Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 280 1e-70
seq174000 111 1e-19
seq67196 84.2 2e-11
>seq131719
Length=2163
Score = 280 bits (310), Expect = 1e-70
Identities = 357/489 (73%), Gaps = 2/489 (0%)
Strand=Plus/Plus
Query 32177 GCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTGCCGTTG 32236
|| || || ||||||||||| ||||| | | || ||||| | ||| |||||| |
Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619
Query 32237 CCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAAC 32296
|||||| || | || |||||||||| || ||||| || ||||| |||||||| | |||
Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679
Query 32297 GATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCGC 32356
|| || || ||| ||||||||| |||| || || ||||| |||| ||||||
Sbjct 1680 GACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGC 1739
Query 32357 GCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGGC 32416
| |||||| || || ||||||| ||||| |||||||| | || ||||| || ||||||
Sbjct 1740 GAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGC 1799
Query 32417 GTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTTG 32476
| ||| | ||||||||||| |||||||| ||||| |||||| ||||| | || |
Sbjct 1800 CTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAG 1859
Query 32477 GCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCCCTTT 32536
|| | || || | || ||||| || || | ||||| ||||| ||| | ||||| ||
Sbjct 1860 GCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATTC 1919
Query 32537 TATTTTATGCAC-GACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAGTTTTT 32595
| |||| | ||| ||| | ||| || || || || | |||||| ||||| || |
Sbjct 1920 T-TTTTCTTCACTGACAAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAAGACTTCCT 1978
Query 32596 ACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCAAAGG 32655
||| ||||||||||||||||| || || || |||||||||||||| || || |||||
Sbjct 1979 CCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAAAGG 2038
Query 32656 TGCCAACCC 32664
|| |||||
Sbjct 2039 CGCTAACCC 2047
>seq174000
Length=6590
Score = 111 bits (122), Expect = 1e-19
Identities = 179/256 (70%), Gaps = 6/256 (2%)
Strand=Plus/Minus
Query 109228 CATCCCAAATACGCAACGGAAGTTGCACGTTTGCGCACTTTTGCAGAATGGCCTCGTGGT 109287
|| |||||||||||| |||||| || || | ||| || ||| |||||| | |
Sbjct 3165 CACCCCAAATACGCATCGGAAGCCGCCCGCATCAGCAGCTTCAAAGATTGGCCTAGATCT 3106
Query 109288 TTGAAACAGCAACCCGATAAACTAGCCGAGGCCGGGTTTTATTACACGGGCCAGGGCGAT 109347
| ||| |||| || | ||||||||||||| || | ||| || || || || ||
Sbjct 3105 ATCCGTCAGAAACCGGAAGATTTAGCCGAGGCCGGCTTCTTTTATACAGGACAAGGTGAC 3046
Query 109348 AAAACCAAATGTTTTTATTGTGACGGCGGTTTGAAAGACTGGGAGGCGGACGATGA---G 109404
|| |||||||| |||||||||||||||||| | ||||| ||||| |||||||
Sbjct 3045 AAGACCAAATGCTTTTATTGTGACGGCGGTCTTAAAGATTGGGA---AAACGATGACATA 2989
Query 109405 CCGTGGAAACTGCACGCGCGTTGGTTTGACCGTTGCCCTTACGTGTTGCTTGTTAAGGGT 109464
|||||| || ||||| || ||||| || || | || | |||||| ||||||
Sbjct 2988 CCGTGGGAAGAACACGCACGATGGTTCAGTCGATGTGCCTATCTCCAGCTTGTAAAGGGT 2929
Query 109465 CGAGATTATGTGCAAA 109480
|||||| || ||||
Sbjct 2928 AAAGATTACGTCCAAA 2913
>seq67196
Length=1848
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/236 (68%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 115277 AGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACG 115336
||||| | |||||| ||||| || ||||| | || |||||||| || ||| | |||
Sbjct 931 AGATTCATAATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTC 872
Query 115337 GAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCC 115396
|| | || ||| | | | || ||| || ||| || |||||||| |||||
Sbjct 871 GAACCTTCAGATACTATCGAGAACGTTAAAGCTAAGATTCAGGACAAAGAAGGTATCCCC 812
Query 115397 GTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCC 115456
|||||||| | || |||| ||| || || || || ||||| | | || || |
Sbjct 811 CCAGATCAGCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCA 752
Query 115457 GATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| || ||||||||||| || ||| ||||| | || | || | || |||||
Sbjct 751 GATTACAATATTCAAAAAGAATCCACTTTACATCTTGTTCTACGACTTCGCGGAGG 696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424063255055560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |