Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq131719 215 5e-51 seq168888 150 2e-31 seq67196 107 2e-18 >seq131719 Length=2163 Score = 215 bits (238), Expect = 5e-51 Identities = 348/495 (70%), Gaps = 8/495 (2%) Strand=Plus/Plus Query 23643 GCCTACTTTGTCGAGTGGGGCGTATATCCCAGACAATTTCCCGTAGACAAAGTGCCCGTG 23702 || ||||| || || ||||| || ||||| || | || ||||| ||| ||||| | Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619 Query 23703 CCTAATTTGTCACATTTGCTCTACGGCTTCGTACCTATATGCGGCGGCGAGGGAATTAAC 23762 || ||| || | || ||| | ||||| ||| | || || ||||| ||||| || || ||| Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679 Query 23763 GACGCTCTCAAAACCGTGCCGGGCAGTTTCGAGGCGCTGCAGCGTTCGTGCGCGGGCCGC 23822 ||| ||| || | |||||||||| |||| || |||||||| ||| |||||| Sbjct 1680 GACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGC 1739 Query 23823 GCCGACTTCAAGGTATCCATCCACGATCCGTGGGCAGCTCTTCAGAAGCCGCAGAAGGGA 23882 | |||||||| || ||||| || || || ||||| ||||||||||| || || ||||| Sbjct 1740 GAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGC 1799 Query 23883 GTGTCGGCGTGGAACGAGCCGTATCGTGGAAACTTTGGTCAGTTGATGGCAACGAAACTG 23942 | || | |||||||| || || |||||||| || || ||||| ||||| | Sbjct 1800 CTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAG 1859 Query 23943 GCGTATCCGCACTTGAAAGTGCTACCTTCGATCGGTGGCTGGACGCTGTCTGATCCGT-- 24000 ||| || || | || | | ||||| |||| |||||||| || ||||||| | Sbjct 1860 GCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATTC 1919 Query 24001 TTTATC-ACATGCACGAG-CCCAGCGTACGCCGTGTGTTTATCGACTCTGTCGAAGAGTT 24058 ||| || || || || | ||||| |||| || | | || || |||| || Sbjct 1920 TTTTTCTTCACTGACAAGACAAAGCGT-GACCGT---TTCGTTGCTTCCGTAAAAGACTT 1975 Query 24059 TTTGTTAACGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTCCCCGGCGGCAA 24118 | || ||||||||||||||||||||||| || |||||||||||||| || || || Sbjct 1976 CCTCCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAA 2035 Query 24119 AGGGGCAAATCCCAA 24133 ||| || || ||||| Sbjct 2036 AGGCGCTAACCCCAA 2050 >seq168888 Length=4095 Score = 150 bits (166), Expect = 2e-31 Identities = 471/718 (66%), Gaps = 11/718 (2%) Strand=Plus/Minus Query 145055 TGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAG 145114 ||||| || || || |||||||| | ||| || | | || | || || ||||| Sbjct 2868 TGATTTACAACTTGGAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAA 2809 Query 145115 GGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCC 145174 |||||||| || || || || || || |||||||| || | ||| || ||||| || Sbjct 2808 GGTTCAAATGATTCATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCT 2749 Query 145175 ACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCC 145234 | ||||| ||||| | || || ||||| || ||| |||| | | |||| | | Sbjct 2748 AATAATAAAGAATTTCTCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTTC 2689 Query 145235 CATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGG 145294 || || || || | | |||||||||||| || || || || | |||| ||| Sbjct 2688 CAAAGGTCGGTGGGGGTTTTGCTCCACATGTCGTATTGTAATATACCTTGACTGGATGGG 2629 Query 145295 CTGCCTT-GAAAGGAACTGTAACTGCCCCAAGTTTT-GGCGAGCTCGCAACTCGCCTCCA 145352 || |||| | ||| | ||| ||| | |||| || || || ||||| || || | Sbjct 2628 CTTCCTTCGTAAGTGTCATAAAC--CCCATACTTTTCTGCAAGTTCACAACTAGCTTCTA 2571 Query 145353 GAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCT 145412 | || ||| ||||||| || || ||||| || || ||||||| |||| || | Sbjct 2570 GTGCCCCGTAATAAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTT 2511 Query 145413 CGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGG 145472 | || | ||||||| || ||||| | ||| || ||||| || | || | || || | Sbjct 2510 CATATGCAATGCGCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAG 2451 Query 145473 GCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAA 145532 ||| ||| |||| || | || ||| | ||| ||||| |||| || || | Sbjct 2450 GCCTATGCCTCATATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGA 2391 Query 145533 TTTTATTCAAGTTTCGCACTACTACCTTT-GTAATGTGCCGCAACTTTTCAAAGTCAAAC 145591 ||||||| |||||| | | || || ||| || | | || || | ||| | | | Sbjct 2390 TTTTATTTAAGTTTTG-AGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATAT 2332 Query 145592 CGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651 || || | | || ||| | || | || || || || |||||||| || || Sbjct 2331 GTTTTATCTTC-ATTAACAAACA--TGTTCAAAGCAATAGATGCTAAATTACACACCGCG 2275 Query 145652 GTCTCCTCGGC-GTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGT 145710 || || || | || |||||| |||||||| | ||| || || |||||||| || || Sbjct 2274 ACTTCGTCAGCTGACG-TGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGT 2216 Query 145711 TCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGT 145768 || | || | || |||||||||||||| || ||||| ||||| ||||| || ||| Sbjct 2215 GCCTAAGTTCTTTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGT 2158 >seq67196 Length=1848 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | || || || | ||||| || || || |||||||| |||||||| | Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || | |||||| || || | || | ||||||||| || || ||| Sbjct 756 AAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGG 815 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| ||| | | |||| | | | ||| | |||||| | | |||| Sbjct 816 ATACCTTCTTTGTC-CTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGAC 874 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||||| || || | |||||| |||||||||||||| Sbjct 875 TTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCAT 922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470555088769920