Query 16483 GTCCGCTTCCACGTTGTCTTTAGATGCGATGTAGGATGCATAAACCCAGAGATCTCGACG 16542 ||| ||||| | ||| ||||| | ||||| || ||| ||| ||| | || || | Sbjct 3 GTCTGCTTCAAAGTTATCTTTTGTATTAATGTATGAAGCAAAAAGCCATATATTTCTTTG 62 Query 16543 TTCACACCAGTTCCATAGATCTCTCGCTAAGTC-GTGTAGACCTTCTGATCTCGTACCAC 16601 ||||||||| | ||| | |||||| | ||| | || ||| | || |||| | Sbjct 63 TTCACACCATTGCCAAATATCTCTTG-TAATACTGTTGAGATGTGGAAATTAAATACCTC 121 Query 16602 CTAGTTTATTGATGTAAGCTAGCGTGGTTGTGTTATCTACTCTTAGCAATATTTCCGCGG 16661 | | |||||| || || |||| | ||||||||||| | ||||| || || || Sbjct 122 CCATTTTATTTATATATGCTATTGCTGTTGTGTTATCAATTCTTAATAAGATCTCACAAC 181 Query 16662 AGTGTAAGTTTTTTGCAAATAATTTTAGAGCTATAAAAGCTGCTTTTAATTCTAAATAAT 16721 | | | ||| ||||| ||| ||| | |||||||| |||||||| |||||||| | Sbjct 182 TATTCATGGATTTAGCAAAGCATTGTAGGCCCATAAAAGCAGCTTTTAACTCTAAATAGT 241 Query 16722 TGATATGTAAAGATTTTTCAGTT 16744 | ||||| | ||||||| || Sbjct 242 TAATATGATATTGTTTTTCAATT 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97686955540902