Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq131719 226 2e-54 seq15021 156 4e-33 seq67196 136 3e-27 seq193007 127 2e-24 >seq131719 Length=2163 Score = 226 bits (250), Expect = 2e-54 Identities = 347/492 (71%), Gaps = 2/492 (0%) Strand=Plus/Minus Query 57667 GGATTAGCACCATTACCACCAGGAAATTCCCAATCAATGTCGACTCCATCAAAAAATTTC 57726 || ||||| || ||||| ||||| || |||||||| || ||||| || ||||| |||||| Sbjct 2047 GGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTC 1988 Query 57727 CACACTTTGATGTAGTCGCGCACCGATTGCACAAAAGTGTTGCGAATAGTGTCGTC-GTG 57785 || | || | |||| || || || ||| || || | || | ||| ||| Sbjct 1987 CAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTGTCTTGTCAGTG 1928 Query 57786 CATGAAAAAGAAGGGATCCGATAAGGTCCAACCACCAATGGATGGCAATACTTTTAGATG 57845 | ||||||||| ||||| | || ||||| || || | ||| ||||| | || || | Sbjct 1927 AA-GAAAAAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTGAGGTC 1869 Query 57846 CGGATATGCTTTTTTGACCGCCATCAGTTGACCAAAATTACCTTTGTAAGGTTCGTTCCA 57905 || || | ||| | | ||||||||| || || || |||||||||||||||||||| Sbjct 1868 TGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTTCCA 1809 Query 57906 AGCCGATACTCCTTGTTGAGGCTTTTGTAGCGCCGCCCAAGGATCGTGTATCGTTACTTT 57965 | || | || | ||| || || || || || ||||| || || || || | ||||| Sbjct 1808 TGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACACTTT 1749 Query 57966 GAAATCTTCTCGGCCTGCACACGAACGTTGCAACGCTTCAAAACTACCTGTAATCGTCTT 58025 ||| ||||| ||||| || ||||| || | || | ||||| || |||| ||| Sbjct 1748 GAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATCTCCTT 1689 Query 58026 TAGACTGTCGTTGATGCCATCGCCTCCGCAAATAGGCACGAAACCGTACAACAAATGAGT 58085 ||||||||||||||||| ||||||||||| || || | ||| ||||||||||| ||||| Sbjct 1688 CAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAGTGAGT 1629 Query 58086 CAAATTGGGTACGGGTACTTTATCAACTGGATATTTACGACCGTACACACTCCACTCCAC 58145 || |||||| | || || || || || | || | ||||| | ||| || || Sbjct 1628 CAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACTCCCCATTCTAC 1569 Query 58146 GAAATAAGCTCC 58157 ||| |||||||| Sbjct 1568 GAAGTAAGCTCC 1557 >seq15021 Length=1916 Score = 156 bits (172), Expect = 4e-33 Identities = 180/240 (75%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 |||||||| ||||| ||||| || | || || || ||||||| | || |||||| | Sbjct 725 ACAATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGGCT 784 Query 25056 TCTGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || |||||||| || |||| || || | ||| || ||||| || ||||| ||||| Sbjct 785 TCCGACACTATAGAAAATGTGAAAGCCAAGATTCAA-GATAAAGAGGGTATTCCTCCTGA 843 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| || | || ||||| || |||||||| ||||| | ||||| | ||||| Sbjct 844 TCAACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCTGATTA 903 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTATTA 25234 ||||||||| |||||||| || || || || ||| ||||||| |||||||| |||||||| Sbjct 904 CAATATTCAGAAAGAATCTACTCTTCACTTGGTGTTAAGGCTCAGAGGAGGTAATTATTA 963 >seq67196 Length=1848 Score = 136 bits (150), Expect = 3e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || |||||||| || ||| | ||||| | ||||| || | || Sbjct 923 AATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTC 864 Query 25058 TGACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || ||||||||| | | |||| || | ||| ||||||||||| || || || || | Sbjct 863 AGATACTATCGAGAACGTTAAAGCTAAGATTCAG-GACAAAGAAGGTATCCCCCCAGATC 805 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | |||||||| || || || || ||||| | || ||| || ||||||| Sbjct 804 AGCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTACA 745 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||||||||||| ||||| | || ||| | || | ||||| Sbjct 744 ATATTCAAAAAGAATCCACTTTACATCTTGTTCTACGACTTCGCGGAGG 696 Score = 113 bits (124), Expect = 4e-20 Identities = 151/208 (73%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || ||||| |||||| | ||||| | ||||| ||| | ||| Sbjct 466 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATCACTCTAGAAGTTGAGCCATCT 407 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || |||| |||| || | ||| || || ||||| ||||| || || Sbjct 406 GACACCATTGAAAATGTCA---AAGCCAAGATTCAG-GATAAGGAAGGTATTCCGCCAGA 351 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| || | || ||||| || ||||| | ||||||| ||||| | || || Sbjct 350 TCAACAACGTCTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACCCTATCTGACTA 291 Query 25175 CAATATTCAAAAAGAATCCACGCTACAT 25202 ||||| |||||||||||||| || ||| Sbjct 290 TAATATCCAAAAAGAATCCACCCTTCAT 263 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || | || || ||| | || ||| | ||||| ||| | || Sbjct 694 ATGCAGATCTTTGTTAAAACCCTTACTGGCAAAACTATTACACTTGAAGTTGAGCCATCG 635 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| | |||| ||| || || |||||||| || || ||||| Sbjct 634 GACACAATTGAAAACGTTAAGGCTAAAATTCAA-GATAAGGAAGGGATCCCCCCAGACCA 576 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | || |||||||| ||||||||| | ||||||| || || | || ||||| Sbjct 575 GCAGAGAATGATTTTTGCTGGCAAACAACTTGAAGATGGGCGTACCCTATCTGACTACAA 516 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||| |||||||| || | ||| |||| || Sbjct 515 TATTCAGAAAGAATCTACTTTGCATCTAGTACT 483 Score = 105 bits (116), Expect = 6e-18 Identities = 145/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || ||||| |||||| | || || | || || ||| | || Sbjct 238 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATTACTCTAGAGGTAGAGCCATCA 179 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| ||| | || |||| || | ||| || || || ||||| || || ||| Sbjct 178 GACACTATTGAG--AATGTAAAAGCCAAGATTCAA-GATAAGGAGGGGATCCCCCCAGAC 122 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| | | ||||| || ||||||||| | ||||||| ||||| | || ||| Sbjct 121 CAGCAGAGACTGATTTTCGCTGGCAAACAACTTGAAGATGGGCGCACCCTATCTGACTAC 62 Query 25176 AATATTCAAAAAGAATCCAC 25195 |||||||| |||||||| || Sbjct 61 AATATTCAGAAAGAATCTAC 42 >seq193007 Length=659 Score = 127 bits (140), Expect = 2e-24 Identities = 150/200 (75%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || ||| | ||||| | ||||| || | || Sbjct 630 ATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATCG 571 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| ||| | || |||| |||| ||| ||||||||||| ||||| || ||| Sbjct 570 GACACTATTGAG--AATGTCAAAGCCAAAATTCAA-GACAAAGAAGGTATTCCCCCAGAC 514 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| |||| ||||| || |||||| | ||||||| ||||| | ||| ||| Sbjct 513 CAACAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTATCCGACTAC 454 Query 25176 AATATTCAAAAAGAATCCAC 25195 ||||| || |||||||| || Sbjct 453 AATATCCAGAAAGAATCTAC 434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432023214590345