Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq243489 192 2e-43 seq215044 154 6e-32 seq67196 141 4e-28 seq138108 131 7e-25 seq15021 122 3e-22 seq193007 116 1e-20 >seq243489 Length=2729 Score = 192 bits (212), Expect = 2e-43 Identities = 263/367 (72%), Gaps = 8/367 (2%) Strand=Plus/Plus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 ||||||||||||||||| || ||||||| | || || ||||| ||||| || ||| | Sbjct 529 TTTGCTCCTGAAGAAATCTCTGCTATGGTCTTGACCAAGATGAAGGAAACTGCTGAAGCA 588 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 ||| | || ||||||| |||| || | ||||| || || || ||||||||||| Sbjct 589 TATCTGGGCAAGAAAGTTACTCATGCTGTTGTCACTGTCCCTGCATACTTCAATGATGCT 648 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 || || || || || || ||||| || || |||||| | |||||| | |||| || Sbjct 649 CAGCGCCAGGCTACCAAGGATGCTGGTGTCATCGCTGGTCTTAATGTTATGAGAATCATC 708 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA-GAAGa 451476 ||||| ||||||||||||||| | || ||||| || | | |||||| | | || Sbjct 709 AATGAGCCTACAGCAGCTGCTATTGCCTATGGTCT-------TGACAAGAAAGAGGGTGA 761 Query 451477 aaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAAT 451536 ||| ||| | | || ||||| || ||||| || ||| |||| ||| | || | || Sbjct 762 AAAGAATGTCCTTGTCTTTGACTTGGGTGGTGGTACTTTTGATGTGTCTTTGCTCACCAT 821 Query 451537 TGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 ||| | || || ||||||||| || ||||||||||||||||| | || ||||| || Sbjct 822 TGACAACGGAGTCTTTGAAGTAGTAGCCACCAATGGTGATACTCACTTGGGTGGTGAGGA 881 Query 451597 TATTGAT 451603 ||||| Sbjct 882 CTTTGAT 888 Score = 84.2 bits (92), Expect = 9e-11 Identities = 228/349 (65%), Gaps = 0/349 (0%) Strand=Plus/Plus Query 452188 TACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAAT 452247 ||| || |||||||| || | ||| || || || || | |||||| |||||| |||| Sbjct 1467 TACTGCTAGTGATAATCAGCACACTGTCACCATCCAGGTTTATGAAGGTGAACGTCCAAT 1526 Query 452248 GACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAG 452307 ||| || || | ||| ||| | || ||| | || || ||| || || Sbjct 1527 GACTAAGGACAACCACTTACTTGGAAAGTTCGATCTAACTGGAATCCCACCTGCACCGAG 1586 Query 452308 GGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAG 452367 || | || || |||||| | |||| ||| ||||||| |||||||| | | ||| Sbjct 1587 AGGTATCCCCCAGATTGAAGTCACCTTTGAGATTGATGCCAATGGTATATTGCAAGTGTC 1646 Query 452368 TGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCG 452427 ||| | || || | ||||||| || || ||| || || |||||| | ||| | Sbjct 1647 TGCTGAGGACAAGGGAACTGGAAACCGGGAGAAGATTGTCATCACCAATGATCAGAACAG 1706 Query 452428 TTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGA 452487 ||| | |||||| ||||||| |||| | | || || || || || |||||||| Sbjct 1707 ATTAACACCAGAAGACATTGAAAGAATGATCAAGGATGCTGAGAAGTTTGCTGATGATGA 1766 Query 452488 TGAACAAGTTAGAAAACATGTTGAAGCTAAAAACAAACTAGAAGGATAT 452536 | || | | ||| ||||||||||| ||| | || ||| | ||| Sbjct 1767 CAAGAAACTAAAGGAACGTGTTGAAGCTAGAAATGAGCTTGAAAGCTAT 1815 >seq215044 Length=4420 Score = 154 bits (170), Expect = 6e-32 Identities = 262/376 (70%), Gaps = 13/376 (3%) Strand=Plus/Plus Query 451233 AAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAG 451292 ||| |||| ||||||| |||||||| || ||||| | || |||||||| || || |||| Sbjct 2060 AAAATTTT-CTCCTGAGGAAATTTCGTCAATGGTCTTGACCAAAATGAAGGAGACTGCAG 2118 Query 451293 AACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATG 451352 | ||| | ||| | || | ||||| || || |||||||| |||||||| || | Sbjct 2119 AGACATACCTCGGTGGAACGGTGAAAGATGCTGTTATAACTGTTCCAGCTTATTTTAACG 2178 Query 451353 ATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAA 451412 || | || | ||||| || |||||||| ||| |||||| | | | || ||| | ||| Sbjct 2179 ATTCTCAGAGACAAGCTACAAAAGATGCTGGAACTATTGCAGCTCTTAACGTTATCAGAA 2238 Query 451413 TTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAA---GAAA 451469 |||| || || ||||||||||| || ||||||| || || | || |||| ||| Sbjct 2239 TTATCAACGAGCCTACAGCAGCCGCATTAGCATACGGTCTTG----ATAAAAACTTGAA- 2293 Query 451470 CAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTAC 451529 | ||| |||||| || | | ||||| |||| ||||| ||| |||| ||| | | Sbjct 2294 -GGGAGACAAAAATGTTCTCATCTTTGACCTTGGCGGAGGTACTTTTGATGTTTCAATTC 2352 Query 451530 TTTCAAT---TGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAG 451586 | ||| ||||| | |||||||| | |||| || || || ||||| | Sbjct 2353 TGCAAATAGCTGAAGGATCTCTCTTTGAAGTTAGATCAACAGCAGGCGACACGCATCTCG 2412 Query 451587 GAGGTGAAGATATTGA 451602 ||||||||||| |||| Sbjct 2413 GAGGTGAAGATTTTGA 2428 >seq67196 Length=1848 Score = 141 bits (156), Expect = 4e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || |||||||| |||||||||||||||| ||||| || ||||| ||||| Sbjct 466 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATCACTCTAGAAGTTGAGCCATCT 407 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||||| | | ||| || ||||| ||||||||||| ||||| || |||||| Sbjct 406 GACACCATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGTATTCCGCCAGATCAA 347 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || || | || ||||| ||||||||||| | || | | || |||||| Sbjct 346 CAACGTCTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACCCTATCTGACTATAAT 287 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | || || | || ||||| Sbjct 286 ATCCAAAAAGAATCCACCCTTCA 264 Score = 114 bits (126), Expect = 5e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || |||||||| || ||||| ||||||||||| ||||| ||||| |||| Sbjct 694 ATGCAGATCTTTGTTAAAACCCTTACTGGCAAAACTATTACACTTGAAGTTGAGCCATCG 635 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| |||| |||||||||||||||||||| || || || || || Sbjct 634 GACACAATTGAAAACGTTAAGGCTAAAATTCAAGATAAGGAAGGGATCCCCCCAGACCAG 575 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | ||||| | || ||||||||||||||||| | || | | || || ||| Sbjct 574 CAGAGAATGATTTTTGCTGGCAAACAACTTGAAGATGGGCGTACCCTATCTGACTACAAT 515 Query 391230 ATTGATAAGGA 391240 ||| | || || Sbjct 514 ATTCAGAAAGA 504 Score = 111 bits (122), Expect = 6e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || |||||||| |||||||||||||||||||||| || || || |||| Sbjct 238 ATGCAGATCTTTGTTAAAACCTTGACTGGTAAAACTATTACTCTAGAGGTAGAGCCATCA 179 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | ||| || |||||||||||||| || || || || || || Sbjct 178 GACACTATTGAGAATGTAAAAGCCAAGATTCAAGATAAGGAGGGGATCCCCCCAGACCAG 119 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | |||||| | || ||||||||||||||||| | || | | || || ||| Sbjct 118 CAGAGACTGATTTTCGCTGGCAAACAACTTGAAGATGGGCGCACCCTATCTGACTACAAT 59 Query 391230 ATTGATAAGGA 391240 ||| | || || Sbjct 58 ATTCAGAAAGA 48 >seq138108 Length=4113 Score = 131 bits (144), Expect = 7e-25 Identities = 232/336 (69%), Gaps = 2/336 (1%) Strand=Plus/Minus Query 451103 GATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGAGAAAAAA 451162 ||||| |||||| | ||||| |||| || ||| |||| || || ||| || | || Sbjct 2240 GATGCCAAACGTCTTATTGGACGTAAGTTTGAAGATGCCACAGTCCAAGCTGACATGAAG 2181 Query 451163 TTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAATTATAAA 451222 || ||| ||| || || | | | ||| || || | ||| ||||| || ||| Sbjct 2180 CACTGGCCTTTTGAGGTTGTCAGTGATGGAGGTAAACCAAAGATTAAAGTAGCCTACAAA 2121 Query 451223 GGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAA 451282 |||||| ||| ||||| ||||||||| | || ||||| ||||| || ||||| Sbjct 2120 GGTGAAGATAAGACTTTCTTCCCTGAAGAAGTAAGCTCAATGGTGCTTACAAAGATGAAG 2061 Query 451283 GAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCT 451342 |||||||| || || | ||| | || ||||||||||||| ||||| || Sbjct 2060 GAAACAGCCGAGGCCTACCTCGGTAAAACTGTGCAGAATGCAGTAATTACGGTTCCAGCA 2001 Query 451343 TATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGG-ACATATTGCTGGTTTAAA 451401 || ||||| || | ||| | || || || |||||| |||| ||| || ||||| | || Sbjct 2000 TACTTCAACGACTCTCAAAGACAGGCCACAAAAGATTCAGGTACA-ATCTCTGGTCTGAA 1942 Query 451402 TGTTCTTCGAATTATTAATGAACCTACAGCAGCTGC 451437 ||||| ||||| || || |||||||| || ||||| Sbjct 1941 CGTTCTCCGAATCATCAACGAACCTACTGCTGCTGC 1906 >seq15021 Length=1916 Score = 122 bits (134), Expect = 3e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 391045 TTATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAAT 391104 ||| |||| | || ||||| ||||| || || || || || || || || || || || Sbjct 723 TTACAATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGG 782 Query 391105 CATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTG 391164 | || || | || ||| | | ||| || ||||||||||| || || |||||||||| Sbjct 783 CTTCCGACACTATAGAAAATGTGAAAGCCAAGATTCAAGATAAAGAGGGTATTCCTCCTG 842 Query 391165 ATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATT 391224 |||||||||| || || || | || |||||| | ||||| || | || | | |||| Sbjct 843 ATCAACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTTCTGATT 902 Query 391225 ATAATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 | |||||| | || || | || |||||||| || ||||| || |||||| Sbjct 903 ACAATATTCAGAAAGAATCTACTCTTCACTTGGTGTTAAGGCTCAGAGGA 952 >seq193007 Length=659 Score = 116 bits (128), Expect = 1e-20 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || ||||| ||||| |||||||| ||| | || |||||| |||| Sbjct 630 ATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATCG 571 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | ||| ||||||||||| || ||||| ||||| || || ||| Sbjct 570 GACACTATTGAGAATGTCAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAA 511 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || |||||||||||||||||| | || | | || || ||| Sbjct 510 CAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTATCCGACTACAAT 451 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | || || | ||| | ||||| || Sbjct 450 ATCCAGAAAGAATCTACATTGCACTTGGT 422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1969464273900804