Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq131719 114 1e-20 seq67196 96.9 4e-15 seq131720 91.5 2e-13 seq193007 84.2 2e-11 >seq131719 Length=2163 Score = 114 bits (126), Expect = 1e-20 Identities = 327/497 (66%), Gaps = 12/497 (2%) Strand=Plus/Plus Query 98743 GGGGCTTATTTTGTAGAATGGGGTGTTTA--CGATCGCAAATTTCCAGCAGATAAAGTGC 98800 || ||||| || ||||||||||| || || ||| | || || || | || |||| Sbjct 1557 GGAGCTTACTTCGTAGAATGGGGAGTGTATCCGA--GGAAGTTCCCCGTGGACCGCGTGC 1614 Query 98801 CTATCCCCAATTTGACACACCTTTTGTATGGTTTTATCCCCATTTGCGGAGGCGACGGTA 98860 | ||||||||| |||| ||| | ||||| || || || || || |||||||||||||| | Sbjct 1615 CGATCCCCAATCTGACTCACTTGTTGTACGGGTTCATTCCGATCTGCGGAGGCGACGGCA 1674 Query 98861 TAAACGACAGTCTAAAACAAGTGCCGGGATCTTTTGAGACGTTACAAAAATCGTGCGATA 98920 | ||||||||||| || | | ||| ||| || | | || || ||| Sbjct 1675 TCAACGACAGTCTGAAGGAGATTGAGGGCAGTTTCCAGGCACTCCAGCGTTCCTGCAGCG 1734 Query 98921 AGAGAGATGATTTCAAGGTGAGCATCCACGATATTTACGGTGCTCTACAGAAACCACAAC 98980 | || || ||||| ||| ||| || || | | ||||| |||||||||||| Sbjct 1735 GCCGCGAAGACTTCAAAGTGTCCATTCATGACCCCTGGGCCGCTCTTCAGAAACCACAAA 1794 Query 98981 AGGGTGTCTCCGATTATAACGAGCCTTACCGTGGCAATTTCGGACAGCTTATGGCCATAC 99040 |||| | || | ||||| |||||| || || ||||| || || ||| || Sbjct 1795 AGGGCCTTTCTTCATGGAACGAACCTTACAAAGGAAACTTCGGCCAACTGATG---ATGT 1851 Query 99041 GTAAACA---CAACCCACATCTAAAAATCCTACCCAGTATCGGTGGTTGGACTCTTAGC- 99096 ||||| | ||| | || || || | || |||| || |||||| || || Sbjct 1852 TGAAACAGGCGAGACCAGACCTCAAGATTTTGCCTTCCGTCGGCGGCTGGACT-TTGGCT 1910 Query 99097 GACCCCTTCTATTTTTTCGCCGATGATTACAAGCGCAAAGTGTTCGTAGACTCGGTTCGT 99156 || || |||| ||| ||| | || | ||||| | ||||| | || || Sbjct 1911 GATCCATTCTTTTTCTTCACTGACAAGACAAAGCGTGACCGTTTCGTTGCTTCCGTAAAA 1970 Query 99157 GAATTCCTACAGGTGTGGAAATTTTTCGACGGTGTAGACATCGACTGGGAGTTTCCTGGC 99216 || ||||| ||| |||||||| || ||||| || || ||||| |||||||| ||||| Sbjct 1971 GACTTCCTCCAGACCTGGAAATTCTTTGACGGCGTCGATATCGATTGGGAGTTCCCTGGA 2030 Query 99217 GGAAAGGGGGCCAACCC 99233 || || || || ||||| Sbjct 2031 GGTAAAGGCGCTAACCC 2047 >seq67196 Length=1848 Score = 96.9 bits (106), Expect = 4e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| || |||||||| ||| || || || ||||||||||| ||||| |||||| | Sbjct 23 ACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTGCGCCC 82 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || || || ||||| ||||| |||| | ||||||||| | || | | |||||| Sbjct 83 ATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGGATCCCCTCCTT 142 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 || ||||| || | || | | ||||| | || || || | || || Sbjct 143 ATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTACCTCTAGAGTAAT 202 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || |||| |||||||||||||| ||||| Sbjct 203 AGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 238 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 |||||| |||||||| | || || ||||||||||| ||||| ||||| ||||| | Sbjct 251 ACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGTGCGGCC 310 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||| || || || || |||| || || || || | ||| | | ||||| Sbjct 311 ATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACCTTCCTT 370 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| ||||| |||| | | | ||||| | || || || | ||||| Sbjct 371 ATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAGAGTGAT 430 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || |||| |||||||||||||| ||||| Sbjct 431 AGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466 >seq131720 Length=1042 Score = 91.5 bits (100), Expect = 2e-13 Identities = 398/616 (65%), Gaps = 19/616 (3%) Strand=Plus/Plus Query 99334 TACGAACTGACAAGTGCCGTGGGCGCCGGTTACGATAAAATCGACGTGGTCGATTACTCT 99393 ||||| |||| |||| | | || |||| || || ||| | || ||||||||| Sbjct 80 TACGAGTTGACGTCTGCCATCAGTGCTGGTTGGGACAAGATCCAAGTCGTCGATTACAGC 139 Query 99394 ACAGC-CAGTCAATATTTGGACCATGTGTTTTTAATGAGTTACGATTTTAAAGGCGCCTG 99452 |||| ||| |||| ||||||| | || || ||||| |||||||| || || || || Sbjct 140 GCAGCGCAGA-AATACATGGACCACATATTCTTCATGAGCTACGATTTCAAGGGAGCGTG 198 Query 99453 GTCCAACACCGACT-TGGGTCATCAAACACCATTGTATGCACCATCGTGGAACTCCGAAG 99511 |||||| ||| | ||||| || | | |||| || ||||| ||| | |||||| Sbjct 199 GTCCAATGAT-ACTCTTGGTCACCAGGCTTCTCTGTACGCTCCATCTTGGCAG-CCGAAG 256 Query 99512 -AGAGATACACAACCGATTATGCGGTTAAACAGCTATTAAAGAAAAAAGTGCCTTCTCAC 99570 ||| ||||| || |||| | || ||| | | || | || ||| | || | Sbjct 257 GAGACTTACACGACTGATTTCGGCGTGAAATACTTGTTGGCGCAAGGTGTGAATCCTAAG 316 Query 99571 AAGATTGTAGTGGGAGTCGCCATGTACGGCAGAGGATGGAGTGGAGTGCATGACTACAAA 99630 |||||||| || || || ||||||||||| | || |||| || || || | || || Sbjct 317 AAGATTGTGGTTGGTGTTGCCATGTACGGACGTGGCTGGACCGGTGTCCACGGTTATGAA 376 Query 99631 AATAATAACGTTTTTACGGGTGTGGCCACGGGACCGGTAAAAGGCACCTGGGAAAACGGT 99690 | | || ||| || || || ||||| || || ||||| || ||| || | ||| Sbjct 377 GGTGACAATCCTTTCACTGGCAATGCAACGGGTCCTGTTAAAGGTACTTGGCAAGATGGT 436 Query 99691 GTTGTTGATTATAGGCAGGTCGAAGA-GCTCAAAAACAAC----AATTACACATACGCAT 99745 || || || || || | | | ||| | | | | | | || | ||| | Sbjct 437 GTGGTGGACTACAGAGAAATAGCAGATGAT--ATAGCTGCTGGGAAATGGGAGTACCATT 494 Query 99746 ACGACAAAGTGGCCGAGGCGGCATATATTTACGGTGGCGCCGACCAGGCGTTGAATTTAA 99805 | || || ||||| | ||| |||| | | | | | | | ||| || | || ||| Sbjct 495 ATGATAAGGTGGCACAAGCGCCATACGTGTTCAG-GAAGGCCACC-GGAG----ATCTAA 548 Query 99806 TTTCTTACGACGACTCATCGTCTGTACTAGCAAAAGGTAATTACGTTTTACAAAACAATC 99865 | | |||||||| | || || ||| ||||| || ||||| | | ||||| Sbjct 549 TAACGTACGACGATGCCAGATCAGTTATAGAGAAAGGCAAATACGTCAGAAATAACAAAT 608 Query 99866 TCGGAGGTTTATTTGCTTGGGAAATCGATGCCGACAACGGTGACTTGTTAAACGCCATGA 99925 | || ||||| || || |||||||| || || ||||| |||||| | || || || |||| Sbjct 609 TGGGTGGTTTGTTCGCGTGGGAAATTGACGCGGACAATGGTGACATATTGAATGCTATGA 668 Query 99926 ACACAGGTTTGGGTAA 99941 ||| ||| | || || Sbjct 669 ACATGGGTCTCGGCAA 684 >seq193007 Length=659 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||||||| || || |||||||||||||||||||| ||||| | || || Sbjct 422 ACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTCA 481 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || || || || || || || | ||||| ||||| | || | | || ||||| Sbjct 482 AGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGA 541 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 || || |||| || | | ||||| | ||| || || | ||||| |||||| Sbjct 542 ATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTTTG 601 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || |||||||| ||||| Sbjct 602 CCAGTAAGTGTCTTGACAAAGATCTGCAT 630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563492781314760