Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq168888 462 2e-125
seq105002 95.1 1e-14
>seq168888
Length=4095
Score = 462 bits (512), Expect = 2e-125
Identities = 1177/1792 (66%), Gaps = 40/1792 (2%)
Strand=Plus/Minus
Query 46973 tttttCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACC 47032
||| || || ||||||| || | |||| |||| ||||||| ||||||||||| ||
Sbjct 3214 TTTATCAACTGTAAACTGTATAGCATTAGCAGCTGGCTTTGTTCTCAAATAATACATGCC 3155
Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092
|| || | ||| | |||| |||| || || || ||||||||| ||| | ||
Sbjct 3154 GGTTTTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTTACCGTAATTTGG 3095
Query 47093 TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGC 47152
||| | | |||||| |||| ||| ||||| || |||||||||||||| ||||| || ||
Sbjct 3094 TTCAGCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACCCCTATCGGCAGC 3035
Query 47153 CATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTC 47212
||| | | || | | | |||||| || || ||||| | | | | || ||
Sbjct 3034 CATTTGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAGATCTCTTATTTC 2975
Query 47213 TTCTGGGAGA---TTAGTATTTTGAATAGATCCTCCgttttctataattttgttttttaa 47269
|| || | | | ||||||| || || || || | ||| || ||||| |
Sbjct 2974 TTTCGGAATAGCTTCTATATTTTGTATTGACCCATTATTGTGTATTATAAGATTTTTCAT 2915
Query 47270 ttcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTTG 47329
|| | ||| | | | ||||||||| || | |||| |||| |||| |||
Sbjct 2914 GTCTTCATCCCACAAATCTGCTTCAGTTAAATCACGCAATAAATGATGATTTACAACTTG 2855
Query 47330 AAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTC 47389
|| || ||||| | ||||| | |||||||| ||| | ||||| | |||||
Sbjct 2854 GAACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAGGTTCAAATGATTC 2795
Query 47390 ATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATT 47449
||| || |||| ||||||||| || |||||||| ||||| | || | |||||| |||
Sbjct 2794 ATTGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAATAATAAAGAATT 2735
Query 47450 TCTTACTCCATATTT-----TTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCT 47504
||| | |||| || || | ||| | ||| | |||||| ||
Sbjct 2734 TCTCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCA-----TCCCAGTTCCAAAGGTCG 2680
Query 47505 GATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTA 47564
| || |||| | || ||||| | || |||| ||| || || |
Sbjct 2679 GTGGGGGTTTTGCTCCACATGTCGTATTGTAATATACCTTGACTGGATGGGCTTCCTTCG 2620
Query 47565 TATGTTTTATAAGGACCGTATAGTTTA--GCGAGTTCACAACTTGCTTCCAATGCACTAT 47622
|| || | |||| ||| ||| ||| || ||||||||||| ||||| | ||| | |
Sbjct 2619 TAAGTGTCATAA--ACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAGTGCCCCGT 2562
Query 47623 AATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCTGATGA--TTCAAAAGG 47680
|||| || ||||||||||||| | || || ||| | ||| | || | |||| | |
Sbjct 2561 AATAAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGC--ATCACTTTCATATGC 2504
Query 47681 ATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATG 47740
| ||||||||||| | |||||||||||||| || || || |||||
Sbjct 2503 AATGCGCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGGCCTATG 2444
Query 47741 AGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATT 47800
| |||| || || || || | ||||| || | ||| || ||||||||
Sbjct 2443 CCTCATATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGATTTTATT 2384
Query 47801 TAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATT 47860
|| | |||| ||||||||||||||| | | | ||||
Sbjct 2383 TAAGTTTTGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAATTATATGTTTTATC 2324
Query 47861 TA---TAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGG 47917
| |||||||| | || | || |||||||||| |||||| || || || || | |
Sbjct 2323 TTCATTAACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGACTTCGTCAGC 2264
Query 47918 ATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTG 47977
|| |||| | || |||| |||| |||| |||||| ||||| || || || |
Sbjct 2263 TGACGTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGCCTAAGTTCTT 2204
Query 47978 ATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTAT 48037
|| ||| | ||||||| ||||| |||||||||||| | |||||||| ||||| |
Sbjct 2203 TTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTCCCGTTTCAAC 2144
Query 48038 CTGAGATTCAATGATAGATTTCC---AAAC---AGTCCTAGCCTTTATAACAGCTCTAGC 48091
|| | ||| || || | ||||| |||| | || ||| | | ||| | ||
Sbjct 2143 TTGGGCTTCGATTATGGCTTTCCATAAAACTTGGGCGCTGACCTGTTTCACAAAAC--GC 2086
Query 48092 TTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATC-CCCATACACATTAT 48150
||| || | |||||||| ||||| || || |||||||| ||| ||| | |
Sbjct 2085 TTT----TCTTTTTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCAACA-GTCAG 2031
Query 48151 CTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAG 48210
|||| |||||||| |||| ||||||||| | ||| || |||| |||| |||||
Sbjct 2030 CTAATCCAGGACAATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCAACTCTTT 1971
Query 48211 TCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCAT 48270
||||||| | ||| |||||||| | ||| ||| || || | || || || |||||| |
Sbjct 1970 TCATAAAAAGATCCGGTATCCATAAAGCATAAAACAACTCTCGAGCTCGTACTTCTTCTT 1911
Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330
||||| | ||| |||| || || ||||| || | || || |||||||| || |||||||
Sbjct 1910 TGCCAGTGTTCTTTTTGAGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGGCTCTAAAT 1851
Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390
| | ||| | | || || |||||||| || |||||||||| |||||| || || ||||
Sbjct 1850 ACACTGCAAAAGCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGCTGTGTTGT 1791
Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAAC 48450
| ||||| || | |||||| || | || || |||| |||||| || || | |||||
Sbjct 1790 TGTAAACCCTAAGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGCGATATATG 1731
Query 48451 TTCCACTAGCTCTTATATTACTAA-TTGAAATACCTATACCACCTGCCATTTTAGATATT 48509
||| ||||||| ||| || || | | || || ||||| || |||||||||
Sbjct 1730 ATCCTTTAGCTCTGATACAGTGAACGTGGACT-CCGATTCCACCAGCAGATTTAGATATA 1672
Query 48510 AGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAAT 48569
|| ||||| |||| | |||||||| || ||||| ||||| |||||| ||||| ||
Sbjct 1671 AGCGCACATTGTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCATAGCTACA 1612
Query 48570 AGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCA 48629
||||||||| |||| ||| || | || | | || | ||||| ||
Sbjct 1611 AGAAAACAAGATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGGGCTGGCG 1552
Query 48630 TGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCAT 48689
|| |||| |||| || || | ||| || || || | || ||| |||||||||
Sbjct 1551 TGTGTAAAATATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATCTATATCTTCA 1492
Query 48690 TGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAA 48741
||| ||||| |||||||| | ||| | ||||| || |||| |||| |||
Sbjct 1491 CCATGGATACCAATAGATACTCTCATCAGCATATGCTGTGGTCGTTCAGCAA 1440
>seq105002
Length=4868
Score = 95.1 bits (104), Expect = 1e-14
Identities = 116/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 48933 GTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGA 48992
|||||||| || || || ||||||| || || ||||||||| | |||||| || ||||||
Sbjct 3803 GTTTCTTTGTGTAGGTTGGATATAGCTAGTCGAGCAGCTAACACAGCATAGTCAGGATGA 3744
Query 48993 ATTGTTGTACAT-GTACTAGATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTAC 49051
| || || ||| || | ||||||||||||| |||||||||| ||| |||||
Sbjct 3743 TTAGTAGT-CATAGTTGCCGCGGTTTCTGCTGCTAAATTATCTAATTCAACAGTTGTTAC 3685
Query 49052 ACCTGTATATATTCCTTGAATAACTTTCATTGCTAT 49087
||| | || || || | |||||||| | || |||
Sbjct 3684 ACCAGAGTAAATCCCATTTATAACTTTTAATGTTAT 3649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560372846419320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |