Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_008966.1 Length=3638 Score E Sequences producing significant alignments: (Bits) Value seq237889 372 7e-100 seq237888 284 3e-73 seq237887 199 9e-48 >seq237889 Length=1601 Score = 372 bits (412), Expect = 7e-100 Identities = 336/416 (81%), Gaps = 6/416 (1%) Strand=Plus/Plus Query 436 CACAGAGACCCCTGCAACGTTAAGTAATGCGGTATATGTCCTAGCCAGATTGCAGAATCT 495 ||||||||| ||| ||||| |||||| ||| || |||| | ||||||| |||||| Sbjct 1032 CACAGAGACGACTGTCACGTTTTGTAATGTGGTGTAGTCCCTATC-AGATTGCCGAATCT 1090 Query 496 AACAGATTACAGACATTACGGTATGAGCATAAAAAATCTAACGGTCAGCATCCATCAGTA 555 || |||||||| ||| |||||| | |||||| ||||||||||||||||| ||||||| | Sbjct 1091 AATGGATTACAGCCATAACGGTACGTGCATAAGAAATCTAACGGTCAGCACCCATCAGCA 1150 Query 556 CCGAACCAAAGTAAGCATTGAAATAAACAGAGGAAAGAGTCGAGCCGAGCA-GGTAGGTA 614 | |||||| | ||| || | | ||||| ||| | | |||||| || |||| || Sbjct 1151 GCCAACCAATGAAAGAATAAACA-AAACATTAAAAA-ACCCAAGCCGAACAAGGTAATTA 1208 Query 615 TGCCCCGCCACCTTCATGTCCATAGTAGAAAAGAGTTGAGGAGATAAGGCTCTTTGTTTA 674 | ||||| ||| ||||| ||||||||||||||||| |||||||||||| |||||||||| Sbjct 1209 TTCCCCGACACGTTCATTACCATAGTAGAAAAGAGTGGAGGAGATAAGGTTCTTTGTTTA 1268 Query 675 CTCTAACAAATCTACTCTGCCTCAAGTCTAGCCTGCAGCAACCAGACCCTGTGTGAACGC 734 || | |||||||||||||||||||||| || | ||||| ||||||| |||| ||||| Sbjct 1269 CTTCAGCAAATCTACTCTGCCTCAAGTCACGCTGGTAGCAATCAGACCCAGTGTCAACGC 1328 Query 735 TAAATGGCTGCCGTGAAGTGTCTCATATGCCAGTATCTTTAGCATACTGCAGGTTCTTGC 794 |||||||| ||| || | |||| ||||||||| |||||||||| ||||||||| |||||| Sbjct 1329 TAAATGGCCGCCATGCAATGTCCCATATGCCATTATCTTTAGCGTACTGCAGGGTCTTGC 1388 Query 795 AAATTGCAGCTTGAGGCTGCAAGCGAAGTATC--ACTGTTCAGAGCCTACGAAGAT 848 |||||||||||| || ||||||| ||| || | |||||| ||||||||||||| Sbjct 1389 GAATTGCAGCTTGTGGTTGCAAGCTGAGTGTCAGAGTGTTCACAGCCTACGAAGAT 1444 Score = 352 bits (390), Expect = 7e-94 Identities = 326/411 (79%), Gaps = 4/411 (1%) Strand=Plus/Plus Query 2945 AAAAAAGCAAAGATTATCATTTATCCATTTATTGATCTTCAAAACCCACAGTAGTAGGCA 3004 || ||| || ||||||||||||||||||||| ||||||| ||| | ||||||| |||||| Sbjct 37 AATAAAACAGAGATTATCATTTATCCATTTAGTGATCTTTAAAGCTCACAGTAATAGGCA 96 Query 3005 AGTATACTAATATGTTAGACGCAGCTAACAAAACCTGACGCTATCCTTTCACAAGGCACA 3064 | ||||||||||||||||| || ||| ||||||||| || |||||| ||| ||| ||| Sbjct 97 AATATACTAATATGTTAGAAGCTGCTGGCAAAACCTGCCGGTATCCTATCATCAGGTACA 156 Query 3065 ATGAAACTTTTATGAACCTTAAGTCAAAATTTCAGAGAAAACACTGGAAATAAATCAATG 3124 | || |||||||| ||| || | |||| | | ||| ||||||| |||||||| | Sbjct 157 ACGAGACTTTTATACACCATACGAAAAAAACT-ATAGAGAACACTGAGGATAAATCACTT 215 Query 3125 GTCGATTGGGATGGTGGAAGAAGCCCAACCGTCATTATTTGAAGTACGCTCTCGCGACTG 3184 ||||||| |||| ||| | ||| || | || | ||||| ||||||||||||||| Sbjct 216 GTCGATTTGGATAGTGACAAAAGTTCAT---TTATCTTCTGAAGAACGCTCTCGCGACTG 272 Query 3185 CAATCGCGATAGCTGCCACCGCCGCTCCTTGAGCCCAATGTGCTCCTCTTCGAGCTTCAG 3244 || || | |||| ||||||| || |||||||||| | |||||||||||||||||| | Sbjct 273 CAGCAGCAACAGCTATCACCGCCCCTGCTTGAGCCCATTCTGCTCCTCTTCGAGCTTCGG 332 Query 3245 TGGCATGTCGCTTGGCTGCTTCGAATTGTTCAGCAGCTCTTTCTTCCCGCTTGCGACATT 3304 ||||||||||| ||||||||||| |||||| |||| |||||||||| |||| ||| Sbjct 333 CGGCATGTCGCTGGGCTGCTTCGAGTTGTTCCTTAGCTTTTTCTTCCCGTCTGCGGCATG 392 Query 3305 CAGCCGCATGTTCCTGCGCTTTTTCTTCTTGTCGGCGAAGCTCATCGCGCC 3355 | ||||||| ||| ||| || ||||||||||||||||||| ||| |||| Sbjct 393 CCGCCGCATATTCTTGCACTAGTTCTTCTTGTCGGCGAAGCGCATATCGCC 443 Score = 334 bits (370), Expect = 2e-88 Identities = 346/447 (77%), Gaps = 12/447 (3%) Strand=Plus/Plus Query 2350 ATCACTTCCACATCAGTGGCCTGCATCACTTGTCATAGCGACCCCTGCAACGTTTTTGTA 2409 |||| || |||||||||| ||||||||||| || || ||| ||| ||||||| ||| Sbjct 999 ATCAGTTGCACATCAGTGACCTGCATCACTCAGCACAGAGACGACTGTCACGTTTT-GTA 1057 Query 2410 ATGTGGTAAACGTCCTACCGGATTGCGGAATCTCATAGATTACAGACATAACGGTATGTG 2469 ||||||| | |||| | |||||| |||||| || |||||||| |||||||||| ||| Sbjct 1058 ATGTGGTGTAGTCCCTATCAGATTGCCGAATCTAATGGATTACAGCCATAACGGTACGTG 1117 Query 2470 CATA-GAAATCTAACGGTCGGCAGCCATCAGTACCGAAGCATCG---GAATAAACA---- 2521 |||| |||||||||||||| ||| ||||||| | | || || | ||||||||| Sbjct 1118 CATAAGAAATCTAACGGTCAGCACCCATCAGCAGCCAACCAATGAAAGAATAAACAAAAC 1177 Query 2522 -TTGGATGACTCAAGCCAAACAAG-TAGTTCTGCCCCGCCTC-TCCCTCTCCTTAGTAGA 2578 || | || |||||| |||||| || || | ||||| | | | | | || ||||||| Sbjct 1178 ATTAAAAAACCCAAGCCGAACAAGGTAATTATTCCCCGACACGTTCATTACCATAGTAGA 1237 Query 2579 AAAAAGTGGAGGGGATAAGGCTCTTTGTTCTCTTTAGCAAATCTACACTGCTGTAAGTCT 2638 ||| |||||||| ||||||| |||||||| ||| ||||||||||| |||| ||||| Sbjct 1238 AAAGAGTGGAGGAGATAAGGTTCTTTGTTTACTTCAGCAAATCTACTCTGCCTCAAGTCA 1297 Query 2639 AGCCTGTAGCAACCAGACCCTGTGTTAACGTTGAATGGCTGCCGTGCAGCATCACATATG 2698 || ||||||| ||||||| |||| |||| | |||||| ||| |||| || |||||| Sbjct 1298 CGCTGGTAGCAATCAGACCCAGTGTCAACGCTAAATGGCCGCCATGCAATGTCCCATATG 1357 Query 2699 CCAGTATCTTAAGCATACTGGAGGGTCTTGCAAATTGCAGCTTAAGGCTCCGAGCGACGT 2758 ||| |||||| ||| ||||| |||||||||| ||||||||||| || | | ||| || Sbjct 1358 CCATTATCTTTAGCGTACTGCAGGGTCTTGCGAATTGCAGCTTGTGGTTGCAAGCTGAGT 1417 Query 2759 GTCAGAGTGTACAGAGCCTACGGAGAT 2785 |||||||||| || |||||||| |||| Sbjct 1418 GTCAGAGTGTTCACAGCCTACGAAGAT 1444 Score = 188 bits (208), Expect = 2e-44 Identities = 293/417 (70%), Gaps = 34/417 (8%) Strand=Plus/Plus Query 1004 aaaaaaaaCAAAGATTATTATTTATGCATTTATTGATCTTCAAAACTGATGGTAGCAGGC 1063 ||| |||||| ||||||| |||||| |||||| ||||||| ||| || | ||| |||| Sbjct 36 AAATAAAACAGAGATTATCATTTATCCATTTAGTGATCTTTAAAGCTCACAGTAATAGGC 95 Query 1064 GAGTATGCTATTATGTTGGACGCAGCCAACGAAACCTGGCGCTATCCTATCATATC--AC 1121 | ||| ||| |||||| || || || | ||||||| || ||||||||||| || Sbjct 96 AAATATACTAATATGTTAGAAGCTGCTGGCAAAACCTGCCGGTATCCTATCATCAGGTAC 155 Query 1122 AATGAGATACTGTTA-----------ACAAAAATGAGAGAGAACAGTAAGAATAAAGTAC 1170 || |||| || ||| | ||||| | |||||||| | || ||||| || Sbjct 156 AACGAGA--CTTTTATACACCATACGAAAAAAACTATAGAGAACACTGAGGATAAATCAC 213 Query 1171 TTGTGTGACTTGGT--GGAACAAACGCAACACTCACTTCCTGAA---CGCTCTCGAGGCT 1225 |||| || |||| | ||||| | || | | | ||||| |||||||| | || Sbjct 214 TTGTC-GATTTGGATAGTGACAAAAGTT-CATTTATCTTCTGAAGAACGCTCTCGCGACT 271 Query 1226 CCGGCCGCCATGGCGGCCGCAGCAGATATCAACGCCGCATTTCGAGCCTTGTCTGCTTCT 1285 || || ||| ||| ||||| |||| | | ||||| |||||| || Sbjct 272 ------------GCAGCAGCAACAGCTATCACCGCCCCTGCTTGAGCCCATTCTGCTCCT 319 Query 1286 CTTTGAGCGTTCGCGGCCTGTTGCCTGGCTGCCTCAGCTTGTTCCTTAGCTTTTTCTTCC 1345 ||| |||| | ||||| ||| || |||||| || |||||||||||||||||||||| Sbjct 320 CTTCGAGCTTCGGCGGCATGTCGCTGGGCTGCTTCGAGTTGTTCCTTAGCTTTTTCTTCC 379 Query 1346 CGTCTGCGGCATTCGGCAGTATATTCCCGCACTCGTTGTTCTTGGCGGCGAAGCTCA 1402 |||||||||||| | || | |||||| ||||| ||| |||||| ||||||||| || Sbjct 380 CGTCTGCGGCATGCCGCCGCATATTCTTGCACTAGTTCTTCTTGTCGGCGAAGCGCA 436 Score = 165 bits (182), Expect = 2e-37 Identities = 189/251 (75%), Gaps = 6/251 (2%) Strand=Plus/Plus Query 24 GTGGGGGAATTAGAAACTAAATGACTCGTCCGTTACAACAAGCAACCGCTTATTGCGTCA 83 || |||||||| | ||||||| || | || ||||||| | | |||||||||||||| Sbjct 759 GTAGGGGAATTTCTACCTAAATGCGTCATGCGATACAACACGAAGTCGCTTATTGCGTCA 818 Query 84 TCCACGCTCAACACGCACAAACATTCTGGTTCATTTAGATAACCTTTATCCTGTTCGTTC 143 || | || | | |||||| | |||| ||||||||| | |||||| |||| Sbjct 819 TCATTTCGCA----GTATTAACATTAGAGGGCATTCAGATAACCTCTTTCCTGTATGTTC 874 Query 144 TTATTTACGTCAAAGAATAAAACCAAAATCGATAAGCGCACAACAGTAACAATCGACATA 203 | || | |||| | |||| || | ||||| || |||| |||||||| |||||||||| Sbjct 875 CTGTTCATTTCAATGGGTAAACCCGAGATCGAGAACCGCAAAACAGTAATAATCGACATA 934 Query 204 ACCAAGCAAAATAGTTGCCTCGTGGTATAAGATTGTCAGAACGACAGGATACCCAACCG- 262 | |||| |||||||||||| |||||||||||| |||||||||||||||||| || || Sbjct 935 ATTAAGCGAAATAGTTGCCTATTGGTATAAGATTTTCAGAACGACAGGATACCTAAACGC 994 Query 263 TTTCA-CAGTT 272 |||| ||||| Sbjct 995 CTTCATCAGTT 1005 >seq237888 Length=450 Score = 284 bits (314), Expect = 3e-73 Identities = 298/391 (76%), Gaps = 23/391 (6%) Strand=Plus/Plus Query 2398 AACGTTTTTGTAATGTGGTAAACGTCCTACCGGATTGCGGAATCTCATAGATTACAGACA 2457 || |||||||||||| | || | || || | |||||| || ||| |||| | ||||||| Sbjct 67 AAGGTTTTTGTAATGCGATATATTTCTTATCAGATTGCCGATTCTAATAGGTCACAGACA 126 Query 2458 TAACGGTATGTGCATA--GAAATCTAACGGTCGGCAGCCATCAGTACC---------GAA 2506 |||||||||||||||| | ||||||||||| || ||| | |||| || Sbjct 127 TAACGGTATGTGCATAACAAGATCTAACGGTCACCATGCATAAATACCTAACGAAAGGAG 186 Query 2507 GCATCGGAATAAACATTGGATGACTCAAGCCAAACAAGTAGTTCTGCCCCGCCTCTC-CC 2565 ||||| |||||||||| |||||||| | ||||||||| | ||||||||| | | || Sbjct 187 GCATCAATATAAACATTGAATGACTCAGCCTGAACAAGTAGATATGCCCCGCCACCCTCC 246 Query 2566 TCTCCTTAGTAGAAAAAAGTGGAGGGGATAAGGCTCTTTGTTCTCTTTAGCAAATCTACA 2625 ||||||||| |||||| |||||||||||| || ||| | ||||||||| Sbjct 247 TCTCCTTAGAAGAAAATAGTGGAGGGGAT---GC--------AGCTTCAACAAATCTACT 295 Query 2626 CTGCTGTAAGTCTAGCCTGTAGCAACCAGACCCTGTGTTAACGTTGAATGGCTGCCGTGC 2685 |||| | |||||||||||||||||| ||||||||||| ||||| ||||||||||||||| Sbjct 296 TTGCTATTAGTCTAGCCTGTAGCAACTAGACCCTGTGTGAACGTGGAATGGCTGCCGTGC 355 Query 2686 AGCATCACATATGCCAGTATCTTAAGCATACTGGAGGGTCTTGCAAATTGCAGCTTAAGG 2745 || ||| ||||| |||||||| ||||||| ||||||||| || ||||||| | || Sbjct 356 AGTATCTAATATGGTAGTATCTTTGACATACTGCAGGGTCTTGGCAACTGCAGCTCATGG 415 Query 2746 CTCCGAGCGACGTGTCAGAGTGTACAGAGCC 2776 || | ||| ||||||||| || |||||| Sbjct 416 CTGCAAGCAGAGTGTCAGAGCGTTAAGAGCC 446 Score = 273 bits (302), Expect = 5e-70 Identities = 287/371 (77%), Gaps = 16/371 (4%) Strand=Plus/Plus Query 459 GTAATGCGGTATATGTCCTAGCCAGATTGCAGAATCTAACAGATTACAGACATTACGGTA 518 |||||||| ||||| || || | ||||||| || ||||| || | |||||||| |||||| Sbjct 76 GTAATGCGATATATTTCTTATC-AGATTGCCGATTCTAATAGGTCACAGACATAACGGTA 134 Query 519 TGAGCATAAAAA-ATCTAACGGTCAGCATCCATCAGTACCGAACCAAAGTAAGCATTGAA 577 || |||||| || |||||||||||| ||| ||| | |||| ||| |||| | |||| | Sbjct 135 TGTGCATAACAAGATCTAACGGTCACCATGCATAAATACCTAACGAAAGGAGGCATCAAT 194 Query 578 ATAAACAGAGGAAAGAGTCGAGCC-GAGCAGGTAGGTATGCCCCGCCACCTTCATGTCCA 636 ||||||| | || || || |||| || || |||| |||||||||||||| || | ||| Sbjct 195 ATAAACATTG-AATGACTC-AGCCTGAACAAGTAGATATGCCCCGCCACCCTCCTCTCCT 252 Query 637 TAGTAGAAAAGAGTTGAGGAGATAAGGCTCTTTGTTTACTCTAACAAATCTACTCTGCCT 696 ||| |||||| ||| |||| ||| ||| || |||||||||||| ||| Sbjct 253 TAGAAGAAAATAGTGGAGGGGATGCAGCT----------TC-AACAAATCTACTTTGCTA 301 Query 697 CAAGTCTAGCCTGCAGCAACCAGACCCTGTGTGAACGCTAAATGGCTGCCGTGAAGTGTC 756 ||||||||||| |||||| |||||||||||||||| ||||||||||||| ||| || Sbjct 302 TTAGTCTAGCCTGTAGCAACTAGACCCTGTGTGAACGTGGAATGGCTGCCGTGCAGTATC 361 Query 757 TCATATGCCAGTATCTTTAGCATACTGCAGGTTCTTGCAAATTGCAGCTTGAGGCTGCAA 816 | ||||| ||||||||| ||||||||||| ||||| || ||||||| |||||||| Sbjct 362 TAATATGGTAGTATCTTTGACATACTGCAGGGTCTTGGCAACTGCAGCTCATGGCTGCAA 421 Query 817 GCGAAGTATCA 827 || ||| ||| Sbjct 422 GCAGAGTGTCA 432 >seq237887 Length=570 Score = 199 bits (220), Expect = 9e-48 Identities = 164/199 (82%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 1918 TATACCTCACACCTGCACTCAGAAATCTC--GAGTCCCTGATTCTACAAAGCTGTGAATG 1975 |||| |||| ||||||||||| |||||| | ||||||| |||||||||| ||| |||| Sbjct 289 TATATCTCATACCTGCACTCAAAAATCTTCTGTGTCCCTGCTTCTACAAAGTTGTAAATG 348 Query 1976 AATCAGCCATGTTACTTCCTGTACCAGAATTATAGCAGAGCGAACCGTCCGCTGTGAATC 2035 ||||||||||||||||| ||||||||||| ||||||||| ||||||| | ||||||| Sbjct 349 CATCAGCCATGTTACTTCTTGTACCAGAATCATAGCAGAGGCAACCGTCTGATGTGAATT 408 Query 2036 GCATTTGTGTAGCCTAGGATCTCTATGTTAAGCTAACTTACCGCATATTACATGAAATCG 2095 |||||| || |||||| |||| | |||||| ||||||| || ||| || || | |||| Sbjct 409 GCATTTTTGGAGCCTAAGATCAATGTGTTAAACTAACTTCCCACATGTTGCACGGAATCA 468 Query 2096 ATACAAACCAACGGAACTG 2114 | ||||| |||||||||| Sbjct 469 ACTCAAACTAACGGAACTG 487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 11498444120385