Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq67196 159 6e-34
seq193007 158 2e-33
seq15021 143 5e-29
seq155643 93.3 8e-14
>seq67196
Length=1848
Score = 159 bits (176), Expect = 6e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||||||||| || | || | |||| ||||| |||||||| || || ||||| ||
Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | || ||||| |||||||| || || || || || | || || || || ||
Sbjct 756 AAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGG 815
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||| ||||| |||||||| || || ||| |||||| || |||| | ||| |||
Sbjct 816 ATACCTTCTTTGTCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACT 875
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
||||||||||| |||||||| || | || || ||||| ||||||||||||
Sbjct 876 TCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATTATG 926
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || ||||| |||| || || ||||| ||||||||||| ||||| || ||
Sbjct 240 CCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGAT 299
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | ||| || || || || || || | |||||| || || |||
Sbjct 300 AGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGA 359
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| |||||||| || |||||||| || ||||| || |||||||| | || || |||
Sbjct 360 ATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACT 419
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||| ||||| || || | ||| || || || ||||||||
Sbjct 420 TCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| ||| | || | || || ||||| || || || || || ||
Sbjct 12 CCACCACGGAGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 71
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||||||| | || || || ||||| || ||||| || ||||| || ||
Sbjct 72 AGGGTGCGCCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGG 131
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| ||||||||||| || || || ||| || ||||||| || |||||
Sbjct 132 ATCCCCTCCTTATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTACC 191
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || || ||||| || || | ||| || || || ||||||||
Sbjct 192 TCTAGAGTAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238
>seq193007
Length=659
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||||||| | || || ||||| ||||| || || |||||
Sbjct 404 CCACCACGGAGGCGGAGAACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGAT 463
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||| | |||||||| | || || || || || || || | |||||||| || |||
Sbjct 464 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGA 523
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||| ||||||||||| || || ||||| ||| || ||||| | || ||| |||
Sbjct 524 ATACCTTCTTTGTCTTGAATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACT 583
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || ||||| ||||| || || || |||||||| || ||||||||
Sbjct 584 TCTAAAGTGATAGTTTTGCCAGTAAGTGTCTTGACAAAGATCTGCAT 630
>seq15021
Length=1916
Score = 143 bits (158), Expect = 5e-29
Identities = 172/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288
||||| ||||| | || | || |||||||| || || || ||||| || || || |||
Sbjct 960 TAATTACCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAA 901
Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348
|| || ||||| | || ||||| || || || || || || || | || |||||| ||
Sbjct 900 TCAGAAAGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCA 841
Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408
|| ||||| || || || ||||||||||| || || || || || ||||| | |
Sbjct 840 GGAGGAATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCC 781
Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || || | ||||||||| || ||||| ||||| || |||||||||||||||
Sbjct 780 TCCACCTCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCATT 727
>seq155643
Length=230
Score = 93.3 bits (102), Expect = 8e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 268367 GTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATG 268426
||||| || | ||| ||||| |||| || || | |||||||| |||||||| || ||
Sbjct 161 GTGATCTTCCTGGTGACGAAGTTCTCCCCCCGGCGCGGGCTCTCATGGTTGAACAGAATC 102
Query 268427 CCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAAC 268486
||||| || |||||||| || || ||||| ||||||||||| || |||| || | |
Sbjct 101 CCGTTACAGGCGAACATTCCGTACGCCTCCCGGTAGTTCACCACTATCCATTAGCCGTAG 42
Query 268487 ATCTTTGCA 268495
| |||||||
Sbjct 41 AGCTTTGCA 33
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918776165062360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |