Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq168888 149 8e-31 >seq168888 Length=4095 Score = 149 bits (164), Expect = 8e-31 Identities = 892/1409 (63%), Gaps = 46/1409 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| | ||| | ||| | || | || ||||||||||| |||||||| ||| ||| Sbjct 1451 CCACAGCATATGCTGATGAGAGTATCTATTGGTATCCATGGTGAAGATATAGATGCTGCC 1510 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGG----TATGTTCATCCACGCAACACCAACCCT 111727 | | || ||| | | |||| || ||| || | ||||| | |||||||| Sbjct 1511 ATAAATACTTACAATTTGCTGTC---TGAAAAATATTTT-ACACACGCCAGCCCAACCCT 1566 Query 111728 CTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGA 111787 ||| |||| |||||| | || ||| |||| |||||| ||| | || | || || Sbjct 1567 GTTCTCAGCTGCCACACCACGGCCACAATTGTCATCTTGTTTTCTTGTAGCTATGAAAGA 1626 Query 111788 GGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGC 111847 || || | || || || | ||| | | ||||||| | || || || | || Sbjct 1627 TGACAGTATTGAAGGTATATATGATACTTTAAAACAATGTGCGCTTATATCTAAATCTGC 1686 Query 111848 TGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAG-AGGT 111905 |||||| ||||| | ||| | || | ||||||| || || || ||| | | ||| Sbjct 1687 TGGTGGAATCGGAGTCCACGTTCACTGTATCAGAGCTAA--AGGATCATATATCGCAGGC 1744 Query 111906 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 111965 ||||||||| ||| | || | | ||||||||| | || | ||| |||||| | Sbjct 1745 ACAAATGGTGTATCTAACGGACTCGTGCCAATGCTTAGGGTTTACAACAACACAGCAAGA 1804 Query 111966 TATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 |||||| | |||| ||| | ||| ||| || | ||||| ||| | ||||| ||| Sbjct 1805 TATGTAGATCAAGGTGGAAATAAACGCCCCGGAGCTTTTGCAGTGTATTTAGAGCCTTGG 1864 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAA----GGTGATGAGGAGGC 112078 || || || || | || || || || | || || || || | || || | Sbjct 1865 CATGCAGACATTTTTGAATTTCTCGA----CCTCAAAAAGAACACTGGCAAAGAAGAAGT 1920 Query 112079 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 112138 || || || | || | ||| | ||||| || ||||| || ||||| |||||||| Sbjct 1921 ACGAGCTCGAGAGTTGTTTTATGCTTTATGGATACCGGATCTTTTTATGAAAAGAGTTGA 1980 Query 112139 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCG 112197 | | || | ||| ||| | ||||| | | || || | | || || | Sbjct 1981 AAAAAATGAAGACTGGAGTCTTATGTGTCCTCATGATTGTCCTGGATTAGCTGACTGTTG 2040 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGA 112257 ||| || || || ||| || || | | ||||| |||||| || || | Sbjct 2041 -GGGAGATGAATTCGAAAATCTATATGAACAATACGAAAAAGAAAAGCGTTTTG-TGAAA 2098 Query 112258 CGGTGCCAGCTGCCGA--TGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315 | | | |||| || | | | |||||||| || || | | ||| || || || || Sbjct 2099 CAG-GTCAGCGCCCAAGTTTTATGGAAAGCCATAATCGAAGCCCAAGTTGAAACGGGAAC 2157 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 ||| |||||||||||||||||||| |||||| || ||||| |||||||| || || Sbjct 2158 ACCCTATATGCTTTACAAAGACGCTTGTAACAGGAAAAGTAACCAAAAGAACTTAGGCAC 2217 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGA-GACG- 112433 || || || ||| | || || || ||| | |||| || | | || ||| || | Sbjct 2218 TATAAAATGTAGTAACTTATGCACTGAGATCGTTGAATACAC-GTC--AGCTGACGAAGT 2274 Query 112434 -GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC 112492 || |||||||| | ||||| || ||| | || || ||| || ||| || || Sbjct 2275 CGCGGTGTGTAATTTAGCATCTATTGCTTTGAACATGTTTGTTAATGAAGA---TAAAAC 2331 Query 112493 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGT 112552 || | ||| | | ||| | | ||||| || |||| | | || ||||| |||| | | | Sbjct 2332 ATATAATTTTAATAAATTAAAAGAAGTCACCAAAATTATTACTCAAAACTTAAATAAAAT 2391 Query 112553 TATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 112612 |||||| ||||| || || | | || | ||||| |||||||| || | || Sbjct 2392 CATTGATGTTAATTTCTATCCGATCCCGGAGGCAAGAAAATCAAATATGAGGCATAGGCC 2451 Query 112613 AATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGT-CGCCACGCATTTG 112671 || || | ||||| ||||| || || ||| ||| |||| | ||| |||| || Sbjct 2452 TATAGGAATTGGTGTTCAAGGGCTAGCAGATACATT-TGTCTTGATGCGCATTGCATATG 2510 Query 112672 ATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTC 112731 | || | ||||| | || | ||| | |||||||| || || ||| ||| || | Sbjct 2511 AAAGTGATGCAGCGATGAAACTTAATCAACAAATATTTGAAACCATTTATTACGGGGCAC 2570 Query 112732 TTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTC 112791 | || || |||| || | ||||| |||| ||||| || | || || | Sbjct 2571 TAGAAGCTAGTTGTGAACTTGCAGAAAAGTATGGGGTTTATGACACTTACGAAGGAAGCC 2630 Query 112792 CAGCTTCACAAGGGGTGCTTCAATTTGATATGTGG---GAAGGTGAGACCAAGCTTCACT 112848 || | ||||| | | |||| || |||||| || ||| | ||| | Sbjct 2631 CATCCAGTCAAGGTATATTACAATACGACATGTGGAGCAAAACCCCCACCGACCTT---T 2687 Query 112849 ACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908 ||||||| ||| | || ||| | || || | ||| | | || | | || Sbjct 2688 GGAACTGGGATGCTTTAAAAGAAAGAATTTCTAAGCATGGTTTGAGAAATTCTTTATTAT 2747 Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968 | || || ||||||||||| ||||| || ||||| | ||||| ||||||| ||||||| Sbjct 2748 TAGCTCCTATGCCAACAGCATCCACGGCTCAAATTCTTGGTAACAATGAATCATTTGAAC 2807 Query 112969 CCTACACGACGAACATCTATCTGAGAAGA 112997 | | ||| | || || || | |||||| Sbjct 2808 CTTTCACATCAAATATATACCAAAGAAGA 2836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618825369005360