Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq131719 192 6e-44 seq67196 114 1e-20 seq15021 98.7 9e-16 seq193007 91.5 1e-13 seq213873 82.4 7e-11 seq136473 82.4 7e-11 seq6108 82.4 7e-11 >seq131719 Length=2163 Score = 192 bits (212), Expect = 6e-44 Identities = 340/491 (69%), Gaps = 6/491 (1%) Strand=Plus/Plus Query 22322 TATTTTGTCGAGTGGGGAGTGTACCTTCGCCAGTTTCCCGCCGACAAGGTGCCCGTGCCG 22381 || || || || ||||||||||| | | |||| |||| ||| ||||| | || Sbjct 1563 TACTTCGTAGAATGGGGAGTGTATCCGAGGAAGTTCCCCGTGGACCGCGTGCCGATCCCC 1622 Query 22382 AACCTGTCGCATTTGCTCTACGGTTTCGTGCCAATATGCGGCGGAGACGGCATCAACGAC 22441 || ||| | || ||| | ||||| ||| | || || ||||| || ||||||||||||||| Sbjct 1623 AATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCATCAACGAC 1682 Query 22442 GCCCTGAAAACGGTGCCGGGAAGCTTCGAGGCGTTGCAACGGTCGTGCGTCAATAGAGCC 22501 ||||| | | ||| || ||| |||| | || || || ||| | | | Sbjct 1683 AGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCGGCCGCGAA 1742 Query 22502 GATTTCAAGGTGACCATACACGATCCGTGGGCGGCCGTACAAAAACCTCAAAAAGGCGTG 22561 || ||||| ||| |||| || || || ||||| || | || ||||| ||||| ||| | Sbjct 1743 GACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAAAGGGCCTT 1802 Query 22562 TCGTCGTGGAACGAACCGTACAAAGGCAACTTTGGTCAATTGATGGCAGTGAAAAGAGCG 22621 || || ||||||||||| |||||||| ||||| || ||| ||||| ||||| ||| Sbjct 1803 TCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATGATGTTGAAACAGGCG 1862 Query 22622 AATCCTCATCTCAAAGTGTTAGCATCGATCGGCGGATGGACGTTGTCCGATCCGTTTTAT 22681 | || | ||||| | || | || ||||||| ||||| ||| | ||||| || | | Sbjct 1863 AGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACTTTGGCTGATCCATTCT-T 1921 Query 22682 CATATGCAC-GACAAG--AACGTGAGACAAATTTTCATCGATTCGGTGGAAGAGTATTTG 22738 | | ||| |||||| || | | ||| |||| | | ||| || |||| | | Sbjct 1922 TTTCTTCACTGACAAGACAAAGCGTGAC--CGTTTCGTTGCTTCCGTAAAAGACTTCCTC 1979 Query 22739 ATCACGTGGAAGTTCTTTGACGGCGTCGATATTGATTGGGAGTTTCCCGGCGGCAAGGGG 22798 || ||||| |||||||||||||||||||| ||||||||||| || || || || || Sbjct 1980 CAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGAGGTAAAGGC 2039 Query 22799 GCGAATCCTAA 22809 || || || || Sbjct 2040 GCTAACCCCAA 2050 >seq67196 Length=1848 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | ||| | || | ||||| || || |||||||||||||||||||| | Sbjct 696 CCTCCGCGAAGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGAC 755 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || | ||| |||||||| | |||| ||||||||||| || || Sbjct 756 AAAGTACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGG 815 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || || |||||| ||| | | |||| | ||| |||| || || | | |||| Sbjct 816 ATACCTTCTTTGTCC-TGAATCTTAGCTTTAACGTT-CTCGATAGTATCTGAAGGTTCGA 873 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| | ||| | |||||| || |||| |||||| || ||||||||||| Sbjct 874 CTTCCAAGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCAT 922 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||| |||| ||| | || || |||||||| ||||| || || Sbjct 240 CCACCACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGAT 299 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || |||||||||||||| |||||| || || ||||| || || Sbjct 300 AGGGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGA 359 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||| ||| ||| | | || |||| | ||| | |||||| | ||| || Sbjct 360 ATACCTTCCTTATCC-TGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAAC 418 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | ||||| || |||| ||||| ||||| |||||||| Sbjct 419 TTCTAGAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | ||||| ||||| ||||||||||| || Sbjct 468 CCACCACGCAGACGCAGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 527 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || || ||||| ||||| | |||| || |||||| || || || Sbjct 528 AGGGTACGCCCATCTTCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGG 587 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||| || ||||| ||| | | ||| | ||||||| ||| ||| Sbjct 588 ATCCCTTCCTTATCTTGAATTTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCAACT 647 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | |||||||| || || ||||| ||||| |||||||| Sbjct 648 TCAAGTGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATCTGCAT 694 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | ||||| ||||| ||||||||||| || Sbjct 12 CCACCACGGAGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 71 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || || ||||| |||||| | |||| || |||||| || || || Sbjct 72 AGGGTGCGCCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGG 131 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||| | | ||| | | || || | | || | ||||| | ||| || Sbjct 132 ATCCCCTCCTTAT-CTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTAC 190 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || |||| ||||| ||||| |||||||| Sbjct 191 CTCTAGAGTAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238 >seq15021 Length=1916 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 126902 AACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCG 126961 |||||||| || | ||||| ||||| |||||||||||||| | ||||| || Sbjct 939 AACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTGCGGCCGTCT 880 Query 126962 TCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021 || | ||||| ||||| |||||||||| || ||||| ||||| || ||||| || | | Sbjct 879 TCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGAATACCCTCTTTAT-C 821 Query 127022 GTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGT 127080 ||| | | || || | | ||| | ||||| | | ||| || || | ||| | || Sbjct 820 TTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACCTCTAGGGTGATGGT 761 Query 127081 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || |||||||| || |||||||| Sbjct 760 CTTCCCCGTTAGGGTTTTTACGAATATCTGCAT 728 >seq193007 Length=659 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | ||||| ||||| || |||||||| ||| Sbjct 404 CCACCACGGAGGCGGAGAACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGAT 463 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || || ||||||||||| |||| | ||||| || || || || Sbjct 464 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGA 523 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || || |||| | ||| ||| || |||| | || | ||||||| || || Sbjct 524 ATACCTTCTTTGT-CTTGAATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAAC 582 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||| | || | |||||||| || || || || ||||| ||||||||| Sbjct 583 TTCTAAAGTGATAGTTTTGCCAGTAAGTGTCTTGACAAAGATCTGCATG 631 >seq213873 Length=3553 Score = 82.4 bits (90), Expect = 7e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 30904 CTTTCTCGCTCTTGCAAATCCACTGGCGTTCATTCCGTAAGGATTGTAGATTCCGGCAAG 30963 ||| |||||||| ||| ||| ||| | ||| |||||| ||||| ||||| |||||| | Sbjct 3135 CTTGCTCGCTCTCGCACATCGACTACCACTCAATCCGTACGGATTATAGATGCCGGCAGG 3194 Query 30964 AATGAACGTTAGTGGATGGGCCGCTATT 30991 ||||| |||||||||||| | |||||| Sbjct 3195 AATGAGCGTTAGTGGATGACCAGCTATT 3222 >seq136473 Length=2902 Score = 82.4 bits (90), Expect = 7e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 30909 TCGCTCTTGCAAATCCACTGGCGTTCATTCCGTAAGGATTGTAGATTCCGGCAAGAATGA 30968 ||||||||||||||| ||| | || |||||| ||||| |||||||||||| |||||| Sbjct 2880 TCGCTCTTGCAAATCGACTACTGCACAATCCGTACGGATTATAGATTCCGGCAGGAATGA 2821 Query 30969 ACGTTAGTGGATGGGCCGCTATTCT 30993 | |||| ||||||| |||| ||| Sbjct 2820 ATGTTATTGGATGGCTTGCTAATCT 2796 >seq6108 Length=504 Score = 82.4 bits (90), Expect = 7e-11 Identities = 69/83 (83%), Gaps = 4/83 (5%) Strand=Plus/Plus Query 30910 CGCTCTTGCAAATCCACT--GGCGTTCATTCCGTAAGGATTGTAGATTCCGGCAAGAATG 30967 |||||||||||||| ||| |||| | ||| || ||||| |||||||||||| ||||| Sbjct 119 CGCTCTTGCAAATCGACTACTGCGT--AATCCATACGGATTATAGATTCCGGCAGGAATG 176 Query 30968 AACGTTAGTGGATGGGCCGCTAT 30990 || |||||| ||||| ||||||| Sbjct 177 AATGTTAGTAGATGGCCCGCTAT 199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474032316823120