Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq67196 147 1e-30 seq15021 123 2e-23 seq193007 95.1 8e-15 >seq67196 Length=1848 Score = 147 bits (162), Expect = 1e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 ||| | |||| || ||||||||||||||||| |||||| ||| |||| || || || Sbjct 719 ATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCGTCTTCCAACTG 778 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 ||||| ||||| || || || || ||||| | ||||| |||||||||||| ||| || Sbjct 779 CTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTGTCCTGAATCTT 838 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 || || |||| || ||||||| | ||| ||||| || || || ||||| || || Sbjct 839 AGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGATCGTTTTTCCAGT 898 Query 38294 CAAGGTTTTCACGAATATCTGCAT 38317 ||| ||||||||||| |||||||| Sbjct 899 CAAAGTTTTCACGAAAATCTGCAT 922 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | |||||| |||| |||||| ||| || ||||| ||||| || |||| Sbjct 238 TACCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAG 297 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || | |||||||| ||||| || || ||||||||||| | | Sbjct 298 ATAGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCG 357 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| || ||| ||| || || ||||| | | || || |||| Sbjct 358 GAATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAA 417 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||| || ||||||||||| ||||||||||| || || |||||||| Sbjct 418 CTTCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||||| || | ||| | ||| || || ||||||||||| |||| Sbjct 10 TACCACCACGGAGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAG 69 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || | |||||| || || || || || | || || || | || Sbjct 70 ATAGGGTGCGCCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGG 129 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || || || || ||| || || ||||||| | ||| ||| || | Sbjct 130 GGATCCCCTCCTTATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTA 189 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||| |||||||||||||| ||||||||||| || || |||||||| Sbjct 190 CCTCTAGAGTAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | || ||||| || | ||| | ||| || || ||||||||||| |||| Sbjct 466 TACCACCACGCAGACGCAGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAG 525 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| | || || | |||||| || ||||| || | | || || || | || Sbjct 526 ATAGGGTACGCCCATCTTCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGG 585 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| || || |||||| ||| || || | | || || |||| Sbjct 586 GGATCCCTTCCTTATCTTGAATTTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCAA 645 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | |||||||||||| || || | |||||| || || |||||||| Sbjct 646 CTTCAAGTGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATCTGCAT 694 >seq15021 Length=1916 Score = 123 bits (136), Expect = 2e-23 Identities = 175/246 (71%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 38072 AATACAAATCCAATCATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTT 38131 || |||||| ||| |||||| ||||| | | |||||||| |||||||| || || Sbjct 973 AAAACAAATGTAATAATTACCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTT 914 Query 38132 TTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAG 38191 ||||||||||||||||| | || |||| || |||||||| || ||||| || | Sbjct 913 CTGAATATTGTAATCAGAAAGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAA 854 Query 38192 GCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGAC 38251 ||||||||||| | || | || ||||| || ||| || |||||||| | | Sbjct 853 TCGTTGTTGATCAGGAGGAATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTAT 794 Query 38252 AGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATAT 38311 ||| || | || || |||| || || || || ||||| | |||||| |||||||| Sbjct 793 AGTGTCGGAAGCCTCCACCTCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATAT 734 Query 38312 CTGCAT 38317 |||||| Sbjct 733 CTGCAT 728 >seq193007 Length=659 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 || || || |||||||| || || | ||| | || || | ||||||||| ||||| Sbjct 440 TCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAG 499 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || || || ||||| || | ||| | ||||||||||| |||||| || |||||| Sbjct 500 ATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGAATTTTGGCTTTGACATTC 559 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | | ||| || |||||||||||| || |||||||| || || | || || || Sbjct 560 TCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTTTGCCAGTAAGTGTCTTGACA 619 Query 38307 AATATCTGCATG 38318 || ||||||||| Sbjct 620 AAGATCTGCATG 631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 333938647080353