Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq131719 197 1e-45
seq131720 107 2e-18
seq15021 105 7e-18
seq193007 95.1 1e-14
seq144394 87.8 2e-12
seq228722 86.0 6e-12
>seq131719
Length=2163
Score = 197 bits (218), Expect = 1e-45
Identities = 346/495 (70%), Gaps = 8/495 (2%)
Strand=Plus/Minus
Query 62212 GGGTTGGCGCCCTTGCCGCCCGGAAACTCCCAGTCCACGTCCAGGCCGTCGAACAGCTTC 62271
||||| ||||| || || || || |||||||| || | || | |||||| || | |||
Sbjct 2047 GGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTC 1988
Query 62272 CACGTCTGCAGAAACTCGCGCGCCGACTCGACGAACGCGCGCCGCGCGTTCGC--GTC-G 62328
|| ||||| || || || | || | ||||| || | | ||| || | ||| |
Sbjct 1987 CAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAA-CG-GTCACGCTTTGTCTTGTCAG 1930
Query 62329 TGCATATGGTAAAACGGATCGGACAGGGTCCAGCCGCCGATGGAGGGCAGCACGCGCAGG 62388
|| | | | || ||||| | || ||||||||||||| ||| |||| | |||
Sbjct 1929 TGAAGAAAA-AGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTGAGG 1871
Query 62389 TGCGGGTGCGCTTTCTTGATGGCCATCAGCTGGCCGAAGTTGCCCTTGTACGGCTCGCTC 62448
| || ||| | || | |||||| ||||||||||| || ||||| || ||| ||
Sbjct 1870 TCTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTTC 1811
Query 62449 CACGCGGTCACGCCCTTTTGCGGCTTTTGCACGGCCGCCCACGGGTCGTGCACCGCCAGT 62508
|| | | | ||||||||| || || || | || ||||| ||||| || | | || |
Sbjct 1810 CATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACACT 1751
Query 62509 TTGAAGTCGTCGCGGCCCGCGCACGAGCGCTGCAGCGCCTCGAAGCTGCCCGCGATGGAC 62568
|||||||| |||||||| ||| || ||||| || |||| ||| |||||| | || |
Sbjct 1750 TTGAAGTCTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATCTCC 1691
Query 62569 TTGAGGCTGTCGTTGATGCCGTCCCCGCCGCACATCGGCACGAAGCCGTACAGCAGATGC 62628
|| || ||||||||||||||||| || ||||| ||||| | ||| ||||||| || ||
Sbjct 1690 TTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAGTGA 1631
Query 62629 GTGAGGTTGGGCACGGGCACCTTGTCGGCGGGAAACTCGCGTCCG-TACACGCCCCACTC 62687
|| || ||||| | ||||| ||| |||| |||| | || | ||||| ||||| ||
Sbjct 1630 GTCAGATTGGGGATCGGCACGCGGTCCACGGGGAACT-TCCTCGGATACACTCCCCATTC 1572
Query 62688 GACGAAATAGGCGCC 62702
||||| || || ||
Sbjct 1571 TACGAAGTAAGCTCC 1557
>seq131720
Length=1042
Score = 107 bits (118), Expect = 2e-18
Identities = 200/291 (69%), Gaps = 2/291 (1%)
Strand=Plus/Minus
Query 61828 ACGCCGGTCCAGCCGCGTCCGTACATGGCCACGCCGAGCACGATCTTGTCGGCGGGCACG 61887
|| ||||||||||| |||||||||||||| || || | ||| ||||| | | |||
Sbjct 363 ACACCGGTCCAGCCACGTCCGTACATGGCAACACCAACCACAATCTTCTTAGGATTCACA 304
Query 61888 CCCTGCGCTAACAGCTGACGCACCGCGTTGTCGGCGGTGTAGGGCTCGTCGGGCCGCCAC 61947
|| ||||| |||| | ||| || || | ||||| | ||| | ||| ||||
Sbjct 303 CCTTGCGCCAACAAGTATTTCACGCCGAAATCAGTCGTGTAAGTCTCCTTCGGCTGCCAA 244
Query 61948 GACGGCGCGTACAGCGCGGTCTGGTGGCCCAGCTCGGTGGTGGACCACGCGCCCTTAAAG 62007
|| || |||||||| | | |||||| || || |||||||||| ||||| ||
Sbjct 243 GATGGAGCGTACAGAGAAGCCTGGTGACCAAGAGTATCATTGGACCACGCTCCCTTGAAA 184
Query 62008 TCGTAGCTCATCaaaaaaaTGCGGTCGAGCGAGCGGTGCGC-GCGCCCGTAGTCCACGAC 62066
||||||||||| || || ||| |||| | | ||||| ||| | ||| || |||||
Sbjct 183 TCGTAGCTCATGAAGAATATGTGGTCCATGTATTTCTGCGCTGCG-CTGTAATCGACGAC 125
Query 62067 GGCGATCTTGTCGTCGCCGGCGCCGATGGCGCTGGTCAGCTCGTACGTCCT 62117
||||||||| || || | |||||| |||| |||||| ||||
Sbjct 124 TTGGATCTTGTCCCAACCAGCACTGATGGCAGACGTCAACTCGTATTTCCT 74
>seq15021
Length=1916
Score = 105 bits (116), Expect = 7e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
|||||| |||||||||||||| || ||||| || ||||||||| | || || ||||| |
Sbjct 727 AATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGGCTTC 786
Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
||||| | ||| | |||| || || | || |||||||| ||||| | || ||
Sbjct 787 CGACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCTCCTGATCA 846
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | || || ||||| |||| |||| ||||| || || |||||
Sbjct 847 ACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCTGATTACAA 906
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTG 38453
|| || || ||| | || || || ||||||
Sbjct 907 TATTCAGAAAGAATCTACTCTTCACTTGGTG 937
>seq193007
Length=659
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || |||||||| ||||| | || || || | |
Sbjct 630 ATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATCG 571
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | |||| ||||| | |||||||| || |||||| | ||||||
Sbjct 570 GACACTATTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAA 511
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | || || ||||| || || || | ||||| || |||||||||
Sbjct 510 CAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTATCCGACTACAAT 451
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| || ||| | || |||| ||||| || ||
Sbjct 450 ATCCAGAAAGAATCTACATTGCACTTGGTTCTCCG 416
>seq144394
Length=367
Score = 87.8 bits (96), Expect = 2e-12
Identities = 119/164 (73%), Gaps = 4/164 (2%)
Strand=Plus/Plus
Query 126737 GGCGGCGTGTTCACCTCCGCATCGCACACAGGCGAGCGGTCGGTGACAG--TGATGGCTG 126794
||||||||| ||||||||||||||||||||||||| ||||| ||| | || |
Sbjct 3 GGCGGCGTGCGGGGCTCCGCATCGCACACAGGCGAGCGGGCGGTGGCAGCCTTTTGAC-- 60
Query 126795 CTGTGACGAAATTGTTGGCAGCGATGACATTGCGCGGGGCGGCGCTTGCCGCGCCACGCC 126854
|||||| || || || ||||| || || || |||| ||| || ||||| ||
Sbjct 61 GAGTGACGGAACCCCTGACACCGATGGCACTGTGCCGGGCCCTTCTTACCTCGCCATGCT 120
Query 126855 TCAATGATGACGCCGGTGATGCCAAGCAATTCCGTCACTTGGTA 126898
|| |||||||| ||||| |||| | || |||| ||| |||||
Sbjct 121 TCTATGATGACCCCGGTCATGCACATCAGTTCCCTCAACTGGTA 164
>seq228722
Length=1040
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/209 (70%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 126668 GTTGGCCGGGTGGGGCCCTCCGCAGTTGCAGCACGTAGCCGGCGCCTCACGGGGGCGGCT 126727
||| |||||||| || || | |||||| ||| || || ||| || || |||||
Sbjct 302 GTTTGCCGGGTGTGGTCCGCTGCAGTTAGCGCAGGTCGCGGGCTCCGACCGCGGGCGCGG 243
Query 126728 ACAGTGCATGGCGGCGTGTTCACCTCCGCATCGCACACAGGCGAGCGGTCGGTGAC-AGT 126786
||||| |||||| ||| || |||||||| ||||||||||| || ||||| | |
Sbjct 242 ACAGTCGGCGGCGGCATGTGGGCCACCGCATCGTACACAGGCGAGTGGGCGGTGGCAACC 183
Query 126787 GATGGCTGCTGTGACGAAATTGTTGGCAGCGATGACATTGCGCGGGGCGGCGCTTGCCGC 126846
||| || ||| | ||| ||| ||||| ||||| || ||||| | ||| || |
Sbjct 182 CTTGGATG-AGTGTCTAAACCCTTGACAGCGGTGACACTGGGCGGGCCCTTTCTTACCTC 124
Query 126847 GCCACGCCTCAATGATGACGCCGGTGATG 126875
|||| |||||||| | || || || |||
Sbjct 123 GCCAGGCCTCAATCGTCACCCCTGTCATG 95
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 498628122593920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |