Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 192 6e-44
seq67196 114 1e-20
seq15021 98.7 9e-16
seq193007 91.5 1e-13
seq213873 82.4 7e-11
seq136473 82.4 7e-11
seq6108 82.4 7e-11
>seq131719
Length=2163
Score = 192 bits (212), Expect = 6e-44
Identities = 340/491 (69%), Gaps = 6/491 (1%)
Strand=Plus/Plus
Query 22322 TATTTTGTCGAGTGGGGAGTGTACCTTCGCCAGTTTCCCGCCGACAAGGTGCCCGTGCCG 22381
|| || || || ||||||||||| | | |||| |||| ||| ||||| | ||
Sbjct 1563 TACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATCCCC 1622
Query 22382 AACCTGTCGCATTTGCTCTACGGTTTCGTGCCAATATGCGGCGGAGACGGCATCAACGAC 22441
|| ||| | || ||| | ||||| ||| | || || ||||| || |||||||||||||||
Sbjct 1623 AATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAACGAC 1682
Query 22442 GCCCTGAAAACGGTGCCGGGAAGCTTCGAGGCGTTGCAACGGTCGTGCGTCAATAGAGCC 22501
||||| | | ||| || ||| |||| | || || || ||| | | |
Sbjct 1683 AGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGCGAA 1742
Query 22502 GATTTCAAGGTGACCATACACGATCCGTGGGCGGCCGTACAAAAACCTCAAAAAGGCGTG 22561
|| ||||| ||| |||| || || || ||||| || | || ||||| ||||| ||| |
Sbjct 1743 GACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGCCTT 1802
Query 22562 TCGTCGTGGAACGAACCGTACAAAGGCAACTTTGGTCAATTGATGGCAGTGAAAAGAGCG 22621
|| || ||||||||||| |||||||| ||||| || ||| ||||| ||||| |||
Sbjct 1803 TCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAGGCG 1862
Query 22622 AATCCTCATCTCAAAGTGTTAGCATCGATCGGCGGATGGACGTTGTCCGATCCGTTTTAT 22681
| || | ||||| | || | || ||||||| ||||| ||| | ||||| || | |
Sbjct 1863 AGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATTCT-T 1921
Query 22682 CATATGCAC-GACAAG--AACGTGAGACAAATTTTCATCGATTCGGTGGAAGAGTATTTG 22738
| | ||| |||||| || | | ||| |||| | | ||| || |||| | |
Sbjct 1922 TTTCTTCACTGACAAGACAAAGCGTGAC--CGTTTCGTTGCTTCCGTAAAAGACTTCCTC 1979
Query 22739 ATCACGTGGAAGTTCTTTGACGGCGTCGATATTGATTGGGAGTTTCCCGGCGGCAAGGGG 22798
|| ||||| |||||||||||||||||||| ||||||||||| || || || || ||
Sbjct 1980 CAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAAAGGC 2039
Query 22799 GCGAATCCTAA 22809
|| || || ||
Sbjct 2040 GCTAACCCCAA 2050
>seq67196
Length=1848
Score = 114 bits (126), Expect = 1e-20
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|| ||||| | ||| | || | ||||| || || |||||||||||||||||||| |
Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || || || | ||| |||||||| | |||| ||||||||||| || ||
Sbjct 756 AAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGG 815
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGA 127064
|| || || |||||| ||| | | |||| | ||| |||| || || | | ||||
Sbjct 816 ATACCTTCTTTGTCC-TGAATCTTAGCTTTAACGTT-CTCGATAGTATCTGAAGGTTCGA 873
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| | ||| | |||||| || |||| |||||| || |||||||||||
Sbjct 874 CTTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCAT 922
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | ||||| |||| ||| | || || |||||||| ||||| || ||
Sbjct 240 CCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGAT 299
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || |||||||||||||| |||||| || || ||||| || ||
Sbjct 300 AGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGA 359
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || ||||| ||| ||| | | || |||| | ||| | |||||| | ||| ||
Sbjct 360 ATACCTTCCTTATCC-TGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAAC 418
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | || | ||||| || |||| ||||| ||||| ||||||||
Sbjct 419 TTCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| || | ||| | ||||| ||||| ||||||||||| ||
Sbjct 468 CCACCACGCAGACGCAGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 527
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || || ||||| ||||| | |||| || |||||| || || ||
Sbjct 528 AGGGTACGCCCATCTTCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGG 587
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| || ||||| || ||||| ||| | | ||| | ||||||| ||| |||
Sbjct 588 ATCCCTTCCTTATCTTGAATTTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCAACT 647
