Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_008968.1 Length=3868 Score E Sequences producing significant alignments: (Bits) Value seq237889 250 6e-63 seq237888 78.8 2e-11 >seq237889 Length=1601 Score = 250 bits (276), Expect = 6e-63 Identities = 308/419 (74%), Gaps = 19/419 (5%) Strand=Plus/Plus Query 3149 CTATCAGTAGGGTTAGAGTAAGAAA--ATGCAGAGATTATCATTTATCCATTTATTGATC 3206 || ||| |||| |||||||| ||| | |||||||||||||||||||||||| ||||| Sbjct 16 CTTTCATTAGG--TAGAGTAAAAAATAAAACAGAGATTATCATTTATCCATTTAGTGATC 73 Query 3207 TTTAAAACTGACAGTAGTAGGCGAGTATGTTGATATGTTAGGCGCAGCTAACAGAACCTG 3266 |||||| || |||||| ||||| | ||| | ||||||||| || ||| || |||||| Sbjct 74 TTTAAAGCTCACAGTAATAGGCAAATATACTAATATGTTAGAAGCTGCTGGCAAAACCTG 133 Query 3267 GCCCTATCCTAGCACATGGAACAATGACACTTTTATACACTGTAAGATA------AGAGG 3320 | ||||||| || || |||| || |||||||||||| || || | | || Sbjct 134 CCGGTATCCTATCATCAGGTACAACGAGACTTTTATACACCATACGAAAAAAACTATAGA 193 Query 3321 GAATTC------TAATTCCCTTATTGATTGCGATGGTGGAAGAAGTCCAACACTTATTTT 3374 ||| | ||| || ||| | |||| ||| ||| | |||| || |||| || Sbjct 194 GAACACTGAGGATAAATCACTTGTCGATTTGGATAGTGACAAAAGT---TCATTTATCTT 250 Query 3375 CTGAACCACGCTCTCGCGGCTGCGGCCGCGACAGCTACCCCCGCCGCGTTTCGAGCCCGA 3434 ||||| ||||||||||| |||| || || ||||||| | ||||| | | |||||| Sbjct 251 CTGAAGAACGCTCTCGCGACTGCAGCAGCAACAGCTATCACCGCCCCTGCTTGAGCCCAT 310 Query 3435 TCTGCTTGCTTTCGAGATTCCTCGGCCGCTCGCTGGGCTGCCTCGGCTAGTGCCTTAGCT 3494 |||||| |||||| ||| |||| |||||||||||| ||| | || |||||||| Sbjct 311 TCTGCTCCTCTTCGAGCTTCGGCGGCATGTCGCTGGGCTGCTTCGAGTTGTTCCTTAGCT 370 Query 3495 CTTTCTTCCCGTTGGCGACATTCGGCCGCATATTTCTGCACTTTTTCTTCTTGTCGACG 3553 ||||||||||| ||| ||| | |||||||||| |||||| |||||||||||| || Sbjct 371 TTTTCTTCCCGTCTGCGGCATGCCGCCGCATATTCTTGCACTAGTTCTTCTTGTCGGCG 429 >seq237888 Length=450 Score = 78.8 bits (86), Expect = 2e-11 Identities = 126/180 (70%), Gaps = 12/180 (7%) Strand=Plus/Plus Query 1332 TGCATCAGTACCGAACCAATGAATGCGTCAAGGTAAACATTAGATACTTGAGCCA-ATCA 1390 ||||| | |||| ||| || | | || |||| |||||||| || | |||| | || Sbjct 163 TGCATAAATACCTAACGAAAGGAGGCATCAATATAAACATTGAATGACTCAGCCTGAACA 222 Query 1391 GGTGGTTACGCCCCGCCCCTCTTCCTTTCCTTATCAGCGTGGAGTGGAGGGGATAAAGCA 1450 || | || |||||||| | || ||| |||||| || |||||||||||| ||| Sbjct 223 AGTAGATATGCCCCGCCACCCT-CCTCTCCTTAGAAGAAAATAGTGGAGGGGATGCAGC- 280 Query 1451 TTTGTTTACTTTAACAAATCTACACTGTTTTAAGTCTAGCGTGTAGCAACCAGACCCTGT 1510 || ||||||||||| || | | |||||||| ||||||||| ||||||||| Sbjct 281 ---------TTCAACAAATCTACTTTGCTATTAGTCTAGCCTGTAGCAACTAGACCCTGT 331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12232455263235