Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 241 1e-58
seq131720 120 2e-22
seq67196 82.4 6e-11
>seq131719
Length=2163
Score = 241 bits (266), Expect = 1e-58
Identities = 419/603 (69%), Gaps = 11/603 (2%)
Strand=Plus/Minus
Query 96405 GTCAACTCGTACGTTTTGCCCGTTTGCAGTTGCAACTCGTCTAACATCACGCGCAATTCC 96464
||||||||||| | | || |||| | | ||||| |||||| |||||| ||||
Sbjct 2155 GTCAACTCGTATTTCCTTCCAGTTTCCGCCGAGAGCTCGTTCAACATCTCGCGCAGTTCC 2096
Query 96465 TTTAATAGAATGTTGTACGTGTCAGCGTCGCGCTCTTTG--TTGCCGAGCGTCGGGTTGG 96522
|| | |||| ||| | || |||| ||| | ||||||| | ||||| |
Sbjct 2095 TTCATCAGAAGTACGTAGATTTCTCCGTC-----CTTGGGCCTGCCGAGATTGGGGTTAG 2041
Query 96523 CGCCTTTACCGCCCGGAAATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCT 96582
|||||||||| || || || ||||| ||||| || || ||||| || |||||||| ||
Sbjct 2040 CGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTCCAGGTCT 1981
Query 96583 GCAAAAATTCTCTGACGGAGTCTACAAACACGCGC-CGTTTTTCCGCGTC-GTGCATGTA 96640
| | || ||| | ||||| | || || ||| | || ||| | ||| ||| | | |
Sbjct 1980 GGAGGAAGTCTTTTACGGAAGCAACGAA-ACGGTCACGCTTTGTCTTGTCAGTG-AAGAA 1923
Query 96641 ATAGAACGGGTCGGACAGTGTCCAGCCGCCGATAGACGGCAGAATTTTAAGGTGTGGATT 96700
| |||| || || | || ||||||||||||| || |||| ||| || |||| ||| |
Sbjct 1922 AAAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTGAGGTCTGGTCT 1863
Query 96701 AGCCAGTTTGGCCGCCATCAACTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGA 96760
||| |||| | ||||| || || ||||| |||||||| || |||||||| | |||
Sbjct 1862 CGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTTCCATGAAGA 1803
Query 96761 CACGCCCTTTTGCGGTTTTTGTACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATC 96820
| ||||||||| ||||| || | |||||||| ||||| ||||| | ||||| || ||
Sbjct 1802 AAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACACTTTGAAGTC 1743
Query 96821 TGAACGGCCCTGGCAAGAGCGTTGCAGCGCTTCAAAACTACCGGGTATGGTTTTAAGGGC 96880
| ||||| ||| || || || || || | ||||| || || || ||
Sbjct 1742 TTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATCTCCTTCAGACT 1683
Query 96881 ATCGTTAAGGCCGTCGCCGCCACAAATGGGTATAAACCCGTACAACAAATGTGACAAGTT 96940
||||| | ||||||||| || || || || || |||||||||||||| || | || ||
Sbjct 1682 GTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAGTGAGTCAGATT 1623
Query 96941 GGGCAGCGGCACTTTGTCCACCGGAAAGTTACGACCATACACGCCCCATTCCACAAAATA 97000
||| | |||||| |||||| || || || | |||||| |||||||| || || ||
Sbjct 1622 GGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACTCCCCATTCTACGAAGTA 1563
Query 97001 CGC 97003
||
Sbjct 1562 AGC 1560
>seq131720
Length=1042
Score = 120 bits (132), Expect = 2e-22
Identities = 429/660 (65%), Gaps = 22/660 (3%)
Strand=Plus/Minus
Query 95829 ATATTCATGGCATTAAGCAGATCGCCATTGTCAGCGTCTATTTCCCAGGCAAACAAACCT 95888
|| ||||| ||||| | | || |||||||| ||||| |||||||| || ||||||||
Sbjct 672 ATGTTCATAGCATTCAATATGTCACCATTGTCCGCGTCAATTTCCCACGCGAACAAACCA 613
Query 95889 CCTAACTTGTTTTGTTCCACATATCGACCTTTAGCTATAACAGAATCAACACTATCATAT 95948
|| || ||||| | | || ||| ||||| ||||||| || || || ||
Sbjct 612 CCCAATTTGTTATTTCTGACGTATTTGCCTTTCTCTATAACTGATCTGGCATCGTCGTAC 553
Query 95949 GAAATTAAATCGCCTTTGGTTTTATCAAAAACGTAGGCGGCTTTTGCTACGTTGTCAAAT 96008
| |||| ||| || ||| || || ||||| | |||| ||| || || ||| |
Sbjct 552 GTTATTAGATCTCCGGTGGCCTTCCTGAACACGTATGGCGCTTGTGCCACCTTATCATAA 493
Query 96009 T--TAA--CAATATATTTGTT--TATTTCGTTTTTGATTTGGCGATAATCAACAACGCCA 96062
| || | || | | ||| || | | |||| | || || || || |||
Sbjct 492 TGGTACTCCCATTTCCCAGCAGCTATATCATCTGCTATTTCTCTGTAGTCCACCACACCA 433
Query 96063 TCTTCCCAAGTGCCCGAAACGGG-CCCGTTACTACTTCCCAAAAAATAGTTATCGTTTTC 96121
|||| |||||| || ||| || |||||| | | | || ||| || || |||
Sbjct 432 TCTTGCCAAGTACCTTTAACAGGACCCGTTGC-ATTGCCAGTGAAAGGATTGTCACCTTC 374
Query 96122 GTAAT--TTGACACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAATAATTTTG 96179
||| | ||||| | |||||||| || ||||||||||| || || || | ||| ||
Sbjct 373 ATAACCGTGGACAC--CGGTCCAGCCACGTCCGTACATGGCAACACCAACCACAATCTTC 316
Query 96180 CGCGGGTCCACGCCTTGATTTGTGAGCAA---TTTAACGGCATGGTCCGTGTTGTACAGC 96236
|| | ||| ||||| | | ||| ||| ||| | || || |||| |
Sbjct 315 TTAGGATTCACACCTTGC---GCCAACAAGTATTTCACGCCGAAATCAGTCGTGTAAGTC 259
Query 96237 TCGTTTGGGTTCCAACTCGGCGCGTACAGTGTAGTTTGGTATCCCAAATCAATGTTTGAC 96296
|| || || | |||| || |||||||| | || |||| || | | | || |||
Sbjct 258 TCCTTCGGCTGCCAAGATGGAGCGTACAGAGAAGCCTGGTGACCAAGAGTATCATTGGAC 199
Query 96297 CACGCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTTGCGCAACG 96356
||||| || || |||||||||||||||| ||||| | ||| | | | || ||||| ||
Sbjct 198 CACGCTCCCTTGAAATCGTAGCTCATGAAGAATATGTGGTCCATGTATTTCTGCGCTGCG 139
Query 96357 TCGTATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCAACTCGTAC 96416
||| | || || || ||||| || |||||||| ||| |||||||||||
Sbjct 138 CTGTAATCGACGACTTGGATCTTGTCCCAACCAGCACTGATGGCAGACGTCAACTCGTAT 79
Query 96417 GTTTTGCCCGTTT--GCAGTTGCAACTCGTCTAACATCACGCGCAATTCCTTTAATAGAA 96474
| | || |||| |||| | ||||| |||||| |||||| |||||| | ||||
Sbjct 78 TTCCTTCCAGTTTCCGCAG--AGAGCTCGTTCAACATCTCGCGCAGTTCCTTCATCAGAA 21
>seq67196
Length=1848
Score = 82.4 bits (90), Expect = 6e-11
Identities = 159/233 (68%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || | || || | ||| | ||||| || ||||| || ||||| || | |
Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | |||| ||||| || || || ||| |||| || ||||| || || ||
Sbjct 756 AAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGG 815
Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| || |||||||| ||| | ||| || || | | | ||| || || ||
Sbjct 816 ATACCTTCTTTGTCCTGAATCTTAGCT--TTAACGTTCTCGATAGTATCTGAAGGTTCGA 873
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
||||| |||||| |||||||| |||| ||||| || |||||||||||| ||
Sbjct 874 CTTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATTATG 926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 403868247498370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |