Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq31303 113 3e-20 seq70856 100 2e-16 seq241933 86.0 5e-12 seq173438 82.4 6e-11 >seq31303 Length=4652 Score = 113 bits (124), Expect = 3e-20 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||||||| ||| ||| | || |||||||| ||||| || || ||||| ||||| ||| | Sbjct 2365 TGGGTGCGCGACCACCGAGTACACCACAAATACTCGGAAACAACGGCGGACCCCCACGAT 2306 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585 || ||| | ||||||| |||||||||||||||||||||||||||| || |||| || Sbjct 2305 GCGAACCGTGGGTTCTTCTTCTCGCACGTGGGATGGCTCATGATGAAGAAACACCCGGAA 2246 Query 108586 GT 108587 || Sbjct 2245 GT 2244 >seq70856 Length=8315 Score = 100 bits (110), Expect = 2e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 108887 TCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGT 108946 |||||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||| Sbjct 6856 TCGGCGAGGGCTGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGGCGGCCGAGT 6797 Query 108947 TGGGGAACGACTTTA 108961 |||| ||| ||| || Sbjct 6796 TGGGCAACTACTCTA 6782 >seq241933 Length=4371 Score = 86.0 bits (94), Expect = 5e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 118178 TCCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACT 118237 |||||| | ||||| ||||| || || || || || |||| || |||||||| || Sbjct 3189 TCCGTCTCTGCCGGCTCTTCCAGCTTCCTGGTAGTATCCTTCCACAGACTTGGGCATGCT 3248 Query 118238 GTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCGA 118297 ||| || ||||| || || ||||| | || || | |||||| ||||||||||| |||| Sbjct 3249 GTGGTGGATCACGAATCGGACGTCTGCCTTGTCTACGCCCATGCCGAACGCTATAGTCGC 3308 Query 118298 ACATATC 118304 |||||| Sbjct 3309 GCATATC 3315 >seq173438 Length=2202 Score = 82.4 bits (90), Expect = 6e-11 Identities = 94/124 (76%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 108465 GTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAA 108524 ||||| ||| || || | || |||||||||||||| || ||| ||||||||| ||| | Sbjct 968 GTGGGCGCTGGACCATCGAGTGCACCACAAGTACTCGGAGACGGTGGCCGACCCGCACGA 1027 Query 108525 CG-CCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCG 108583 || | || | |||||||||||| | |||||||| ||||| || ||| | |||||| Sbjct 1028 CGTGCGAC-GCGGGTTCTGGTTCGCCCACGTGGGCTGGCTGGTGCTGAGCCCACACCCCG 1086 Query 108584 ACGT 108587 ||| Sbjct 1087 CCGT 1090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380623251438072