Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq29584 120 8e-24 seq36466 84.2 5e-13 >seq29584 Length=4744 Score = 120 bits (132), Expect = 8e-24 Identities = 137/184 (74%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 3344 GAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGG 3403 |||| ||||| | | | || ||| || || |||||||||||||||||||| || || Sbjct 2354 GAGTGTTTCCCAAAGTGACGAAATGCACCTTCCACAAATACGGTCCTTCGGGAACCGTGC 2413 Query 3404 AAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTT 3463 |||| | || || || ||| | || ||| |||| | |||||||||||||||||| | | Sbjct 2414 AAAAGTTTGACGGGCTGTGCGTGCTGCCGCTGAACATCGTCAACGAGAAGATCTACGTGT 2473 Query 3464 TCCTCTGGTTCTGGTTCTACGTGCTAGCCATCATCAGCGGTATCGTTGTTCTGTACCGCA 3523 |||| |||||||||||| | | | | ||| | ||||||||| | | |||||||| | Sbjct 2474 TCCTGTGGTTCTGGTTCGTCATTTTGTCGATCCTGAGCGGTATCTCTCTGCTGTACCGGA 2533 Query 3524 TTGC 3527 | || Sbjct 2534 TGGC 2537 >seq36466 Length=3186 Score = 84.2 bits (92), Expect = 5e-13 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 3410 ACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCT 3469 |||| | |||||||| || ||| |||||| |||||||||||||||||| | ||||||| Sbjct 291 ACGACGCGCTCTGCATTCTGCCGCTGAACGTCGTCAACGAGAAGATCTACGTCTTCCTCT 350 Query 3470 GGTTCTGGTTC 3480 ||||||||||| Sbjct 351 GGTTCTGGTTC 361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12446275900500