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | |||||||| || || ||||| ||||| ||||||||
Sbjct 648 TCAAGTGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATCTGCAT 694
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| || | ||| | ||||| ||||| ||||||||||| ||
Sbjct 12 CCACCACGGAGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 71
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || || ||||| |||||| | |||| || |||||| || || ||
Sbjct 72 AGGGTGCGCCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGG 131
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||| | | ||| | | || || | | || | ||||| | ||| ||
Sbjct 132 ATCCCCTCCTTAT-CTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTAC 190
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||||| || |||| ||||| ||||| ||||||||
Sbjct 191 CTCTAGAGTAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238
>seq15021
Length=1916
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 126902 AACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCG 126961
|||||||| || | ||||| ||||| |||||||||||||| | ||||| ||
Sbjct 939 AACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTGCGGCCGTCT 880
Query 126962 TCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021
|| | ||||| ||||| |||||||||| || ||||| ||||| || ||||| || | |
Sbjct 879 TCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGAATACCCTCTTTAT-C 821
Query 127022 GTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGT 127080
||| | | || || | | ||| | ||||| | | ||| || || | ||| | ||
Sbjct 820 TTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACCTCTAGGGTGATGGT 761
Query 127081 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || || || |||||||| || ||||||||
Sbjct 760 CTTCCCCGTTAGGGTTTTTACGAATATCTGCAT 728
>seq193007
Length=659
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||||| || | ||||| ||||| || |||||||| |||
Sbjct 404 CCACCACGGAGGCGGAGAACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGAT 463
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || || ||||||||||| |||| | ||||| || || || ||
Sbjct 464 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGA 523
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || || |||| | ||| ||| || |||| | || | ||||||| || ||
Sbjct 524 ATACCTTCTTTGT-CTTGAATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAAC 582
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
||| | || | |||||||| || || || || ||||| |||||||||
Sbjct 583 TTCTAAAGTGATAGTTTTGCCAGTAAGTGTCTTGACAAAGATCTGCATG 631
>seq213873
Length=3553
Score = 82.4 bits (90), Expect = 7e-11
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 30904 CTTTCTCGCTCTTGCAAATCCACTGGCGTTCATTCCGTAAGGATTGTAGATTCCGGCAAG 30963
||| |||||||| ||| ||| ||| | ||| |||||| ||||| ||||| |||||| |
Sbjct 3135 CTTGCTCGCTCTCGCACATCGACTACCACTCAATCCGTACGGATTATAGATGCCGGCAGG 3194
Query 30964 AATGAACGTTAGTGGATGGGCCGCTATT 30991
||||| |||||||||||| | ||||||
Sbjct 3195 AATGAGCGTTAGTGGATGACCAGCTATT 3222
>seq136473
Length=2902
Score = 82.4 bits (90), Expect = 7e-11
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 30909 TCGCTCTTGCAAATCCACTGGCGTTCATTCCGTAAGGATTGTAGATTCCGGCAAGAATGA 30968
||||||||||||||| ||| | || |||||| ||||| |||||||||||| ||||||
Sbjct 2880 TCGCTCTTGCAAATCGACTACTGCACAATCCGTACGGATTATAGATTCCGGCAGGAATGA 2821
Query 30969 ACGTTAGTGGATGGGCCGCTATTCT 30993
| |||| ||||||| |||| |||
Sbjct 2820 ATGTTATTGGATGGCTTGCTAATCT 2796
>seq6108
Length=504
Score = 82.4 bits (90), Expect = 7e-11
Identities = 69/83 (83%), Gaps = 4/83 (5%)
Strand=Plus/Plus
Query 30910 CGCTCTTGCAAATCCACT--GGCGTTCATTCCGTAAGGATTGTAGATTCCGGCAAGAATG 30967
|||||||||||||| ||| |||| | ||| || ||||| |||||||||||| |||||
Sbjct 119 CGCTCTTGCAAATCGACTACTGCGT--AATCCATACGGATTATAGATTCCGGCAGGAATG 176
Query 30968 AACGTTAGTGGATGGGCCGCTAT 30990
|| |||||| ||||| |||||||
Sbjct 177 AATGTTAGTAGATGGCCCGCTAT 199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 474032316823120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |