Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 152 6e-32
seq194283 102 9e-17
seq179140 102 9e-17
seq73244 95.1 1e-14
seq185573 93.3 5e-14
seq125389 91.5 2e-13
seq36867 91.5 2e-13
seq73243 89.7 6e-13
seq195790 84.2 2e-11
seq36871 84.2 2e-11
>seq131719
Length=2163
Score = 152 bits (168), Expect = 6e-32
Identities = 334/497 (67%), Gaps = 10/497 (2%)
Strand=Plus/Plus
Query 94975 GGGGCTTATTTTGTAGAATGGGGCGTGTA--CGATCGTAAGTTTCCCGCGGACAAGGTGC 95032
|| ||||| || ||||||||||| ||||| ||| | ||||| |||| |||| ||||
Sbjct 1557 GGAGCTTACTTCGTAGAATGGGGAGTGTATCCGA--GGAAGTTCCCCGTGGACCGCGTGC 1614
Query 95033 CCATTCCCAATCTGACGCATCTATTGTACGGTTTCATACCCATTTGCGGAGGCGACGGTA 95092
| || ||||||||||| || | |||||||| ||||| || || |||||||||||||| |
Sbjct 1615 CGATCCCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCA 1674
Query 95093 TCAACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCATGTGCCG 95152
||||||||||||| || || | ||| ||| |||| | || || || ||
Sbjct 1675 TCAACGACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCG 1734
Query 95153 GCAGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAACCGCAAA 95212
|| | || || ||||| || ||| || ||| | | ||||| || ||||| ||||
Sbjct 1735 GCCGCGAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAA 1794
Query 95213 AAGGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATGGCTATTC 95272
| || |||| || || ||||||||| || || || ||||| || ||| ||
Sbjct 1795 AGGGCCTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATG---ATGT 1851
Query 95273 GCAAACA---TAATCCTCATTTGAAAATTTTGCCTAGCATCGGTGGTTGGACACTGAGCG 95329
||||| | || | | || ||||||||| | |||| || ||||| || |
Sbjct 1852 TGAAACAGGCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTG 1911
Query 95330 ACCCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGACTCTGTTCGTG 95389
| || |||| ||| ||| | ||| | || || | || || | || || |
Sbjct 1912 ATCCATTCTTTTTCTTCACTGACAAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAAG 1971
Query 95390 AATTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAGTTTCCCGGCG 95449
| ||| | || ||||| || || || || || || ||||| |||||||| || || |
Sbjct 1972 ACTTCCTCCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAG 2031
Query 95450 GAAAGGGTGCCAACCCC 95466
| || || || ||||||
Sbjct 2032 GTAAAGGCGCTAACCCC 2048
>seq194283
Length=5324
Score = 102 bits (112), Expect = 9e-17
Identities = 71/81 (88%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||||| |||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 2210 AAAAATTCACTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2269
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||||||||||
Sbjct 2270 TTACCACTATACTACCGAGGA 2290
>seq179140
Length=1801
Score = 102 bits (112), Expect = 9e-17
Identities = 81/95 (85%), Gaps = 2/95 (2%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| |||||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 1537 AAAAAGTTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1478
Query 57058 TCACCACTATACTACCGAGGA-TTGAATATATAAC 57091
| |||||||||||||||| || ||| | |||||||
Sbjct 1477 TTACCACTATACTACCGAAGACTTGGA-ATATAAC 1444
>seq73244
Length=4644
Score = 95.1 bits (104), Expect = 1e-14
Identities = 70/82 (85%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058
|||| ||||| |||| | |||||||||| ||||||||||||||||||||| |||||
Sbjct 622 AAAAGATTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 563
Query 57059 CACCACTATACTACCGAGGATT 57080
|||||||||||||||| ||||
Sbjct 562 GACCACTATACTACCGAAGATT 541
>seq185573
Length=3752
Score = 93.3 bits (102), Expect = 5e-14
Identities = 69/81 (85%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| ||||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 2119 AAAAAGGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 2178
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||||||| ||
Sbjct 2179 TGACCACTATACTACCGAAGA 2199
>seq125389
Length=1651
Score = 91.5 bits (100), Expect = 2e-13
Identities = 68/80 (85%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058
||||| |||| |||| | |||||||||| ||||||||||||||||||||| |||||
Sbjct 1364 AAAATAATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 1305
Query 57059 CACCACTATACTACCGAGGA 57078
|||||||||||||||| ||
Sbjct 1304 GACCACTATACTACCGAAGA 1285
>seq36867
Length=10933
Score = 91.5 bits (100), Expect = 2e-13
Identities = 73/86 (85%), Gaps = 3/86 (3%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| | ||||| ||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 9780 AAAAAATCTCTCC--GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 9837
Query 57058 TCACCACTATACTACCGAGGA-TTGA 57082
| |||||||||||||||| || ||||
Sbjct 9838 TGACCACTATACTACCGAAGACTTGA 9863
>seq73243
Length=585
Score = 89.7 bits (98), Expect = 6e-13
Identities = 74/89 (83%), Gaps = 1/89 (1%)
Strand=Plus/Minus
Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054
|| ||||| |||| |||| | |||||||||| ||||||||||||||||||||| |
Sbjct 191 ATTAAAAAAGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 132
Query 57055 TACTCACCACTATACTACCGAGGA-TTGA 57082
|||| |||||||||||||||| || ||||
Sbjct 131 TACTGACCACTATACTACCGAAGACTTGA 103
>seq195790
Length=2215
Score = 84.2 bits (92), Expect = 2e-11
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| ||||| |||| |||||| ||| ||||||||||||||||||||| ||||
Sbjct 1752 AAAAAGATTCTCTCCGGCGGAGAATCGATCCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1693
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||||||| ||
Sbjct 1692 TGACCACTATACTACCGAAGA 1672
>seq36871
Length=889
Score = 84.2 bits (92), Expect = 2e-11
Identities = 75/92 (82%), Gaps = 3/92 (3%)
Strand=Plus/Plus
Query 56992 TTTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 57051
|||| ||||| ||||| ||| | |||||||||| |||||||||||||||||||||
Sbjct 511 TTTAAAAAAAAAACTCTCC--GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGG 568
Query 57052 ACATACTCACCACTATACTACCGAGGA-TTGA 57082
||||| ||||||||||||| || || ||||
Sbjct 569 GGATACTGACCACTATACTACTGAAGACTTGA 600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 541535202699920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |