Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq67196 152 1e-31 seq193007 141 2e-28 seq15021 141 2e-28 >seq67196 Length=1848 Score = 152 bits (168), Expect = 1e-31 Identities = 175/234 (75%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| |||| || || ||||| | ||| ||||||||| ||||| || || | Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 | || || |||||||| || || ||||| || || ||||||||||| || |||| Sbjct 756 AAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTG---ATCTGGG 812 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| |||||||| ||||| || || ||||| ||||| || |||| ||| | ||| Sbjct 813 GGGATACCTTCTTTGTCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCG 872 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| | |||||||| || || |||| ||| || ||||| |||||||||||| Sbjct 873 ACTTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATTATG 926 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | | || ||||||| ||| ||||||||||||||||||||| | Sbjct 240 CCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGAT 299 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| || ||||| | |||||||| || ||||||||||| ||||| |||| Sbjct 300 AGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTG---ATCTGGC 356 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || ||||| |||||||| || || ||||| || ||||| || | || | || Sbjct 357 GGAATACCTTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCA 416 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| || || || |||| || || || || |||||||| Sbjct 417 ACTTCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466 >seq193007 Length=659 Score = 141 bits (156), Expect = 2e-28 Identities = 149/195 (76%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| |||||||| ||||||| || |||||||| ||||| | ||||||||| || || Sbjct 439 TTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAA 498 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| ||||||||||| |||||| || |||||||| || || ||||| ||||| || Sbjct 499 GATAAGACGCTGTTG---GTCTGGGGGAATACCTTCTTTGTCTTGAATTTTGGCTTTGAC 555 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| || | ||| ||||| | ||||| || || || || || ||||| Sbjct 556 ATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTTTGCCAGTAAGTGTCTT 615 Query 288459 GACGAATATCTGCAT 288473 ||| || |||||||| Sbjct 616 GACAAAGATCTGCAT 630 >seq15021 Length=1916 Score = 141 bits (156), Expect = 2e-28 Identities = 147/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || ||||| || || | || ||||| |||||||| |||||||| || || || Sbjct 919 TTCTTTCTGAATATTGTAATCAGAAAGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAA 860 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| || |||||| | || || || |||||||| || || || |||||||| || Sbjct 859 GATCAATCGTTGTTGATCAGGAGGAATACCCTCTTTATCTTGAATCTTGGCTTTCACATT 800 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 |||||||| ||| | || || || || ||||| |||||||| || || || || || Sbjct 799 TTCTATAGTGTCGGAAGCCTCCACCTCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTAC 740 Query 288462 GAATATCTGCATT 288474 ||||||||||||| Sbjct 739 GAATATCTGCATT 727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1175920210263714