Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq67196 159 6e-34 seq193007 158 2e-33 seq15021 143 5e-29 seq155643 93.3 8e-14 >seq67196 Length=1848 Score = 159 bits (176), Expect = 6e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||||||||| || | || | |||| ||||| |||||||| || || ||||| || Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || ||||| |||||||| || || || || || | || || || || || Sbjct 756 AAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGG 815 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| ||||| |||||||| || || ||| |||||| || |||| | ||| ||| Sbjct 816 ATACCTTCTTTGTCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACT 875 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||||||||| |||||||| || | || || ||||| |||||||||||| Sbjct 876 TCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATTATG 926 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || ||||| |||| || || ||||| ||||||||||| ||||| || || Sbjct 240 CCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGAT 299 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||| || || || || || || | |||||| || || ||| Sbjct 300 AGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGA 359 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| || |||||||| || ||||| || |||||||| | || || ||| Sbjct 360 ATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACT 419 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| ||||| || || | ||| || || || |||||||| Sbjct 420 TCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| ||| | || | || || ||||| || || || || || || Sbjct 12 CCACCACGGAGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 71 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||||||| | || || || ||||| || ||||| || ||||| || || Sbjct 72 AGGGTGCGCCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGG 131 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| ||||||||||| || || || ||| || ||||||| || ||||| Sbjct 132 ATCCCCTCCTTATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTACC 191 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || ||||| || || | ||| || || || |||||||| Sbjct 192 TCTAGAGTAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238 >seq193007 Length=659 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| | || || ||||| ||||| || || ||||| Sbjct 404 CCACCACGGAGGCGGAGAACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGAT 463 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | |||||||| | || || || || || || || | |||||||| || ||| Sbjct 464 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGA 523 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| ||||||||||| || || ||||| ||| || ||||| | || ||| ||| Sbjct 524 ATACCTTCTTTGTCTTGAATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACT 583 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| ||||| || || || |||||||| || |||||||| Sbjct 584 TCTAAAGTGATAGTTTTGCCAGTAAGTGTCTTGACAAAGATCTGCAT 630 >seq15021 Length=1916 Score = 143 bits (158), Expect = 5e-29 Identities = 172/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 ||||| ||||| | || | || |||||||| || || || ||||| || || || ||| Sbjct 960 TAATTACCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAA 901 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 || || ||||| | || ||||| || || || || || || || | || |||||| || Sbjct 900 TCAGAAAGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCA 841 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408 || ||||| || || || ||||||||||| || || || || || ||||| | | Sbjct 840 GGAGGAATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCC 781 Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | ||||||||| || ||||| ||||| || ||||||||||||||| Sbjct 780 TCCACCTCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCATT 727 >seq155643 Length=230 Score = 93.3 bits (102), Expect = 8e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 268367 GTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATG 268426 ||||| || | ||| ||||| |||| || || | |||||||| |||||||| || || Sbjct 161 GTGATCTTCCTGGTGACGAAGTTCTCCCCCCGGCGCGGGCTCTCATGGTTGAACAGAATC 102 Query 268427 CCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAAC 268486 ||||| || |||||||| || || ||||| ||||||||||| || |||| || | | Sbjct 101 CCGTTACAGGCGAACATTCCGTACGCCTCCCGGTAGTTCACCACTATCCATTAGCCGTAG 42 Query 268487 ATCTTTGCA 268495 | ||||||| Sbjct 41 AGCTTTGCA 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918776165062360