Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 226 2e-54
seq67196 104 2e-17
seq15021 100 2e-16
seq193007 82.4 7e-11
>seq131719
Length=2163
Score = 226 bits (250), Expect = 2e-54
Identities = 351/499 (70%), Gaps = 2/499 (0%)
Strand=Plus/Plus
Query 55830 GCATATTTTGTCGAGTGGGGTGTTTATCATAGAAACTTTCCTGTCACTCGAGTTCCCACT 55889
|| || || || || ||||| || |||| || || || || || || || || |
Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619
Query 55890 CCTAATCTGTCACACATTCTCTACGGATTCATACCGATATGCGGCGGCGACGGCATTAAC 55949
|| |||||| | ||| | | ||||| ||||| ||||| ||||| ||||||||||| |||
Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679
Query 55950 GACAGTCTCAAGACGATAACCGGTAGTTTTGAAGCGCTTCAGCGATCGTGTTCGGGTCGA 56009
|||||||| ||| ||| || ||||| | || || ||||| || || || ||
Sbjct 1680 GACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGC 1739
Query 56010 GACGACTTCAAAGTGTCGATTCATGACCCGTGGGCTGCGGTCCAAAAGCCCCAAAAACAA 56069
|| |||||||||||||| ||||||||||| ||||| || | || || || |||||
Sbjct 1740 GAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGC 1799
Query 56070 GTGACCGCATGGAACGAACCATACAAAGGCAACTTTGGACAATTGATGGCAGCTAAACTG 56129
| | ||||||||||||| |||||||| ||||| || ||| ||||| |||| |
Sbjct 1800 CTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAG 1859
Query 56130 GCGAATCCCCATGTTAAAGTGCTGCCTTCGATCGGTGGCTGGACTTTATCCGATCCGTTC 56189
|||| || | | || | ||||||| |||| ||||||||||| | ||||| |||
Sbjct 1860 GCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATTC 1919
Query 56190 TTTTACTTTCAC-GATGCGGTCAAACGCAAAATTTTTGTCGATTCTGTCGTCGAGTTTTT 56248
|||| | ||||| || | || || | ||| || | ||| || || || |
Sbjct 1920 TTTTTC-TTCACTGACAAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAAGACTTCCT 1978
Query 56249 ACAGACCTGGAAATTTTTCGATGGTGTCGACATCGACTGGGAGTTTCCCGGCGGAAAGGG 56308
|||||||||||||| || || || ||||| ||||| |||||||| || || || || ||
Sbjct 1979 CCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAAAGG 2038
Query 56309 GGCCAATTCCAACGTCGGC 56327
|| || |||| |||||
Sbjct 2039 CGCTAACCCCAATCTCGGC 2057
>seq67196
Length=1848
Score = 104 bits (114), Expect = 2e-17
Identities = 146/203 (72%), Gaps = 4/203 (2%)
Strand=Plus/Minus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
|| |||||| | || || ||||| || ||||||||| |||| ||| | |||||||| |
Sbjct 926 CATAATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACC 867
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
|| || |||||| | || ||| |||||| ||||||||||| || || || ||
Sbjct 866 TTCAGATACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCCCCAGA 807
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA--ACGTCAGCGAT 24164
||| ||| | ||||||| | || ||||| | ||||| | | | | |||| |||
Sbjct 806 TCAGCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCA--GAT 749
Query 24165 TATAACATTCAAAAAGAATCTAC 24187
|| || |||||||||||||| ||
Sbjct 748 TACAATATTCAAAAAGAATCCAC 726
Score = 98.7 bits (108), Expect = 9e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| ||||| || ||||| ||| | ||||| | || || ||| ||| |
Sbjct 238 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATTACTCTAGAGGTAGAG-CCATC 180
Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
||||| || ||| | || ||| |||||| || || || || || || || || ||
Sbjct 179 AGACACTATTGAGAATGTAAAAGCCAAGATTCAAGATAAGGAGGGGATCCCCCCAGACCA 120
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||||||||||||| || ||||| ||||| ||||||| | | | | || || ||
Sbjct 119 GCAGAGACTGATTTTCGCTGGCAAACAACTTGAAGATGGGCGCACCCTATCTGACTACAA 60
Query 24170 CATTCAAAAAGAATCTAC 24187
||||| |||||||||||
Sbjct 59 TATTCAGAAAGAATCTAC 42
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| ||||| || ||||| ||| | || || | ||||| ||| ||| |
Sbjct 466 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATCACTCTAGAAGTTGAG-CCATC 408
Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|||||||| || | |||||| |||||| || || ||||| || || || |||||
Sbjct 407 TGACACCATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGTATTCCGCCAGATCA 348
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||| | ||||| | | || || || || ||||||| | | | | | || |||||
Sbjct 347 ACAACGTCTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACCCTATCTGACTATAA 288
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202
|| ||||||||||| || ||||| | || ||
Sbjct 287 TATCCAAAAAGAATCCACCCTTCATCTGGTTTT 255
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| ||||| | ||||| ||| | ||||| | ||||| ||| ||| |
Sbjct 694 ATGCAGATCTTTGTTAAAACCCTTACTGGCAAAACTATTACACTTGAAGTTGAG-CCATC 636
Query 24051 G-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
| |||| || || | || || || ||| || || ||||| || || || || ||
Sbjct 635 GGACACAATTGAAAACGTTAAGGCTAAAATTCAAGATAAGGAAGGGATCCCCCCAGACCA 576
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
|||||| |||||| | ||||| ||||| ||||||| | | | | || || ||
Sbjct 575 GCAGAGAATGATTTTTGCTGGCAAACAACTTGAAGATGGGCGTACCCTATCTGACTACAA 516
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199
||||| ||||||||||| | ||| ||||
Sbjct 515 TATTCAGAAAGAATCTACTTTGCATCTAGT 486
>seq15021
Length=1916
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
|||||| | || |||||||| |||| || || | || ||| | || || |||||
Sbjct 727 AATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGGCTTC 786
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|||||| || || | || ||| |||||| || ||||| || || ||||| |||||
Sbjct 787 CGACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCTCCTGATCA 846
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||| || |||| | | || || ||| | ||||| | | | | | ||||| ||
Sbjct 847 ACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCTGATTACAA 906
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
||||| ||||||||||| |||| || |||||||| | ||||||||
Sbjct 907 TATTCAGAAAGAATCTACTCTTCACTTGGTGTTAAGGCTCAGAGGAGG 954
>seq193007
Length=659
Score = 82.4 bits (90), Expect = 7e-11
Identities = 148/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| || ||| | ||||| ||| | || || | ||||| || ||| |
Sbjct 630 ATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAA-CCATC 572
Query 24051 G-ACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
| |||| || ||| | |||||| || ||| ||||||||||| || || || || ||
Sbjct 571 GGACACTATTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCA 512
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAACGTCAGCGATTATA 24168
|||| | || || | | || || ||||| |||||| ||| | || | ||| || |
Sbjct 511 ACAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACAC-TATCCGACTACA 453
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGT 24199
| || || |||||||||||| | || || ||
Sbjct 452 ATATCCAGAAAGAATCTACATTGCACTTGGT 422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428641428174765
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |