Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq131719 264 1e-65 seq131720 86.0 7e-12 >seq131719 Length=2163 Score = 264 bits (292), Expect = 1e-65 Identities = 363/501 (72%), Gaps = 6/501 (1%) Strand=Plus/Minus Query 51941 GCCCAGGTCGGGATTGGCGCCTTTGCCGCCCGGAAACTCCCAGTCGACGTCGACTCCGTC 52000 ||| || | ||| || |||||||| || || || |||||||| |||| ||||| ||||| Sbjct 2057 GCCGAGATTGGGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTC 1998 Query 52001 GAAGAACTTCCAAGTCAGCAGAAACTCGCGAACCGATTCGACGAA--GGTTGCGCGTTTG 52058 ||||| ||||| ||| | || || || || || | ||||| ||| ||| |||| Sbjct 1997 AAAGAATTTCCAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGC-TTTG 1939 Query 52059 CTCGCGTC-GTGCAGGAAGAAGAACGGATCGGACAGCGTCCAACCGCCGATCGAGGGCAG 52117 || ||| ||| || || ||||| ||||| | || ||||| ||||||| || |||| Sbjct 1938 -TCTTGTCAGTGAAGAAA-AAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAA 1881 Query 52118 AATCTTGAGCGAAGGATTGGCCCGTTTGGCCGCCATCAGCTGTCCAAAGTTTCCCTTGTA 52177 ||||||||| || | ||| |||| | |||||| || || |||||||| ||||| Sbjct 1880 AATCTTGAGGTCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTA 1821 Query 52178 CGGATCGTTCCAGGCCGAGACGCCTTTCTGCGGTTTCTGCAGCGCCGCCCAGGGATCGTG 52237 || |||||||| | || | ||| || || |||||||| || || |||||||| || || Sbjct 1820 AGGTTCGTTCCATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATG 1761 Query 52238 AATCGTCACCTTAAAGTCCGACCTGCCCACGCACGACCGTTGCAACGCTTCGAAACTGTT 52297 ||| | ||| || ||||| | ||| ||| || || || | || | ||||||| Sbjct 1760 AATGGACACTTTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCC 1701 Query 52298 GTCGATCGGTTTCAGGCTGTCGTTGATGCCGTCGCCTCCGCACATGGGAATGAAGCCGTA 52357 || ||| ||||| |||||||||||||||||||||||||| || |||||||| ||||| Sbjct 1700 CTCAATCTCCTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTA 1641 Query 52358 CAGCAGATGCGACAGGTTCGGCAACGGCACCAGATCTACGGGAAAGTTGCGCAAGTAAAC 52417 || || || | ||| || || | |||||| | || ||||| || || | | || || Sbjct 1640 CAACAAGTGAGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACAC 1581 Query 52418 GCCCCATTCGACAAAGTAGGC 52438 |||||||| || ||||| || Sbjct 1580 TCCCCATTCTACGAAGTAAGC 1560 >seq131720 Length=1042 Score = 86.0 bits (94), Expect = 7e-12 Identities = 87/111 (78%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 51726 TTGGACCACGCACCCTTGAAATCGTAGTTCATGAGGAAAATGTAATCCAACTGCGTCTGC 51785 ||||||||||| ||||||||||||||| |||||| ||| |||| |||| | ||||| Sbjct 204 TTGGACCACGCTCCCTTGAAATCGTAGCTCATGAAGAATATGTGGTCCATGTATTTCTGC 145 Query 51786 GCCCGAGC-GTAGTCGACGACTTGAATTTTATCGTAGCCCGCGCTGATGGC 51835 || | || ||| ||||||||||| || || || | || || |||||||| Sbjct 144 GCT-GCGCTGTAATCGACGACTTGGATCTTGTCCCAACCAGCACTGATGGC 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535942926757480