Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq131719 221 1e-52 seq168888 188 7e-43 seq67196 129 6e-25 seq15021 102 8e-17 >seq131719 Length=2163 Score = 221 bits (244), Expect = 1e-52 Identities = 346/490 (71%), Gaps = 4/490 (1%) Strand=Plus/Plus Query 27473 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGTAATTTTGCCGCGGACCGCGTACCGGCG 27532 || ||||| || |||||||| ||||| | || || ||| ||||||||| ||| Sbjct 1560 GCTTACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATC 1619 Query 27533 CCCAACCTGTCACATTTACTATACGGGTTCGTGCCGATATGCGGCGGCGACGGCATCAAC 27592 ||||| ||| | || || | ||||||||| | ||||| ||||| ||||||||||||||| Sbjct 1620 CCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAAC 1679 Query 27593 GACAGCCTTAAAACTATTCCGGGTAGTTTCGAAGCGTTGCAAAAGTCGTGCGCGGGTCGT 27652 ||||| || || ||| ||| |||||| | || | || || ||| || || Sbjct 1680 GACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGC 1739 Query 27653 GAAAACTTTAAAGTGGCCATTCACGATCCGTGGGCTGCATTGCAAAAACCACAAAAAGGC 27712 ||| |||| |||||| ||||||| || || ||||| || | || ||||||||||| ||| Sbjct 1740 GAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGC 1799 Query 27713 GTTTCGGCTTGGACGGAACAATACAAAGGTAATTTTGGACAGTTAATGGCGATAAAGCGT 27772 |||| | |||| |||| |||||||| || || || || | ||| | | || | Sbjct 1800 CTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAG 1859 Query 27773 GCAAACCCGCATTTAAAAATTCTACCGTCCATAGGAGGGTGGACGCTGTCGGATCCATTT 27832 || | || | | || ||| | || ||| | || || ||||| || | |||||||| Sbjct 1860 GCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATTC 1919 Query 27833 TACTTTTTTCAC-GACGCTGGCAAA-CGCGCCACATTCGTCGAATCGGTTCGCGAATTTC 27890 | ||| ||||| ||| | |||| || | | ||||| | || || || || | Sbjct 1920 T-TTTTCTTCACTGAC-AAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAAGACTTCC 1977 Query 27891 TGCAAACTTGGAAATTTTTCGACGGCGTGGACATCGATTGGGAATTTCCTGGCGGTAACG 27950 | || || |||||||| || |||||||| || ||||||||||| || ||||| ||||| | Sbjct 1978 TCCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAAAG 2037 Query 27951 GCGCAAACCC 27960 |||| ||||| Sbjct 2038 GCGCTAACCC 2047 >seq168888 Length=4095 Score = 188 bits (208), Expect = 7e-43 Identities = 1129/1782 (63%), Gaps = 46/1782 (3%) Strand=Plus/Minus Query 153670 ATTTGTCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAATACATGC 153729 |||| || || ||||| || |||| || || || || |||| |||||||||||||| Sbjct 3215 ATTTATCAACTGTAAACTGTATAGCATTAGCAGCTGGCTTTGTTCTCAAATAATACATGC 3156 Query 153730 CGGTTTTCAAACCACGTTTCCAAGTGTGCATGTGCA-CGCTAGTTAATAACGCGAAACTG 153788 ||||||| | ||| |||||||| | | ||| | || | |||||| || || | Sbjct 3155 CGGTTTTAAGACCCATTTTCCAAGCATAAAAGTGAATCGAT-GTTAATTTACCGTAATTT 3097 Query 153789 GGCTGCGCTATAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCC 153848 || | |||| | | |||||| ||||| || || || || || || || | |||||| Sbjct 3096 GGTTCAGCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACCCCTATCGGCA 3037 Query 153849 GCCATGTCAATCA-AGTTTTTACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAAT 153907 ||||| | ||| |||||| || | || ||||| ||||| || || | || | || Sbjct 3036 GCCATTTGAATTGTAGTTTTAACAGA-CACCTCCCAAACAGTCTTATATAGATCTCTTAT 2978 Query 153908 GTCGTCGGGTATGCGATCAATTTTCTGCACACTGCCTCCGGCCGCTATAATGGAATTGCG 153967 || | || || || || || || | || ||| || ||| Sbjct 2977 TTCTTTCGGAATAGCTTCTATATTTTGTATTGACCCATTATTGTGTATTATAAGATTTTT 2918 Query 153968 CATGTGGTCGTCGTACAAATTTAGTCGACATAAATCTTCAACCAAGTGCTGGTTAATTAC 154027 ||||| || || |||||| | | | |||||| | || || || || | || Sbjct 2917 CATGTCTTCATCCCACAAATCTGCTTCAGTTAAATCACGCAATAAATGATGATTTACAAC 2858 Query 154028 TTGAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACGA 154087 ||| || ||||| | ||| || | | || | ||| ||||| || || || || Sbjct 2857 TTGGAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAGGTTCAAATGA 2798 Query 154088 TTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGA 154147 ||| ||||| || | |||||||| || | |||||| |||||| || | || ||||| Sbjct 2797 TTCATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAATAATAAAGA 2738 Query 154148 GTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCCCAATTCCACAAGTTGGT 154207 |||| |||||| || || | ||| | ||||||| | |||| ||||| | || ||| Sbjct 2737 ATTTCTCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTTCCAAAGGTCGGT 2678 Query 154208 AGG----TTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTCGCCGGACTGTCAC 154263 || |||| |||||||||||||||| || | ||| ||| | || || | Sbjct 2677 GGGGGTTTTGC----TCCACATGTCGTATTGTAATATACCTTGACTGGATGGGCTTCCTT 2622 Query 154264 TATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCTTCTAACGCCGCAT 154323 ||| | || ||| | | || ||| | || ||||| ||||||| ||| | | Sbjct 2621 CGTAAGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAGTGCCCCGT 2562 Query 154324 AGTATACGGTTTCGGCAATTTGTTTGTTTAACATT-TTGGCTTTGTCACTTTCGTACGGC 154382 | || | |||||| ||||| ||| |||| || | ||| |||||||| || || Sbjct 2561 AATAAATGGTTTCAAATATTTG-TTGATTAAGTTTCATCGCTGCATCACTTTCATA-TGC 2504 Query 154383 AATCCCAATATACA-AAAAGCATCGGCGAGCCCTTGAATGCCCACTCCAACGGGTCTGTG 154441 ||| | || | | ||| | ||| || |||||||||| || | ||| | || || || Sbjct 2503 AATGCGCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGGCCTATG 2444 Query 154442 TTTTAAATTCGATTCTTTGGCAGCCTCCAGAGGATAATAATTGATATCGATAATTTTATT 154501 | | ||| |||| | | || || | ||||| |||| | ||| || |||||||| Sbjct 2443 CCTCATATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGATTTTATT 2384 Query 154502 TANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCGACAAAATCA-AACACTCCGC 154560 || || ||||| | | | | Sbjct 2383 TAAGTTTTGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATATGTTTTATC 2324 Query 154561 TT--TTAATAAAACGATTTACACACACAGACGCCAAGTTGCAAACGGCAATTTCTTCAGA 154618 || |||| ||| || | | | ||| || || || || || || | ||| |||| Sbjct 2323 TTCATTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTTCGTCAG- 2265 Query 154619 ACT-AC-TGTATTGCACAATTTCTGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTT 154676 || || |||||| || || || | ||| || ||||| ||| || ||||| | ||| Sbjct 2264 -CTGACGTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTAAGTTC 2206 Query 154677 TTCTGATTCGATTTGATGTTGCATGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTCC 154736 || || || ||| |||| || ||||||||||| | || || || || |||||||| Sbjct 2205 TTTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCGTTTCA 2146 Query 154737 ACTTGGGTTTCAATAATTG--TGCGAAACAGACTTCGCGCCTCAACT-TGACAAGTAAAT 154793 ||||||| ||| || || | | | | | | |||| | || | || | || ||| Sbjct 2145 ACTTGGGCTTCGATTATGGCTTTCCATA-AAACTTGGGCGCTGACCTGTTTCA--CAAAA 2089 Query 154794 CGATTTTCGCTCTCATATTGTTCGTACAGTTTTTCAAACTC-TAAACTGTACACGTCCGA 154852 || ||||| | || |||||||| || || ||||| || || | | ||| ||| | Sbjct 2088 CGCTTTTCTTTTTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCAACA-GTCAGC 2030 Query 154853 CAAACCGGGACAGCGGTCGGGACACATCAATGACCACATTTCGTTTTGTTGTACGCGTTT 154912 || || ||||| | |||||||| | ||| ||| |||| || || | ||| Sbjct 2029 TAATCCAGGACAATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCAACTCTTTT 1970 Query 154913 CATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGC 154972 |||||| | |||||| | ||| ||||| || ||||| || || || | ||||| Sbjct 1969 CATAAAAAGATCCGGTATCCATAAAGCATAAAACAACTCTCGAGCTCGTACTTCTTCTTT 1910 Query 154973 GCCCATGTTTCGCTTTAAATTC-AAAAAATCATATATGTCGGCGTGCCACGGCTCTAAAT 155031 ||| || ||| ||| | || | ||| ||| | ||||| || ||||| |||||||||| Sbjct 1909 GCCAGTG-TTCTTTTTGAGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGGCTCTAAAT 1851 Query 155032 ATACGGCCATCGCGCCTTTGCGT---TTTCCTCCTTGATCCACGTGACGCACACAATTAT 155088 | || || | || || |||| ||||| |||||||| || | | | || | Sbjct 1850 ACACTGCAAAAGCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGCTGTGTTGT 1791 Query 155089 TGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGTGCCGTTGGTGCC-ACG-TATCGC 155146 |||| || | | || ||| | | ||| | | || || ||||| || ||| Sbjct 1790 TGTAAACCCTAAGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGCGATAT-AT 1732 Query 155147 GCTGCCGCGAGCACGCGCTTTA-TGAACATTAACGCCCAAACCTCCGCCGTATTTAGATA 155205 | | || ||| | | | | ||||| | || || | || || | ||||||||| Sbjct 1731 GAT-CCTTTAGCTC-TGATACAGTGAACGTGGACTCCGATTCCACCAGCAGATTTAGATA 1674 Query 155206 TTTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCA 155265 | ||||||| | ||||| || || || |||| || ||||| ||||||| | | Sbjct 1673 TAAGCGCACATTGTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCATAG-CT 1615 Query 155266 ACAAG-AAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAATAATGTAGGACTA 155324 ||||| ||||| || || ||||| || | || | | || | || | || || || Sbjct 1614 ACAAGAAAACAAGATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGGGCTG 1555 Query 155325 GCGTGTGT-AAACATTTTGTTGGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTC 155383 |||||||| ||| ||||| | | | || |||||||| | ||||| || || || || Sbjct 1554 GCGTGTGTAAAATATTTTTCAGACAG-CAAATTGTAAGTATTTATGGCAGCATCTATATC 1496 Query 155384 ACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGTTG 155425 ||| || ||||| || | || | ||||||||| || || Sbjct 1495 TTCACCATGGATACCAATAGATACTCTCATCAGCATATGCTG 1454 >seq67196 Length=1848 Score = 129 bits (142), Expect = 6e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | || || || ||||| | || |||||||||||||| |||||||||| Sbjct 695 ACCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGA 754 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || ||||||| | |||||| || ||| |||| || |||||||| || || || Sbjct 755 CAAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGG 814 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 || |||||||| || || | | || ||||| || ||| | ||||| | || | Sbjct 815 GATACCTTCTTTGTCCTG-AATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGA 873 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 |||| | || | || || || ||||||||||| |||||||| |||||| Sbjct 874 CTTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATT 923 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||||| || ||||||||||| || || || || | | |||||| | |||||| Sbjct 258 ACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGTGCGGCCATCTTCA 317 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 ||||| || || ||| | || || || || || || || ||||| ||||| || || || Sbjct 318 AGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACCTTCCTTATCCTG- 376 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | | || ||||| ||| || | || ||| | || ||||||| ||| | || || Sbjct 377 AATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAGAGTGATAGTTTT 436 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||| ||||| || || || ||||| Sbjct 437 ACCAGTCAAGGTTTTAACAAAGATCTGCAT 466 >seq15021 Length=1916 Score = 102 bits (112), Expect = 8e-17 Identities = 153/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || |||||||| ||||| |||||||| | | ||||| ||||||| | || Sbjct 930 TGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTGCGGCCGTCTTCCAATTGT 871 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || ||| | || | || || || || |||||||| || ||||| ||||| || || Sbjct 870 TTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGAATACCCTCTTTATCTTGAATCTTG 811 Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||||| ||| || | || || || ||||| |||| || | |||||| || || Sbjct 810 -GCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACCTCTAGGGTGATGGTCTTCCCCGT 752 Query 64420 CAAAGTTTTTACGAAAATTTGCATTTTAATAATGA 64454 | ||||||||||| || |||||| ||| | ||| Sbjct 751 TAGGGTTTTTACGAATATCTGCATTGTAAAACTGA 717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498101753209720