Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq131719 280 1e-70 seq174000 111 1e-19 seq67196 84.2 2e-11 >seq131719 Length=2163 Score = 280 bits (310), Expect = 1e-70 Identities = 357/489 (73%), Gaps = 2/489 (0%) Strand=Plus/Plus Query 32177 GCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTGCCGTTG 32236 || || || ||||||||||| ||||| | | || ||||| | ||| |||||| | Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619 Query 32237 CCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAAC 32296 |||||| || | || |||||||||| || ||||| || ||||| |||||||| | ||| Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679 Query 32297 GATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCGC 32356 || || || ||| ||||||||| |||| || || ||||| |||| |||||| Sbjct 1680 GACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGC 1739 Query 32357 GCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGGC 32416 | |||||| || || ||||||| ||||| |||||||| | || ||||| || |||||| Sbjct 1740 GAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGC 1799 Query 32417 GTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTTG 32476 | ||| | ||||||||||| |||||||| ||||| |||||| ||||| | || | Sbjct 1800 CTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAG 1859 Query 32477 GCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCCCTTT 32536 || | || || | || ||||| || || | ||||| ||||| ||| | ||||| || Sbjct 1860 GCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATTC 1919 Query 32537 TATTTTATGCAC-GACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAGTTTTT 32595 | |||| | ||| ||| | ||| || || || || | |||||| ||||| || | Sbjct 1920 T-TTTTCTTCACTGACAAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAAGACTTCCT 1978 Query 32596 ACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCAAAGG 32655 ||| ||||||||||||||||| || || || |||||||||||||| || || ||||| Sbjct 1979 CCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAAAGG 2038 Query 32656 TGCCAACCC 32664 || ||||| Sbjct 2039 CGCTAACCC 2047 >seq174000 Length=6590 Score = 111 bits (122), Expect = 1e-19 Identities = 179/256 (70%), Gaps = 6/256 (2%) Strand=Plus/Minus Query 109228 CATCCCAAATACGCAACGGAAGTTGCACGTTTGCGCACTTTTGCAGAATGGCCTCGTGGT 109287 || |||||||||||| |||||| || || | ||| || ||| |||||| | | Sbjct 3165 CACCCCAAATACGCATCGGAAGCCGCCCGCATCAGCAGCTTCAAAGATTGGCCTAGATCT 3106 Query 109288 TTGAAACAGCAACCCGATAAACTAGCCGAGGCCGGGTTTTATTACACGGGCCAGGGCGAT 109347 | ||| |||| || | ||||||||||||| || | ||| || || || || || Sbjct 3105 ATCCGTCAGAAACCGGAAGATTTAGCCGAGGCCGGCTTCTTTTATACAGGACAAGGTGAC 3046 Query 109348 AAAACCAAATGTTTTTATTGTGACGGCGGTTTGAAAGACTGGGAGGCGGACGATGA---G 109404 || |||||||| |||||||||||||||||| | ||||| ||||| ||||||| Sbjct 3045 AAGACCAAATGCTTTTATTGTGACGGCGGTCTTAAAGATTGGGA---AAACGATGACATA 2989 Query 109405 CCGTGGAAACTGCACGCGCGTTGGTTTGACCGTTGCCCTTACGTGTTGCTTGTTAAGGGT 109464 |||||| || ||||| || ||||| || || | || | |||||| |||||| Sbjct 2988 CCGTGGGAAGAACACGCACGATGGTTCAGTCGATGTGCCTATCTCCAGCTTGTAAAGGGT 2929 Query 109465 CGAGATTATGTGCAAA 109480 |||||| || |||| Sbjct 2928 AAAGATTACGTCCAAA 2913 >seq67196 Length=1848 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 115277 AGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACG 115336 ||||| | |||||| ||||| || ||||| | || |||||||| || ||| | ||| Sbjct 931 AGATTCATAATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTC 872 Query 115337 GAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCC 115396 || | || ||| | | | || ||| || ||| || |||||||| ||||| Sbjct 871 GAACCTTCAGATACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCC 812 Query 115397 GTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCC 115456 |||||||| | || |||| ||| || || || || ||||| | | || || | Sbjct 811 CCAGATCAGCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCA 752 Query 115457 GATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| || ||||||||||| || ||| ||||| | || | || | || ||||| Sbjct 751 GATTACAATATTCAAAAAGAATCCACTTTACATCTTGTTCTACGACTTCGCGGAGG 696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424063255055560