Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq67196 156 9e-33 seq15021 154 3e-32 seq193007 136 9e-27 >seq67196 Length=1848 Score = 156 bits (172), Expect = 9e-33 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||| | |||||| || | |||||| |||||||||||||||||||| | | ||| | Sbjct 705 AGTCGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGG 764 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || ||||| | |||||| || || || || || || || || ||||| || || |||||| Sbjct 765 CCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCT 824 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| ||||| || || |||||||| || || || ||| ||| ||||| | ||| Sbjct 825 TTGTCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTG 884 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | ||| ||||| ||||||||||| ||||| | |||||| Sbjct 885 ATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCATT 923 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | |||||| || ||||| ||||| |||||||| ||||| || || | || || | Sbjct 248 GAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGTGCG 307 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| ||||| || || || ||||| || |||||||| ||||| ||||| ||||| Sbjct 308 GCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACCTTC 367 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || || ||||| || ||||| || ||||||||||| || || ||||| || || Sbjct 368 CTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAGAGT 427 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || || ||||| ||||| || || | ||||| Sbjct 428 GATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || | ||| || ||||| ||||||||||| || | || || | ||||||||| Sbjct 486 ACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTACGCCCATCTTCA 545 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || || || || || | || || |||||||| || || ||||| || |||||| Sbjct 546 AGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGGATCCCTTCCTTATCTTGA 605 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||| ||||| ||||| |||||||| || |||||||| |||| || || Sbjct 606 ATTTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCAACTTCAAGTGTAATAGTTTTG 665 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| || || | ||||| Sbjct 666 CCAGTAAGGGTTTTAACAAAGATCTGCAT 694 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || | ||| || ||||| ||||||||||| || | || || | ||||||||| Sbjct 30 ACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTGCGCCCATCTTCA 89 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || || ||||| || |||| || |||||||| || || || || || |||||| Sbjct 90 AGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGGATCCCCTCCTTATCTTGA 149 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || || || |||||||| ||||| || || || || || |||| || || Sbjct 150 ATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTACCTCTAGAGTAATAGTTTTA 209 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| ||||| || || | ||||| Sbjct 210 CCAGTCAAGGTTTTAACAAAGATCTGCAT 238 >seq15021 Length=1916 Score = 154 bits (170), Expect = 3e-32 Identities = 168/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| || || || | ||||||||| || ||||| |||||||||||||| | ||| || Sbjct 949 TCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGT 890 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || ||||| | || ||||| || ||||| | ||||||||| || |||||||| || Sbjct 889 GCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGAATACC 830 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||| |||||||| || || || || || || ||||| ||| ||||| || || Sbjct 829 CTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTCCACCTCTAG 770 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| | ||||| || || | ||||||||||| | |||||| Sbjct 769 GGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCATT 727 >seq193007 Length=659 Score = 136 bits (150), Expect = 9e-27 Identities = 129/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| | || || ||||| || |||||||| |||| || || | |||||||| Sbjct 421 AACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTC 480 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || || || || || |||||||| || ||||||||||| ||||| |||||||||||||| Sbjct 481 AAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTG 540 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTC 195095 |||||| ||||| |||||||| |||||||| ||| ||||| Sbjct 541 AATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACTTC 585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1105969541889321