Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq131719 241 1e-58 seq131720 120 2e-22 seq67196 82.4 6e-11 >seq131719 Length=2163 Score = 241 bits (266), Expect = 1e-58 Identities = 419/603 (69%), Gaps = 11/603 (2%) Strand=Plus/Minus Query 96405 GTCAACTCGTACGTTTTGCCCGTTTGCAGTTGCAACTCGTCTAACATCACGCGCAATTCC 96464 ||||||||||| | | || |||| | | ||||| |||||| |||||| |||| Sbjct 2155 GTCAACTCGTATTTCCTTCCAGTTTCCGCCGAGAGCTCGTTCAACATCTCGCGCAGTTCC 2096 Query 96465 TTTAATAGAATGTTGTACGTGTCAGCGTCGCGCTCTTTG--TTGCCGAGCGTCGGGTTGG 96522 || | |||| ||| | || |||| ||| | ||||||| | ||||| | Sbjct 2095 TTCATCAGAAGTACGTAGATTTCTCCGTC-----CTTGGGCCTGCCGAGATTGGGGTTAG 2041 Query 96523 CGCCTTTACCGCCCGGAAATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCT 96582 |||||||||| || || || ||||| ||||| || || ||||| || |||||||| || Sbjct 2040 CGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTCCAGGTCT 1981 Query 96583 GCAAAAATTCTCTGACGGAGTCTACAAACACGCGC-CGTTTTTCCGCGTC-GTGCATGTA 96640 | | || ||| | ||||| | || || ||| | || ||| | ||| ||| | | | Sbjct 1980 GGAGGAAGTCTTTTACGGAAGCAACGAA-ACGGTCACGCTTTGTCTTGTCAGTG-AAGAA 1923 Query 96641 ATAGAACGGGTCGGACAGTGTCCAGCCGCCGATAGACGGCAGAATTTTAAGGTGTGGATT 96700 | |||| || || | || ||||||||||||| || |||| ||| || |||| ||| | Sbjct 1922 AAAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTGAGGTCTGGTCT 1863 Query 96701 AGCCAGTTTGGCCGCCATCAACTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGA 96760 ||| |||| | ||||| || || ||||| |||||||| || |||||||| | ||| Sbjct 1862 CGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTTCCATGAAGA 1803 Query 96761 CACGCCCTTTTGCGGTTTTTGTACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATC 96820 | ||||||||| ||||| || | |||||||| ||||| ||||| | ||||| || || Sbjct 1802 AAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACACTTTGAAGTC 1743 Query 96821 TGAACGGCCCTGGCAAGAGCGTTGCAGCGCTTCAAAACTACCGGGTATGGTTTTAAGGGC 96880 | ||||| ||| || || || || || | ||||| || || || || Sbjct 1742 TTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATCTCCTTCAGACT 1683 Query 96881 ATCGTTAAGGCCGTCGCCGCCACAAATGGGTATAAACCCGTACAACAAATGTGACAAGTT 96940 ||||| | ||||||||| || || || || || |||||||||||||| || | || || Sbjct 1682 GTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAGTGAGTCAGATT 1623 Query 96941 GGGCAGCGGCACTTTGTCCACCGGAAAGTTACGACCATACACGCCCCATTCCACAAAATA 97000 ||| | |||||| |||||| || || || | |||||| |||||||| || || || Sbjct 1622 GGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACTCCCCATTCTACGAAGTA 1563 Query 97001 CGC 97003 || Sbjct 1562 AGC 1560 >seq131720 Length=1042 Score = 120 bits (132), Expect = 2e-22 Identities = 429/660 (65%), Gaps = 22/660 (3%) Strand=Plus/Minus Query 95829 ATATTCATGGCATTAAGCAGATCGCCATTGTCAGCGTCTATTTCCCAGGCAAACAAACCT 95888 || ||||| ||||| | | || |||||||| ||||| |||||||| || |||||||| Sbjct 672 ATGTTCATAGCATTCAATATGTCACCATTGTCCGCGTCAATTTCCCACGCGAACAAACCA 613 Query 95889 CCTAACTTGTTTTGTTCCACATATCGACCTTTAGCTATAACAGAATCAACACTATCATAT 95948 || || ||||| | | || ||| ||||| ||||||| || || || || Sbjct 612 CCCAATTTGTTATTTCTGACGTATTTGCCTTTCTCTATAACTGATCTGGCATCGTCGTAC 553 Query 95949 GAAATTAAATCGCCTTTGGTTTTATCAAAAACGTAGGCGGCTTTTGCTACGTTGTCAAAT 96008 | |||| ||| || ||| || || ||||| | |||| ||| || || ||| | Sbjct 552 GTTATTAGATCTCCGGTGGCCTTCCTGAACACGTATGGCGCTTGTGCCACCTTATCATAA 493 Query 96009 T--TAA--CAATATATTTGTT--TATTTCGTTTTTGATTTGGCGATAATCAACAACGCCA 96062 | || | || | | ||| || | | |||| | || || || || ||| Sbjct 492 TGGTACTCCCATTTCCCAGCAGCTATATCATCTGCTATTTCTCTGTAGTCCACCACACCA 433 Query 96063 TCTTCCCAAGTGCCCGAAACGGG-CCCGTTACTACTTCCCAAAAAATAGTTATCGTTTTC 96121 |||| |||||| || ||| || |||||| | | | || ||| || || ||| Sbjct 432 TCTTGCCAAGTACCTTTAACAGGACCCGTTGC-ATTGCCAGTGAAAGGATTGTCACCTTC 374 Query 96122 GTAAT--TTGACACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAATAATTTTG 96179 ||| | ||||| | |||||||| || ||||||||||| || || || | ||| || Sbjct 373 ATAACCGTGGACAC--CGGTCCAGCCACGTCCGTACATGGCAACACCAACCACAATCTTC 316 Query 96180 CGCGGGTCCACGCCTTGATTTGTGAGCAA---TTTAACGGCATGGTCCGTGTTGTACAGC 96236 || | ||| ||||| | | ||| ||| ||| | || || |||| | Sbjct 315 TTAGGATTCACACCTTGC---GCCAACAAGTATTTCACGCCGAAATCAGTCGTGTAAGTC 259 Query 96237 TCGTTTGGGTTCCAACTCGGCGCGTACAGTGTAGTTTGGTATCCCAAATCAATGTTTGAC 96296 || || || | |||| || |||||||| | || |||| || | | | || ||| Sbjct 258 TCCTTCGGCTGCCAAGATGGAGCGTACAGAGAAGCCTGGTGACCAAGAGTATCATTGGAC 199 Query 96297 CACGCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTTGCGCAACG 96356 ||||| || || |||||||||||||||| ||||| | ||| | | | || ||||| || Sbjct 198 CACGCTCCCTTGAAATCGTAGCTCATGAAGAATATGTGGTCCATGTATTTCTGCGCTGCG 139 Query 96357 TCGTATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCAACTCGTAC 96416 ||| | || || || ||||| || |||||||| ||| ||||||||||| Sbjct 138 CTGTAATCGACGACTTGGATCTTGTCCCAACCAGCACTGATGGCAGACGTCAACTCGTAT 79 Query 96417 GTTTTGCCCGTTT--GCAGTTGCAACTCGTCTAACATCACGCGCAATTCCTTTAATAGAA 96474 | | || |||| |||| | ||||| |||||| |||||| |||||| | |||| Sbjct 78 TTCCTTCCAGTTTCCGCAG--AGAGCTCGTTCAACATCTCGCGCAGTTCCTTCATCAGAA 21 >seq67196 Length=1848 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/233 (68%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | ||| | ||||| || ||||| || ||||| || | | Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | |||| ||||| || || || ||| |||| || ||||| || || || Sbjct 756 AAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGG 815 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || |||||||| ||| | ||| || || | | | ||| || || || Sbjct 816 ATACCTTCTTTGTCCTGAATCTTAGCT--TTAACGTTCTCGATAGTATCTGAAGGTTCGA 873 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 ||||| |||||| |||||||| |||| ||||| || |||||||||||| || Sbjct 874 CTTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATTATG 926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403868247498370