Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 114 1e-20
seq67196 96.9 4e-15
seq131720 91.5 2e-13
seq193007 84.2 2e-11
>seq131719
Length=2163
Score = 114 bits (126), Expect = 1e-20
Identities = 327/497 (66%), Gaps = 12/497 (2%)
Strand=Plus/Plus
Query 98743 GGGGCTTATTTTGTAGAATGGGGTGTTTA--CGATCGCAAATTTCCAGCAGATAAAGTGC 98800
|| ||||| || ||||||||||| || || ||| | || || || | || ||||
Sbjct 1557 GGAGCTTACTTCGTAGAATGGGGAGTGTATCCGA--GGAAGTTCCCCGTGGACCGCGTGC 1614
Query 98801 CTATCCCCAATTTGACACACCTTTTGTATGGTTTTATCCCCATTTGCGGAGGCGACGGTA 98860
| ||||||||| |||| ||| | ||||| || || || || || |||||||||||||| |
Sbjct 1615 CGATCCCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCA 1674
Query 98861 TAAACGACAGTCTAAAACAAGTGCCGGGATCTTTTGAGACGTTACAAAAATCGTGCGATA 98920
| ||||||||||| || | | ||| ||| || | | || || |||
Sbjct 1675 TCAACGACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCG 1734
Query 98921 AGAGAGATGATTTCAAGGTGAGCATCCACGATATTTACGGTGCTCTACAGAAACCACAAC 98980
| || || ||||| ||| ||| || || | | ||||| ||||||||||||
Sbjct 1735 GCCGCGAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAA 1794
Query 98981 AGGGTGTCTCCGATTATAACGAGCCTTACCGTGGCAATTTCGGACAGCTTATGGCCATAC 99040
|||| | || | ||||| |||||| || || ||||| || || ||| ||
Sbjct 1795 AGGGCCTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATG---ATGT 1851
Query 99041 GTAAACA---CAACCCACATCTAAAAATCCTACCCAGTATCGGTGGTTGGACTCTTAGC- 99096
||||| | ||| | || || || | || |||| || |||||| || ||
Sbjct 1852 TGAAACAGGCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACT-TTGGCT 1910
Query 99097 GACCCCTTCTATTTTTTCGCCGATGATTACAAGCGCAAAGTGTTCGTAGACTCGGTTCGT 99156
|| || |||| ||| ||| | || | ||||| | ||||| | || ||
Sbjct 1911 GATCCATTCTTTTTCTTCACTGACAAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAA 1970
Query 99157 GAATTCCTACAGGTGTGGAAATTTTTCGACGGTGTAGACATCGACTGGGAGTTTCCTGGC 99216
|| ||||| ||| |||||||| || ||||| || || ||||| |||||||| |||||
Sbjct 1971 GACTTCCTCCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGA 2030
Query 99217 GGAAAGGGGGCCAACCC 99233
|| || || || |||||
Sbjct 2031 GGTAAAGGCGCTAACCC 2047
>seq67196
Length=1848
Score = 96.9 bits (106), Expect = 4e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| || |||||||| ||| || || || ||||||||||| ||||| |||||| |
Sbjct 23 ACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTGCGCCC 82
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || || || ||||| ||||| |||| | ||||||||| | || | | ||||||
Sbjct 83 ATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGGATCCCCTCCTT 142
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|| ||||| || | || | | ||||| | || || || | || ||
Sbjct 143 ATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTACCTCTAGAGTAAT 202
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| || |||| |||||||||||||| |||||
Sbjct 203 AGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
|||||| |||||||| | || || ||||||||||| ||||| ||||| ||||| |
Sbjct 251 ACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGTGCGGCC 310
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || ||||| || || || || |||| || || || || | ||| | | |||||
Sbjct 311 ATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACCTTCCTT 370
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| ||||| |||| | | | ||||| | || || || | |||||
Sbjct 371 ATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAGAGTGAT 430
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| || |||| |||||||||||||| |||||
Sbjct 431 AGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466
>seq131720
Length=1042
Score = 91.5 bits (100), Expect = 2e-13
Identities = 398/616 (65%), Gaps = 19/616 (3%)
Strand=Plus/Plus
Query 99334 TACGAACTGACAAGTGCCGTGGGCGCCGGTTACGATAAAATCGACGTGGTCGATTACTCT 99393
||||| |||| |||| | | || |||| || || ||| | || |||||||||
Sbjct 80 TACGAGTTGACGTCTGCCATCAGTGCTGGTTGGGACAAGATCCAAGTCGTCGATTACAGC 139
Query 99394 ACAGC-CAGTCAATATTTGGACCATGTGTTTTTAATGAGTTACGATTTTAAAGGCGCCTG 99452
|||| ||| |||| ||||||| | || || ||||| |||||||| || || || ||
Sbjct 140 GCAGCGCAGA-AATACATGGACCACATATTCTTCATGAGCTACGATTTCAAGGGAGCGTG 198
Query 99453 GTCCAACACCGACT-TGGGTCATCAAACACCATTGTATGCACCATCGTGGAACTCCGAAG 99511
|||||| ||| | ||||| || | | |||| || ||||| ||| | ||||||
Sbjct 199 GTCCAATGAT-ACTCTTGGTCACCAGGCTTCTCTGTACGCTCCATCTTGGCAG-CCGAAG 256
Query 99512 -AGAGATACACAACCGATTATGCGGTTAAACAGCTATTAAAGAAAAAAGTGCCTTCTCAC 99570
||| ||||| || |||| | || ||| | | || | || ||| | || |
Sbjct 257 GAGACTTACACGACTGATTTCGGCGTGAAATACTTGTTGGCGCAAGGTGTGAATCCTAAG 316
Query 99571 AAGATTGTAGTGGGAGTCGCCATGTACGGCAGAGGATGGAGTGGAGTGCATGACTACAAA 99630
|||||||| || || || ||||||||||| | || |||| || || || | || ||
Sbjct 317 AAGATTGTGGTTGGTGTTGCCATGTACGGACGTGGCTGGACCGGTGTCCACGGTTATGAA 376
Query 99631 AATAATAACGTTTTTACGGGTGTGGCCACGGGACCGGTAAAAGGCACCTGGGAAAACGGT 99690
| | || ||| || || || ||||| || || ||||| || ||| || | |||
Sbjct 377 GGTGACAATCCTTTCACTGGCAATGCAACGGGTCCTGTTAAAGGTACTTGGCAAGATGGT 436
Query 99691 GTTGTTGATTATAGGCAGGTCGAAGA-GCTCAAAAACAAC----AATTACACATACGCAT 99745
|| || || || || | | | ||| | | | | | | || | ||| |
Sbjct 437 GTGGTGGACTACAGAGAAATAGCAGATGAT--ATAGCTGCTGGGAAATGGGAGTACCATT 494
Query 99746 ACGACAAAGTGGCCGAGGCGGCATATATTTACGGTGGCGCCGACCAGGCGTTGAATTTAA 99805
| || || ||||| | ||| |||| | | | | | | | ||| || | || |||
Sbjct 495 ATGATAAGGTGGCACAAGCGCCATACGTGTTCAG-GAAGGCCACC-GGAG----ATCTAA 548
Query 99806 TTTCTTACGACGACTCATCGTCTGTACTAGCAAAAGGTAATTACGTTTTACAAAACAATC 99865
| | |||||||| | || || ||| ||||| || ||||| | | |||||
Sbjct 549 TAACGTACGACGATGCCAGATCAGTTATAGAGAAAGGCAAATACGTCAGAAATAACAAAT 608
Query 99866 TCGGAGGTTTATTTGCTTGGGAAATCGATGCCGACAACGGTGACTTGTTAAACGCCATGA 99925
| || ||||| || || |||||||| || || ||||| |||||| | || || || ||||
Sbjct 609 TGGGTGGTTTGTTCGCGTGGGAAATTGACGCGGACAATGGTGACATATTGAATGCTATGA 668
Query 99926 ACACAGGTTTGGGTAA 99941
||| ||| | || ||
Sbjct 669 ACATGGGTCTCGGCAA 684
>seq193007
Length=659
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||| ||||||||| || || |||||||||||||||||||| ||||| | || ||
Sbjct 422 ACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTCA 481
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|| || || || || || || | ||||| ||||| | || | | || |||||
Sbjct 482 AGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGA 541
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|| || |||| || | | ||||| | ||| || || | ||||| ||||||
Sbjct 542 ATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTTTG 601
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || |||||||| |||||
Sbjct 602 CCAGTAAGTGTCTTGACAAAGATCTGCAT 630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563492781314760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |