Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_008968.1
Length=3868
Score E
Sequences producing significant alignments: (Bits) Value
seq237889 250 6e-63
seq237888 78.8 2e-11
>seq237889
Length=1601
Score = 250 bits (276), Expect = 6e-63
Identities = 308/419 (74%), Gaps = 19/419 (5%)
Strand=Plus/Plus
Query 3149 CTATCAGTAGGGTTAGAGTAAGAAA--ATGCAGAGATTATCATTTATCCATTTATTGATC 3206
|| ||| |||| |||||||| ||| | |||||||||||||||||||||||| |||||
Sbjct 16 CTTTCATTAGG--TAGAGTAAAAAATAAAACAGAGATTATCATTTATCCATTTAGTGATC 73
Query 3207 TTTAAAACTGACAGTAGTAGGCGAGTATGTTGATATGTTAGGCGCAGCTAACAGAACCTG 3266
|||||| || |||||| ||||| | ||| | ||||||||| || ||| || ||||||
Sbjct 74 TTTAAAGCTCACAGTAATAGGCAAATATACTAATATGTTAGAAGCTGCTGGCAAAACCTG 133
Query 3267 GCCCTATCCTAGCACATGGAACAATGACACTTTTATACACTGTAAGATA------AGAGG 3320
| ||||||| || || |||| || |||||||||||| || || | | ||
Sbjct 134 CCGGTATCCTATCATCAGGTACAACGAGACTTTTATACACCATACGAAAAAAACTATAGA 193
Query 3321 GAATTC------TAATTCCCTTATTGATTGCGATGGTGGAAGAAGTCCAACACTTATTTT 3374
||| | ||| || ||| | |||| ||| ||| | |||| || |||| ||
Sbjct 194 GAACACTGAGGATAAATCACTTGTCGATTTGGATAGTGACAAAAGT---TCATTTATCTT 250
Query 3375 CTGAACCACGCTCTCGCGGCTGCGGCCGCGACAGCTACCCCCGCCGCGTTTCGAGCCCGA 3434
||||| ||||||||||| |||| || || ||||||| | ||||| | | ||||||
Sbjct 251 CTGAAGAACGCTCTCGCGACTGCAGCAGCAACAGCTATCACCGCCCCTGCTTGAGCCCAT 310
Query 3435 TCTGCTTGCTTTCGAGATTCCTCGGCCGCTCGCTGGGCTGCCTCGGCTAGTGCCTTAGCT 3494
|||||| |||||| ||| |||| |||||||||||| ||| | || ||||||||
Sbjct 311 TCTGCTCCTCTTCGAGCTTCGGCGGCATGTCGCTGGGCTGCTTCGAGTTGTTCCTTAGCT 370
Query 3495 CTTTCTTCCCGTTGGCGACATTCGGCCGCATATTTCTGCACTTTTTCTTCTTGTCGACG 3553
||||||||||| ||| ||| | |||||||||| |||||| |||||||||||| ||
Sbjct 371 TTTTCTTCCCGTCTGCGGCATGCCGCCGCATATTCTTGCACTAGTTCTTCTTGTCGGCG 429
>seq237888
Length=450
Score = 78.8 bits (86), Expect = 2e-11
Identities = 126/180 (70%), Gaps = 12/180 (7%)
Strand=Plus/Plus
Query 1332 TGCATCAGTACCGAACCAATGAATGCGTCAAGGTAAACATTAGATACTTGAGCCA-ATCA 1390
||||| | |||| ||| || | | || |||| |||||||| || | |||| | ||
Sbjct 163 TGCATAAATACCTAACGAAAGGAGGCATCAATATAAACATTGAATGACTCAGCCTGAACA 222
Query 1391 GGTGGTTACGCCCCGCCCCTCTTCCTTTCCTTATCAGCGTGGAGTGGAGGGGATAAAGCA 1450
|| | || |||||||| | || ||| |||||| || |||||||||||| |||
Sbjct 223 AGTAGATATGCCCCGCCACCCT-CCTCTCCTTAGAAGAAAATAGTGGAGGGGATGCAGC- 280
Query 1451 TTTGTTTACTTTAACAAATCTACACTGTTTTAAGTCTAGCGTGTAGCAACCAGACCCTGT 1510
|| ||||||||||| || | | |||||||| ||||||||| |||||||||
Sbjct 281 ---------TTCAACAAATCTACTTTGCTATTAGTCTAGCCTGTAGCAACTAGACCCTGT 331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12232455263235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |