Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq168888 489 2e-133
seq105002 86.0 8e-12
>seq168888
Length=4095
Score = 489 bits (542), Expect = 2e-133
Identities = 1156/1733 (67%), Gaps = 26/1733 (2%)
Strand=Plus/Minus
Query 61888 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 61947
||| ||||| || ||||| ||||| | |||| | ||||| || || |||| |||
Sbjct 3166 ATAATACATGCCGGTTTTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTT 3107
Query 61948 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 62007
||| | || || |||| ||| || || | ||| |||||||| || || || || ||
Sbjct 3106 ACCGTAATTTGGTTCAGCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACC 3047
Query 62008 CCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 62067
||| || |||||||||| || | || || | | ||||||| ||| ||||| |
Sbjct 3046 CCTATCGGCAGCCATTTGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAG 2987
Query 62068 -TCGCTTAATATCTTCTGGAA--GGTT-TGTATTCTGAATGGATCCACCATCTGCCATAA 62123
|| |||| | |||| |||| | || | |||| || || || ||| || || |
Sbjct 2986 ATCTCTTATT-TCTTTCGGAATAGCTTCTATATTTTGTATTGACCCATTATTGTGTATTA 2928
Query 62124 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 62183
| ||| || || || |||| ||| || | | || |||||| | | | | |||
Sbjct 2927 TAAGATTTTTCATGTCTTCATCCCACAAATCTGCTTCAGTTAAATCACGCAATAAATGAT 2868
Query 62184 GATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 62243
|||| || ||||| || || |||||||| ||||| | ||| ||||| || | |
Sbjct 2867 GATTTACAACTTGGAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAG 2808
Query 62244 GTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 62303
|||| | || ||||| || || | ||||||||| || ||||| || |||||||| || |
Sbjct 2807 GTTCAAATGATTCATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTA 2748
Query 62304 CCAATAAACTATTTCTAAGACCGTATGTTCTGA--TTTTATCTTTTAGAGGTTCCCAATT 62361
|||||| |||||| | ||| ||| | || || | ||||||| || ||||| ||
Sbjct 2747 ATAATAAAGAATTTCTCAAACC--ATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTT 2690
Query 62362 CCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTA 62421
|||||| || | || ||||| ||||| | |||||
Sbjct 2689 CCAAAGGTCGGTGGGGGTTTTGCTCCACATGTCGTATTGTAATATACCTTGACTGGATGG 2630
Query 62422 CGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAA 62481
|||| | || || || || || | ||| || || ||||||||||| || ||||
Sbjct 2629 GCTTCCTTCGTAAGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAG 2570
Query 62482 TGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATC 62541
||| ||||||||||||||||| || || | | ||| || | |||| | || ||
Sbjct 2569 TGCCCCGTAATAAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTTC 2510
Query 62542 AAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 62601
| ||| | | | | ||| | ||||||| |||||||||||||| || |||||
Sbjct 2509 ATATGCAATGCGCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGG 2450
Query 62602 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 62661
||||| ||| |||| || || || || || || ||||| |||||| ||| || ||
Sbjct 2449 CCTATGCCTCATATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGAT 2390
Query 62662 TTTATTGAGATTTCTGAC-AATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC 62720
|||||| | ||| ||| ||| | |||| || || || | ||| ||||| | ||
Sbjct 2389 TTTATTTAAGTTT-TGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATATG 2331
Query 62721 GCCCATCT--ATTA-CAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCT 62777
|||| |||| ||||||||||||| |||| |||||| | |||||| || || || |
Sbjct 2330 TTTTATCTTCATTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTT 2271
Query 62778 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 62837
| | ||| || |||| | ||||||||||| | |||||||| || || || ||||
Sbjct 2270 CGTCAGCTGACGTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTA 2211
Query 62838 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 62897
| || | ||| ||||| || ||||||| || || || ||||| || | || || || |
Sbjct 2210 AGTTCTTTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCG 2151
Query 62898 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGC-CT---TTATTATAGAT 62953
|||||| || | ||| || || |||||||| | ||| | || || | || | |
Sbjct 2150 TTTCAACTTGGGCTTCGATTATGGCTTTCCATAAAACTTGGGCGCTGACCTGTTTCACA- 2092
Query 62954 TTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA 63013
| | ||||||| |||||||| || ||| | |||||| || |||||||||
Sbjct 2091 ---AAACGCTTTTCTTTTTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCAACAG 2035
Query 63014 TTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 63073
| | | ||||||||| |||| |||||||| | ||| ||| | | | | |||
Sbjct 2034 TCAGCTAATCCAGGACAATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCAACT 1975
Query 63074 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCC 63133
| ||||||||| ||||| || ||||| | ||| ||| | |||| | || |||
Sbjct 1974 CTTTTCATAAAAAGATCCGGTATCCATAAAGCATAAAACAACTCTCGAGCTCGTACTTCT 1915
Query 63134 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 63193
|| || || || |||||||| || ||||| || | | ||| || | |||||| || ||
Sbjct 1914 TCTTTGCCAGTGTTCTTTTTGAGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGGCTCT 1855
Query 63194 AAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63253
|| || | || | | |||| || ||||| ||||| || ||||||| ||||| || |||
Sbjct 1854 AAATACACTGCAAAAGCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGCTGTG 1795
Query 63254 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATA 63313
|| || ||||| || | |||||| | | || || ||| |||||| || |||| ||||
Sbjct 1794 TTGTTGTAAACCCTAAGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGCGATA 1735
Query 63314 TAGCTTCCACTGGCACGAATATTACTAATTGATAGA--CCTATTCCCCCTGCCATTTTAG 63371
|| ||| | || | ||| | | | | | || || ||||| || || |||||
Sbjct 1734 TATGATCCTTTAGCTCTGATA-CAGTGAACG-TGGACTCCGATTCCACCAGCAGATTTAG 1677
Query 63372 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 63431
| || | || ||| ||||||| |||||||| || || || ||||| ||||| ||||
Sbjct 1676 ATATAAGCGCACATTGTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCATAG 1617
Query 63432 TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAG 63491
| |||||||| |||| ||| | || || | || || | ||| ||
Sbjct 1616 CTACAAGAAAACAAGATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGGGC 1557
Query 63492 AAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT 63551
||||| ||||| |||||||||| || | |||||| || | || || | |||||||
Sbjct 1556 TGGCGTGTGTAAAATATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATCTATAT 1497
Query 63552 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63604
| ||| || || | | || | ||| | ||| ||||| |||| ||||
Sbjct 1496 CTTCACCATGGATACCAATAGATACTCTCATCAGCATATGCTGTGGTCGTTCA 1444
>seq105002
Length=4868
Score = 86.0 bits (94), Expect = 8e-12
Identities = 115/159 (72%), Gaps = 1/159 (1%)
Strand=Plus/Minus
Query 63814 AAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGC 63873
|||| |||| | |||||||||||||| || |||| |||| || ||| |||| | ||
Sbjct 3815 AAAT-GTTTCTGAGTTTCTTTGTGTAGGTTGGATATAGCTAGTCGAGCAGCTAACACAGC 3757
Query 63874 ATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTC 63933
||| || ||||| | ||||| ||| || || |||| ||||| | | | || |||||
Sbjct 3756 ATAGTCAGGATGATTAGTAGTCATAGTTGCCGCGGTTTCTGCTGCTAAATTATCTAATTC 3697
Query 63934 TACCGTTGTTACACCATTATATATTCCTTGGATAACCTT 63972
|| |||||||||||| || || || | ||||| ||
Sbjct 3696 AACAGTTGTTACACCAGAGTAAATCCCATTTATAACTTT 3658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 631675162214800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |