Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq131719 181 9e-41 seq67196 131 1e-25 seq193007 129 5e-25 seq15021 104 2e-17 >seq131719 Length=2163 Score = 181 bits (200), Expect = 9e-41 Identities = 339/495 (68%), Gaps = 5/495 (1%) Strand=Plus/Plus Query 20446 GCATATTTTGTAGAATGGGGCGTTTATCCTAGACAATTTCCCGTCGACAAGGTACCCGTT 20505 || || || ||||||||||| || ||||| || | || ||||| ||| || || | Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619 Query 20506 CCCAATTTGTCTCATCTGCTATATGGCTTTGTGCCAATTTGCGGCGGAGATGGTATCAAC 20565 |||||| || |||| || | || || || | || || ||||| || || || |||||| Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679 Query 20566 GACGCGTTAAAGTTGTCCCAGCCGGATAGTTATTTAGCTTTGCAACGTTCGTGCGCGGGC 20625 ||| | ||| | || | |||| || | || ||||| ||| ||| Sbjct 1680 GACAGTCTGAAGGAGATTGAG---GGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGC 1736 Query 20626 CGAGATAATTTTAAAGTTGCCATACACGATCCTTGGGCCGCTCTACAGAAACCACAAAAA 20685 || || | || ||||| |||| || || || ||||||||||| |||||||||||||| Sbjct 1737 CGCGAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAG 1796 Query 20686 GGAGTATCCTCTTGGAACGAACCGTACAAAGGAAACTTTGGTCAGTTGATGGCAACGAAA 20745 || | || || ||||||||||| |||||||||||||| || || ||||| |||| Sbjct 1797 GGCCTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAA 1856 Query 20746 CTGGCGTATCCTCATCTTAAAGTGCTACCTTCGATCGGCGGGTGGACTTTATCCGATCCG 20805 | |||| || | || || | | ||||| ||||||| |||||||| | ||||| Sbjct 1857 CAGGCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCA 1916 Query 20806 TTTTATCATATGCAC-GATCCGATCGTACGCCAAGTTTTCATCGATTCTGTGGAAGAGTT 20864 || | | | | ||| || || || | |||| | | ||| || |||| || Sbjct 1917 TTCT-TTTTCTTCACTGACAAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAAGACTT 1975 Query 20865 TTTGTTGACGTGGAAATTCTTTGACGGCGTTGACATAGACTGGGAGTTTCCGGGAGGCAA 20924 | ||| |||||||||||||||||||| || || || |||||||| || ||||| || Sbjct 1976 CCTCCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAA 2035 Query 20925 AGGTGCGAATCCGAA 20939 ||| || || || || Sbjct 2036 AGGCGCTAACCCCAA 2050 >seq67196 Length=1848 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || |||| | ||| | ||||| || |||||||||||||| |||||||| Sbjct 693 ATACCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCT 752 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || |||||| ||||| | || || ||||| | || |||||||| || || || Sbjct 753 GACAAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGG 812 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||||||||| |||||| ||| | | || | || || | | |||| Sbjct 813 GGGATACCTTCTTTGTCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCG 872 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | |||||| || |||| |||||| || ||||||||||| Sbjct 873 ACTTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCAT 922 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | |||||| | ||| | || ||||||||||| || || || || Sbjct 237 ATACCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCA 296 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||||||| ||||| ||||| |||| ||||| ||||| || || Sbjct 297 GATAGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGC 356 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| || || |||||| ||| | | ||||| |||||| | | || Sbjct 357 GGAATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCA 416 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||| || |||| ||||| ||||| |||||||| Sbjct 417 ACTTCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || |||| ||| | ||||||||||| ||||| ||||| || Sbjct 465 ATACCACCACGCAGACGCAGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCA 524 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||||||||||||||| ||||| | || | | ||| ||||| || Sbjct 525 GATAGGGTACGCCCATCTTCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGG 584 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 || || ||||| || || ||| ||| | ||| | | ||||| ||||| | | || Sbjct 585 GGGATCCCTTCCTTATCTTGAAT-TTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTC 643 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | |||||||| || || ||||| ||||| |||||||| Sbjct 644 AACTTCAAGTGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATCTGCAT 694 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || | ||| | ||||||||||| ||||| ||||| || Sbjct 9 ATACCACCACGGAGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCA 68 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||||||||||||| |||||| | || || | ||| ||||| || Sbjct 69 GATAGGGTGCGCCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGG 128 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || || || |||||| ||||| | |||| ||||| | | || Sbjct 129 GGGATCCCCTCCTTATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCT 188 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||| || |||| ||||| ||||| |||||||| Sbjct 189 ACCTCTAGAGTAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238 >seq193007 Length=659 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | ||| || || | ||||||||||| || || ||||| ||| Sbjct 403 ACCACCACGGAGGCGGAGAACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGA 462 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || || ||||||||||||||| ||||| |||| |||||||||||||| || || Sbjct 463 TAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGG 522 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||||||||| ||| || ||| | | |||| ||||| | | ||| || Sbjct 523 AATACCTTCTTTGTCTTGAATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAAC 582 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | || | |||||||| || || || || ||||| ||||||||| Sbjct 583 TTCTAAAGTGATAGTTTTGCCAGTAAGTGTCTTGACAAAGATCTGCATG 631 >seq15021 Length=1916 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 || |||| || | || || || || || || | ||||||||||| ||||| ||||||| Sbjct 959 AATTACCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAAT 900 Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270 | | || || ||||| | |||||||||||| |||| | || ||||| || | Sbjct 899 CAGAAAGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAG 840 Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330 ||||||| || ||||| || |||||| ||| | | ||| | ||||||| | | Sbjct 839 GAGGAATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCT 780 Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || | ||| | || || || || || |||||||| || |||||||| Sbjct 779 CCACCTCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCAT 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418869341579556