Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq31303 113 3e-20
seq70856 100 2e-16
seq241933 86.0 5e-12
seq173438 82.4 6e-11
>seq31303
Length=4652
Score = 113 bits (124), Expect = 3e-20
Identities = 98/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525
||||||| ||| ||| | || |||||||| ||||| || || ||||| ||||| ||| |
Sbjct 2365 TGGGTGCGCGACCACCGAGTACACCACAAATACTCGGAAACAACGGCGGACCCCCACGAT 2306
Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585
|| ||| | ||||||| |||||||||||||||||||||||||||| || |||| ||
Sbjct 2305 GCGAACCGTGGGTTCTTCTTCTCGCACGTGGGATGGCTCATGATGAAGAAACACCCGGAA 2246
Query 108586 GT 108587
||
Sbjct 2245 GT 2244
>seq70856
Length=8315
Score = 100 bits (110), Expect = 2e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 108887 TCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGT 108946
|||||||||| |||||||||||||||||||||||||| | ||||||||||| |||||||
Sbjct 6856 TCGGCGAGGGCTGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGGCGGCCGAGT 6797
Query 108947 TGGGGAACGACTTTA 108961
|||| ||| ||| ||
Sbjct 6796 TGGGCAACTACTCTA 6782
>seq241933
Length=4371
Score = 86.0 bits (94), Expect = 5e-12
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 118178 TCCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACT 118237
|||||| | ||||| ||||| || || || || || |||| || |||||||| ||
Sbjct 3189 TCCGTCTCTGCCGGCTCTTCCAGCTTCCTGGTAGTATCCTTCCACAGACTTGGGCATGCT 3248
Query 118238 GTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCGA 118297
||| || ||||| || || ||||| | || || | |||||| ||||||||||| ||||
Sbjct 3249 GTGGTGGATCACGAATCGGACGTCTGCCTTGTCTACGCCCATGCCGAACGCTATAGTCGC 3308
Query 118298 ACATATC 118304
||||||
Sbjct 3309 GCATATC 3315
>seq173438
Length=2202
Score = 82.4 bits (90), Expect = 6e-11
Identities = 94/124 (76%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 108465 GTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAA 108524
||||| ||| || || | || |||||||||||||| || ||| ||||||||| ||| |
Sbjct 968 GTGGGCGCTGGACCATCGAGTGCACCACAAGTACTCGGAGACGGTGGCCGACCCGCACGA 1027
Query 108525 CG-CCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCG 108583
|| | || | |||||||||||| | |||||||| ||||| || ||| | ||||||
Sbjct 1028 CGTGCGAC-GCGGGTTCTGGTTCGCCCACGTGGGCTGGCTGGTGCTGAGCCCACACCCCG 1086
Query 108584 ACGT 108587
|||
Sbjct 1087 CCGT 1090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380623251438072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |