Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 226 2e-54
seq15021 156 4e-33
seq67196 136 3e-27
seq193007 127 2e-24
>seq131719
Length=2163
Score = 226 bits (250), Expect = 2e-54
Identities = 347/492 (71%), Gaps = 2/492 (0%)
Strand=Plus/Minus
Query 57667 GGATTAGCACCATTACCACCAGGAAATTCCCAATCAATGTCGACTCCATCAAAAAATTTC 57726
|| ||||| || ||||| ||||| || |||||||| || ||||| || ||||| ||||||
Sbjct 2047 GGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTC 1988
Query 57727 CACACTTTGATGTAGTCGCGCACCGATTGCACAAAAGTGTTGCGAATAGTGTCGTC-GTG 57785
|| | || | |||| || || || ||| || || | || | ||| |||
Sbjct 1987 CAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTGTCTTGTCAGTG 1928
Query 57786 CATGAAAAAGAAGGGATCCGATAAGGTCCAACCACCAATGGATGGCAATACTTTTAGATG 57845
| ||||||||| ||||| | || ||||| || || | ||| ||||| | || || |
Sbjct 1927 AA-GAAAAAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTGAGGTC 1869
Query 57846 CGGATATGCTTTTTTGACCGCCATCAGTTGACCAAAATTACCTTTGTAAGGTTCGTTCCA 57905
|| || | ||| | | ||||||||| || || || ||||||||||||||||||||
Sbjct 1868 TGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTTCCA 1809
Query 57906 AGCCGATACTCCTTGTTGAGGCTTTTGTAGCGCCGCCCAAGGATCGTGTATCGTTACTTT 57965
| || | || | ||| || || || || || ||||| || || || || | |||||
Sbjct 1808 TGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACACTTT 1749
Query 57966 GAAATCTTCTCGGCCTGCACACGAACGTTGCAACGCTTCAAAACTACCTGTAATCGTCTT 58025
||| ||||| ||||| || ||||| || | || | ||||| || |||| |||
Sbjct 1748 GAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATCTCCTT 1689
Query 58026 TAGACTGTCGTTGATGCCATCGCCTCCGCAAATAGGCACGAAACCGTACAACAAATGAGT 58085
||||||||||||||||| ||||||||||| || || | ||| ||||||||||| |||||
Sbjct 1688 CAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAGTGAGT 1629
Query 58086 CAAATTGGGTACGGGTACTTTATCAACTGGATATTTACGACCGTACACACTCCACTCCAC 58145
|| |||||| | || || || || || | || | ||||| | ||| || ||
Sbjct 1628 CAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACTCCCCATTCTAC 1569
Query 58146 GAAATAAGCTCC 58157
||| ||||||||
Sbjct 1568 GAAGTAAGCTCC 1557
>seq15021
Length=1916
Score = 156 bits (172), Expect = 4e-33
Identities = 180/240 (75%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
|||||||| ||||| ||||| || | || || || ||||||| | || |||||| |
Sbjct 725 ACAATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGGCT 784
Query 25056 TCTGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| |||||||| || |||| || || | ||| || ||||| || ||||| |||||
Sbjct 785 TCCGACACTATAGAAAATGTGAAAGCCAAGATTCAA-GATAAAGAGGGTATTCCTCCTGA 843
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || | || ||||| || |||||||| ||||| | ||||| | |||||
Sbjct 844 TCAACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCTGATTA 903
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTATTA 25234
||||||||| |||||||| || || || || ||| ||||||| |||||||| ||||||||
Sbjct 904 CAATATTCAGAAAGAATCTACTCTTCACTTGGTGTTAAGGCTCAGAGGAGGTAATTATTA 963
>seq67196
Length=1848
Score = 136 bits (150), Expect = 3e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || || || || |||||||| || ||| | ||||| | ||||| || | ||
Sbjct 923 AATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTC 864
Query 25058 TGACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|| ||||||||| | | |||| || | ||| ||||||||||| || || || || |
Sbjct 863 AGATACTATCGAGAACGTTAAAGCTAAGATTCAG-GACAAAGAAGGTATCCCCCCAGATC 805
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||||| | |||||||| || || || || ||||| | || ||| || |||||||
Sbjct 804 AGCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTACA 745
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||||||||||||||| ||||| | || ||| | || | |||||
Sbjct 744 ATATTCAAAAAGAATCCACTTTACATCTTGTTCTACGACTTCGCGGAGG 696
Score = 113 bits (124), Expect = 4e-20
Identities = 151/208 (73%), Gaps = 8/208 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || || ||||| |||||| | ||||| | ||||| ||| | |||
Sbjct 466 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATCACTCTAGAAGTTGAGCCATCT 407
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || |||| |||| || | ||| || || ||||| ||||| || ||
Sbjct 406 GACACCATTGAAAATGTCA---AAGCCAAGATTCAG-GATAAGGAAGGTATTCCGCCAGA 351
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || | || ||||| || ||||| | ||||||| ||||| | || ||
Sbjct 350 TCAACAACGTCTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACCCTATCTGACTA 291
Query 25175 CAATATTCAAAAAGAATCCACGCTACAT 25202
||||| |||||||||||||| || |||
Sbjct 290 TAATATCCAAAAAGAATCCACCCTTCAT 263
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || || | || || ||| | || ||| | ||||| ||| | ||
Sbjct 694 ATGCAGATCTTTGTTAAAACCCTTACTGGCAAAACTATTACACTTGAAGTTGAGCCATCG 635
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| | |||| ||| || || |||||||| || || |||||
Sbjct 634 GACACAATTGAAAACGTTAAGGCTAAAATTCAA-GATAAGGAAGGGATCCCCCCAGACCA 576
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | || |||||||| ||||||||| | ||||||| || || | || |||||
Sbjct 575 GCAGAGAATGATTTTTGCTGGCAAACAACTTGAAGATGGGCGTACCCTATCTGACTACAA 516
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||| |||||||| || | ||| |||| ||
Sbjct 515 TATTCAGAAAGAATCTACTTTGCATCTAGTACT 483
Score = 105 bits (116), Expect = 6e-18
Identities = 145/200 (73%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || || ||||| |||||| | || || | || || ||| | ||
Sbjct 238 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATTACTCTAGAGGTAGAGCCATCA 179
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| ||| | || |||| || | ||| || || || ||||| || || |||
Sbjct 178 GACACTATTGAG--AATGTAAAAGCCAAGATTCAA-GATAAGGAGGGGATCCCCCCAGAC 122
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||| | | ||||| || ||||||||| | ||||||| ||||| | || |||
Sbjct 121 CAGCAGAGACTGATTTTCGCTGGCAAACAACTTGAAGATGGGCGCACCCTATCTGACTAC 62
Query 25176 AATATTCAAAAAGAATCCAC 25195
|||||||| |||||||| ||
Sbjct 61 AATATTCAGAAAGAATCTAC 42
>seq193007
Length=659
Score = 127 bits (140), Expect = 2e-24
Identities = 150/200 (75%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| | || || ||| | ||||| | ||||| || | ||
Sbjct 630 ATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATCG 571
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| ||| | || |||| |||| ||| ||||||||||| ||||| || |||
Sbjct 570 GACACTATTGAG--AATGTCAAAGCCAAAATTCAA-GACAAAGAAGGTATTCCCCCAGAC 514
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|||||||| |||| ||||| || |||||| | ||||||| ||||| | ||| |||
Sbjct 513 CAACAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTATCCGACTAC 454
Query 25176 AATATTCAAAAAGAATCCAC 25195
||||| || |||||||| ||
Sbjct 453 AATATCCAGAAAGAATCTAC 434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 432023214590345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |