Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq138108 223 3e-52 seq215044 194 1e-43 seq243489 174 1e-37 seq68900 132 4e-25 seq153960 86.0 5e-11 >seq138108 Length=4113 Score = 223 bits (246), Expect = 3e-52 Identities = 836/1296 (65%), Gaps = 20/1296 (2%) Strand=Plus/Plus Query 517238 TTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAAT 517297 ||||| || || || || |||| | ||| || || || || || || || | ||| || Sbjct 955 TTGTTGGTGGACTTCTCGACGGCGGACACGTTCAGGATGCCGTTTGCGTCAATATCGAAG 1014 Query 517298 GTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTT 517357 || || || || ||||| || || | | ||||||| || || || || | || || Sbjct 1015 GTCACCTCGATCTGAGGCACGCCACGCGGAGCAGGGGGAATGCCAGTCAGTTCGAACTTT 1074 Query 517358 CCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACT 517417 || || || || || || || | || ||||||||||||| |||||| || Sbjct 1075 CCAAGTAAGTTGTTGTCCTTGGTCATGGCACGCTCACCCTCGAAAACTTGGATGAGCACA 1134 Query 517418 ACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGT 517476 | | |||||| || || || || || || ||||| | | || || || || || Sbjct 1135 CCGGGTTGATTGTCAGAGTAGGTAGTGAAGG-TCTGGGTCTGCTTGGTGGGGATGGTGGT 1193 Query 517477 GTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGG 517536 ||| | | || | ||||||| | ||||| || || || | ||| || || || || Sbjct 1194 GTTGCGCTTGATGAGGGTGGTCATCACTCCACCAGCGGTCTCGATACCGAGCGACAGGGG 1253 Query 517537 AGTGACATCAACTAGGACAATATTT--TGAAGTTTTTCATCAGTTTGACCAACAAGAATA 517594 |||||| |||| | |||| | | || | || ||| | | || ||||| Sbjct 1254 AGTGACGTCAAGCA--ACAACAGGTCCTGTACTTCCTCAGACTTGTCGCCGTGGAGAATG 1311 Query 517595 GCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGT 517654 || || || | || || || || || || || || || || || | | || || || Sbjct 1312 GCAGCCTGGACGGCGGCGCCGTACGCGACGGCCTCGTCGGGGTTGATGGATTTGTTCAGC 1371 Query 517655 TTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCC 517713 | || |||||||| || | ||| || | || | || ||||||||||| | ||||| Sbjct 1372 TCCTTGCCATTGAAGAAGTCTTGCAACAGCTTTTGC-ACTTTAGGAATACGGGTGGATCC 1430 Query 517714 TCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTT 517773 || || | || || || || | || | || |||| || | ||| | | || Sbjct 1431 GCCGACGAGGACGATGTCGTGGATTTGAGCCTTGTCCATCTTGGCATCACGGAGAGACTT 1490 Query 517774 TTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCT 517833 || || || || | | ||| || | ||| | | ||||||||||| || || Sbjct 1491 CTCCACTGGCTCCATGGTTGATCTGAAGAGGTCAGCATTCAGTTCTTCGAAACGCGCCCT 1550 Query 517834 AGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTT 517891 || | || || | || || || || ||||| | || ||||||| |||||| | | Sbjct 1551 GGTGATAG--ACGTGTAGAAGTCGATACCTTCATATAAGGAATCAATTTCAATGCTGGCC 1608 Query 517892 TGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAG 517951 || || || ||||| || | || || || | ||||||||||| | || | ||| | Sbjct 1609 TGGGTAGATGAAGACAGGGTTCGCTTCGCTCTCTCACATGCTGTTCGGAGACGTCGCAGA 1668 Query 517952 GCTTTTGCTGATTGAT--TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACC 518009 || | || |||| | | | ||| | || || || |||||||| || | ||| | Sbjct 1669 GCCCT--CTTATTGGTGGTGAGATCCTTCTTGTACTTCCTCTTGAACTCCTGAACGAAGT 1726 Query 518010 ATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTC 518069 | || | ||| || ||||| || || || ||||| | || | || | |||| | Sbjct 1727 GGTTGACCATACGGTTGTCAAAGTCCTCTCCACCCAAATGTGTGTCACCAGCAGTAGATT 1786 Query 518070 TTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCA 518129 | || | || | ||||| |||| | ||| | | |||||| || |||||||| | Sbjct 1787 TCACCTCAAAGATACCATCCTCAATGGTCAAGATGGACACATCAAAAGTGCCACCACCAA 1846 Query 518130 TATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAG 518189 ||| |||||||| || || |||| || || || |||||||| || |||| | Sbjct 1847 GATCGAAAATAAGGACGTTACGTTCTCCACCTCCCTTCTTGTCAAGACCGTAAGCAATCG 1906 Query 518190 CAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCAT 518249 |||||||||| ||||| || || |||| | ||| || ||||||| ||| | |||| || Sbjct 1907 CAGCAGCAGTAGGTTCGTTGATGATTCGGAGAACGTTCAGACCAGAGATTGTACCTGAAT 1966 Query 518250 CTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAG 518309 |||| ||||| |||||||| || ||||| || ||||| ||||| ||||| || |||| Sbjct 1967 CTTTTGTGGCCTGTCTTTGAGAGTCGTTGAAGTATGCTGGAACCGTAATTACTGCATTCT 2026 Query 518310 TTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATG 518369 || |||||| | || || || |||| ||||| || | | | |||||| Sbjct 2027 GCACAGTTTTACCGAGGTAGGCCTCGGCTGTTTCCTTCATCTTTGTAAGCACCATTGAGC 2086 Query 518370 AAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTT 518429 | || ||| ||| | | ||| |||| || || | ||||| || | ||||| Sbjct 2087 TTACTTCTTCAGGGAAGAAAGTCTTATCTTCACCTTTGTAGGCTACTTTAATCTTTGGTT 2146 Query 518430 TATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG- 518488 || ||| || | | ||| | ||| ||||||| ||||| || | ||| ||| ||| Sbjct 2147 TACCTCCATCACTGACAACCTCAAAAGGCCAGTGCTTCATGTCAGCTTG--GACTGTGGC 2204 Query 518489 -TCATTAAAATCTCTACCAATTAATCGTTTTGCATC 518523 || | ||| | | ||||| | ||||| ||||| Sbjct 2205 ATCTTCAAACTTACGTCCAATAAGACGTTTGGCATC 2240 >seq215044 Length=4420 Score = 194 bits (214), Expect = 1e-43 Identities = 574/875 (66%), Gaps = 19/875 (2%) Strand=Plus/Minus Query 517690 TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 517749 ||| ||||||||||| | ||||||||| || | ||||| ||||| | || | | ||| Sbjct 2765 TACTTTAGGAATACGGGTTGATCCTCCCACCATTACAACGTCATGGATCTCTCGTGTATT 2706 Query 517750 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGA 517809 | | || ||| || || |||| || || | | | || ||||| ||||| Sbjct 2705 TAATCCTGCATCTTTTAGTGCTCTTTCGACTGGACCTAAAGTTTGCCTGAACAAATCTGA 2646 Query 517810 ACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAA 517869 ||| | |||||| ||| |||||| || | | | | |||| || |||||| || Sbjct 2645 ACACAATTCTTCAAATCGAGCTCTTGTTATTTTTGAGTAAAAATCTATACCTTCGTGCAG 2586 Query 517870 AGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACA 517929 | || | ||| | | | || || || || || | ||||| | | |||||| Sbjct 2585 GGCGTCTATTTCTAAACTTGCTTCTGTACTTGACGAAAGAGTTCGTTTTGATCTTTCACA 2526 Query 517930 TGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCT 517989 ||| || | || | | | || |||| || || | || | | || |||||| | Sbjct 2525 TGCAGTTCGGAGACGCCTCATAGCCTTTGGATTTTCTTTAAGATTTTTCTTGTATTTTTT 2466 Query 517990 CTTGAAATCTTCAACACACCATGTT-ACAAGACGATTATCAAAATCTTCACCTCCCAATT 518048 || || |||| | || | ||| || | | | ||||||||||||||||| | | Sbjct 2465 CTCAAACTCTTGA-CAAAAATGGTTCACCATTCTGCTGTCAAAATCTTCACCTCCGAGAT 2407 Query 518049 TAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCATCTTCAAGAGACAAAAGAG 518105 || | |||| || | ||| |||| || || ||| || | | || || | Sbjct 2406 GCGTGTCGCCTGCTGTTGATCTAACTTCAAAGAGAGATCCTTCAGCTATTTGCAGAATTG 2347 Query 518106 TTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG-- 518163 |||||| || || || || | ||||| || || ||||| ||| | | ||| Sbjct 2346 AAACATCAAAAGTACCTCCGCCAAGGTCAAAGATGAGAACATT--TTTGTCTCCCTTCAA 2289 Query 518164 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 518223 ||||||||||||||| || || || || || || || || || || |||||||| | ||| Sbjct 2288 GTTTTTATCAAGACCGTATGCTAATGCGGCTGCTGTAGGCTCGTTGATAATTCTGATAAC 2229 Query 518224 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 |||||| | ||||| |||| |||||||| || |||||||| || |||||||||||||| Sbjct 2228 GTTAAGAGCTGCAATAGTTCCAGCATCTTTTGTAGCTTGTCTCTGAGAATCGTTAAAATA 2169 Query 518284 TGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTG 518343 || |||||||| ||||| ||||| | || | ||| | || | ||| || | Sbjct 2168 AGCTGGAACAGTTATAACAGCATCTTTCACCGTTCCACCGAGGTATGTCTCTGCAGTCTC 2109 Query 518344 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATA-TTGCTTGGATTCAT 518402 |||||||| | || | |||||| ||||||| || || ||| | || ||| | || || Sbjct 2108 CTTCATTTTGGTCAAGACCATTGACGAAATTTCCTCAGGAGAAAATTTTCTTTG-TTGAT 2050 Query 518403 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATT--AATA--ACTTTAAATGGC 518458 ||| |||| || | | | ||||| | | || ||| || ||||||||| Sbjct 2049 TTTTATATTCGACAACGATTTTAGGTTT----TCCGCTTTCGGATACCACATTAAATGGC 1994 Query 518459 CAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTT 518518 || | | | ||| ||||| || | |||| ||| | || |||||| | |||||| Sbjct 1993 CATTGTCGGAGGTCTTGTTGAATTTTTGGATCATCAAATTTTCGACCAATGAGTCGTTTG 1934 Query 518519 GCATCAAAAATAGTATTGGTTGGATTAATTGCAGC 518553 ||||| |||| |||||| | ||||| || || || Sbjct 1933 GCATCGAAAACAGTATTTTTAGGATTCATAGCGGC 1899 >seq243489 Length=2729 Score = 174 bits (192), Expect = 1e-37 Identities = 442/662 (67%), Gaps = 18/662 (3%) Strand=Plus/Minus Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 |||||| || ||||| ||||| | ||||| || || ||| ||||| || | ||| Sbjct 888 ATCAAAGTCCTCACCACCCAAGTGAGTATCACCATTGGTGGCTACTACTTCAAAGACTCC 829 Query 518086 ATCTTCAA--GAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143 | |||| | || ||||| |||||| || |||||||||| ||||| | ||| Sbjct 828 GTTGTCAATGGTGAGCAAAGAC--ACATCAAAAGTACCACCACCCAAGTCAAAGACAAGG 771 Query 518144 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 |||||| |||| |||| | || ||||||||||| |||| |||||| || || || Sbjct 770 ACATTCTTTTCACCCTCTT---TCTTGTCAAGACCATAGGCAATAGCAGCTGCTGTAGGC 714 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 ||||| || ||||||| ||||||||||||||| || || ||||| || || || || Sbjct 713 TCATTGATGATTCTCATAACATTAAGACCAGCGATGACACCAGCATCCTTGGTAGCCTGG 654 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCA 518323 | || | ||| || || |||||||| ||||| | ||| |||| ||| |||| || || Sbjct 653 CGCTGAGCATCATTGAAGTATGCAGGGACAGTGACAACAGCATGAGTAACTTTCTTGCCC 594 Query 518324 ATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG 518383 | ||| || || |||| ||||| || | || | ||| | || |||| ||| || Sbjct 593 AGATATGCTTCAGCAGTTTCCTTCATCTTGGTCAAGACCATAGCAGAGATTTCTTCAGGA 534 Query 518384 GAATATTGCTTGGATTCA--TTTTGATATGAT-ACTTCAAAATATGGTTTATTACCAACA 518440 | | | |||| ||| || || | || || | || ||||| | Sbjct 533 GCAAAGATCTTG---TCACCTTGGGAAGTCATAACAGAGACATGGGGTTTGCTGTTCTTC 477 Query 518441 TTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 518500 | || || || || || || | |||| ||| || || || |||| | | || Sbjct 476 TCAACCACCTTGAAGGGGAAGAACTTCACATCATGCTGGACTGTTGAGTCACTCCATTCA 417 Query 518501 CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTG-CAGCTTGATA 518559 | |||||| | ||||| |||||||| | || || || ||| | | |||| || | Sbjct 416 CGACCAATGAGACGTTTAGCATCAAACACTGTGTTTTCAGGGTTAGTGGTCAGC-TGGTT 358 Query 518560 TTTGGCTGCATCTCCAATCAGATGTT--CTGTC-TCTGTAAATGAAACATATGATGGAGT 518616 || || ||||| ||||| ||| ||| | || | || |||| ||||| ||||| || Sbjct 357 CTTAGCAGCATCACCAATGAGACGTTCCCCATCAGCAGTGAATGCCACATAAGATGGTGT 298 Query 518617 TGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTAC 518676 | || || ||||| || || ||||| |||||||| ||||| | ||||||| || Sbjct 297 GATACGGTTGCCTTGGTCGTTAGCAATGATTTCAACACGGCCATTCTTGTATACACCCAC 238 Query 518677 AC 518678 || Sbjct 237 AC 236 Score = 96.9 bits (106), Expect = 3e-14 Identities = 306/466 (66%), Gaps = 10/466 (2%) Strand=Plus/Minus Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 |||||||||||||| | ||||| ||||||||||| || |||| |||||| | |||||| Sbjct 1634 ATACCATTGGCATCAATCTCAAAGGTGACTTCAATCTGGGGGATACCTCTCGGTGCAGGT 1575 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | || || |||| || | || || ||||| | | |||||| Sbjct 1574 GGGATTCCAGTTAGATCGAACTTTCCAAGTAAGTGGTTGTCCTTAGTCATTGGACGTTCA 1515 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGT-TTGATTATCTGAATAAGTTGTAAATACTCT 517452 || || ||| ||||| || || | || |||||||| | ||| | || | ||| Sbjct 1514 CCTTCATAAACCTGGATGGTGAC-AGTGTGCTGATTATCACTAGCAGTAGAGAAGA-TCT 1457 Query 517453 G-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTG 517511 | ||||| || || || ||||| | | ||| | || ||||| | |||||| Sbjct 1456 GTGATTTCTTGGTGGGGATGACAGTGTTGCGAGGAATGAGCTTAGTCATGACACCACCAA 1397 Query 517512 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 517571 | ||||| | ||| | | |||||| ||||||||| | ||||| | ||| | Sbjct 1396 CAGTTTCGATACCCATGGTAAGAGGGTTGACATCAAGCAACACAATGGCAT-CAGTGT-- 1340 Query 517572 CATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 517631 | ||| | || ||| | | || || | || |||||||| |||||||| |||| Sbjct 1339 --CCTGTTCG-CCGCTAAGTACTCCAGCCTGTACGGCCGCACCATAAGCAACAGCCTCAT 1283 Query 517632 CAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTA 517691 |||| || | | | | | | | || |||||||| || | | | | ||| | Sbjct 1282 CAGGGTTGATACCTCGAGATGGCTCCTTGCCATTGAAGAACTCTTTGACCAATTGCTGAA 1223 Query 517692 CCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC 517737 |||| || ||||| | || || ||||| || ||||| |||| ||| Sbjct 1222 CCTTGGGGATACGGGTGGAACCACCAACCAACACAATCTCATCCAC 1177 >seq68900 Length=4702 Score = 132 bits (146), Expect = 4e-25 Identities = 143/187 (76%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 870796 AATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAG 870855 ||| || || || | ||| |||||||| ||||||||||| |||||| | ||||||||||| Sbjct 3781 AATAATAGTTGACTTTTCATCTCCAAACATTGCTAAAGAGATGCATGTAGGACATTTAAG 3722 Query 870856 ATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGA-CACGATGTTT 870914 |||||| |||||||| || ||||||| | | | | ||| | || | || || || Sbjct 3721 ATCAACCATTATTGGAGATAGTATTTGTCGAACACTTG-AATTTTTGAACCATGACGTAC 3663 Query 870915 ATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATTA 870974 | | || || ||| ||||||| ||||||||||| || ||||||||||||||| || | Sbjct 3662 TTAGAATCAACCATCTGGGTGACTGGGGAACTCAGTTTGGTATGTTAATTGCTCATTTGC 3603 Query 870975 AAAATAA 870981 || |||| Sbjct 3602 AAGATAA 3596 >seq153960 Length=3310 Score = 86.0 bits (94), Expect = 5e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 || || || ||| |||| |||||||| ||||||||||| || ||| ||||||| |||| | Sbjct 1841 TGCACTCTTATTCTGACTGAGGGAGACTCAGCTAAAACTTTGGCTGTGTCTGGACTTAGT 1782 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 ||| | || ||||| ||||||| || || ||| | | || || | ||| || || | Sbjct 1781 GTTGTCGGCAGAGACCATTATGGTGTCTTTCCATTGAAGGGTAAGCCTTTAAACGTGCGA 1722 Query 635561 GATGC 635565 ||||| Sbjct 1721 GATGC 1717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3768562320114478