Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq131719 190 1e-43 seq15021 98.7 7e-16 seq67196 89.7 4e-13 seq193007 87.8 1e-12 >seq131719 Length=2163 Score = 190 bits (210), Expect = 1e-43 Identities = 340/494 (69%), Gaps = 12/494 (2%) Strand=Plus/Minus Query 84237 GGGTTGGCTCCTTTGCCTCCCGGAAATTCCCAATCGATGTCTACACCGTCGAAAAATTTC 84296 ||||| || ||||| ||||| || || ||||||||||| || || ||||| || |||||| Sbjct 2047 GGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTC 1988 Query 84297 CATACTTGTAAAAACTCCTTAACCGAATTTACAAAA-----ACG-TTTCTTTTTTCAACA 84350 || || | || || || || ||| || ||| ||| ||| | || ||| Sbjct 1987 CAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTGTCTTGTCA--- 1931 Query 84351 TTGTGCATGAAATAAAACGGGTCCGACAACGTCCATCCTCCTATGGACGGAAGAATCTTT 84410 ||| | |||| | || || || | ||| ||||| || || | ||| || | |||||| Sbjct 1930 --GTGAA-GAAAAAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTG 1874 Query 84411 AGGTGCGGGTTCGCCAATTTAGCTGCCATCAATTGTCCAAAATTGCCTTTATACGGTTCG 84470 |||| || ||||| ||| ||||| ||| || || || ||||| || |||||| Sbjct 1873 AGGTCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCG 1814 Query 84471 TTCCAAGCGGACACGCCCTTTTGGGGCTTTTGTACGGCGGCCCACGGATCGTGGATGGCA 84530 ||||| | || | ||||||||| || || || | |||||||| || || || |||| Sbjct 1813 TTCCATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGAC 1754 Query 84531 ATTTTAAAATCCGCACGTCCCCTGCACGATCGTTGCAGAGATTCGAAACTACCGGGTATC 84590 | ||| || || | || || ||||| || || || || | | |||||| || ||| Sbjct 1753 ACTTTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATC 1694 Query 84591 ACTTTGAGAGCATCGTTTATTCCATTACCGCCGCAAATGGGTATGAAACCGTACAACAAG 84650 | || ||| ||||| || || | || ||||| || || ||||| |||||||||||| Sbjct 1693 TCCTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAG 1634 Query 84651 TGTGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAATTGCGCCCGTACACTCCCCAT 84710 || | | ||| || | || || ||| ||||| || || | | |||||||||||| Sbjct 1633 TGAGTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACTTCCTCGGATACACTCCCCAT 1574 Query 84711 TCAACAAAATACGC 84724 || || || || || Sbjct 1573 TCTACGAAGTAAGC 1560 >seq15021 Length=1916 Score = 98.7 bits (108), Expect = 7e-16 Identities = 164/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| ||||| | ||||| ||||||| || ||||| ||| | || ||| || | Sbjct 727 AATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGGCTTC 786 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || | || || ||| |||||||||||| | ||| | || Sbjct 787 CGACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCTCCTGATCA 846 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||| || | ||||||||||| |||||| | ||||| || | | |||||||| Sbjct 847 ACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCTGATTACAA 906 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAATA 22069 ||||||||| |||||||||||||| |||| ||| | | ||||||| |||| || Sbjct 907 TATTCAGAAAGAATCTACTCTTCACTTGGTGTTAAGGCTCAGAGGAGGTAATTATTA 963 >seq67196 Length=1848 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| ||||||| | || |||||||| ||||| | ||| || | | Sbjct 694 ATGCAGATCTTTGTTAAAACCCTTACTGGCAAAACTATTACACTTGAAGTTGAGCCATCG 635 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | ||||| |||||| ||||| || || | || | |||| Sbjct 634 GACACAATTGAAAACGTTAAGGCTAAAATTCAAGATAAGGAAGGGATCCCCCCAGACCAG 575 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | || ||||||||||||||||| |||||| || | | || |||||| Sbjct 574 CAGAGAATGATTTTTGCTGGCAAACAACTTGAAGATGGGCGTACCCTATCTGACTACAAT 515 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||| ||||||||| | ||| | ||| | ||| | || || || Sbjct 514 ATTCAGAAAGAATCTACTTTGCATCTAGTACTGCGTCTGCGTGGTGG 468 >seq193007 Length=659 Score = 87.8 bits (96), Expect = 1e-12 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || ||| | || |||||||| || || | ||| ||| | | Sbjct 630 ATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATCG 571 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| || ||||| ||| | || | ||||| Sbjct 570 GACACTATTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAA 511 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTA--AAAACTATGGCCGATTACA 22011 ||| | |||||||||||||| |||||||| |||||| | | ||||| |||| |||| Sbjct 510 CAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTAT--CCGACTACA 453 Query 22012 ATATTCAGAAGGAATCTAC 22030 |||| ||||| |||||||| Sbjct 452 ATATCCAGAAAGAATCTAC 434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357046457465302