Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq131719 219 3e-52 seq15021 183 2e-41 seq67196 159 3e-34 seq193007 141 7e-29 seq131720 127 2e-24 seq174000 84.2 2e-11 >seq131719 Length=2163 Score = 219 bits (242), Expect = 3e-52 Identities = 351/496 (71%), Gaps = 16/496 (3%) Strand=Plus/Minus Query 42942 GGATTAGCTCCTTTACCACCGGGAAATTCCCAATCAATATCGACGCCGTCAAAAAATTTC 43001 || ||||| |||||||| || || || |||||||| ||||||||||||||||| |||||| Sbjct 2047 GGGTTAGCGCCTTTACCTCCAGGGAACTCCCAATCGATATCGACGCCGTCAAAGAATTTC 1988 Query 43002 CAAGTGAGCAAAAACTCACGTACTGAATCCACAAATATTTTACGCTT-GT-TTGCATCGC 43059 || || | | || || ||| ||| | || || | |||||| || ||| || Sbjct 1987 CAGGTCTGGAGGAAGTCTTTTACGGAAGCAACGAAACGGTCACGCTTTGTCTTG--TCAG 1930 Query 43060 TGAAAAAATAAAACGGGTCGGACAATGTCCATCCACCTATCGAAGGTAACACTTTAAGAT 43119 |||| ||| | || || || | ||| ||||| || || | ||||| || | || || | Sbjct 1929 TGAAGAAAAAGAATGGATCAGCCAAAGTCCAGCCGCCGACGGAAGGCAAAATCTTGAGGT 1870 Query 43120 GAGGGTTAGCTTTTTTGGCTGCCATTAATTGACCAAAGTTGCCTTTGTACGGTTCATTCC 43179 || | || | ||| ||| | ||| || ||||| |||||||| ||||| |||| Sbjct 1869 CTGGTCTCGCCTGTTTCAACATCATCAGTTGGCCGAAGTTTCCTTTGTAAGGTTCGTTCC 1810 Query 43180 ACGAGGAAACACCTTTTTGTGGTTTCTGTATAGCCGCCCACGGATCGTGTATGGAAACTT 43239 | || |||| || |||||||||||||| | ||| ||||| || || || ||||| |||| Sbjct 1809 ATGAAGAAAGGCCCTTTTGTGGTTTCTGAAGAGCGGCCCAGGGGTCATGAATGGACACTT 1750 Query 43240 TGAAGTCGCTTCG-ACCCGC-ACAAGATTTTTGAAGAGCTTCAAAACTGCCAGGAATAGA 43297 |||||| ||||| |||| || || || || || | |||||||| ||| Sbjct 1749 TGAAGT--CTTCGCGGCCGCTGCAGGAACGCTGGAGTGCCTGGAAACTGCCCTCAATCTC 1692 Query 43298 TTTTAAACTGTCATTAATGCCGTCACCGCCGCATATCGGAATAAATCCGTACAACAAATG 43357 || | |||||| || |||||||| || ||||| |||||||| || ||||||||||| || Sbjct 1691 CTTCAGACTGTCGTTGATGCCGTCGCCTCCGCAGATCGGAATGAACCCGTACAACAAGTG 1632 Query 43358 AGACAAATTGGGTAAAGGCACTTTGTTGACAGGAAATGAACGACC----GTATACGCCCC 43413 || || |||||| | ||||| || || || |||| || || || |||| Sbjct 1631 AGTCAGATTGGGGATCGGCACGCGGTCCACGGG----GAACTTCCTCGGATACACTCCCC 1576 Query 43414 ATTCTACAAAATAAGC 43429 ||||||| || ||||| Sbjct 1575 ATTCTACGAAGTAAGC 1560 >seq15021 Length=1916 Score = 183 bits (202), Expect = 2e-41 Identities = 181/234 (77%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 101239 ATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATC 101298 ||| |||||||| | | ||| || || ||||| ||||||||||| || ||||||||||| Sbjct 958 ATTACCTCCTCTGAGCCTTAACACCAAGTGAAGAGTAGATTCTTTCTGAATATTGTAATC 899 Query 101299 GGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGG 101358 | | || | | | || |||||||| ||||| ||||| ||||| || |||||||| || Sbjct 898 AGAAAGTGTGCGGCCGTCTTCCAATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGG 839 Query 101359 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTC 101418 ||||| || |||||||||||||| || ||| ||| |||||| |||||| || | || Sbjct 838 AGGAATACCCTCTTTATCTTGAATCTTGGCTTTCACATTTTCTATAGTGTCGGAAGCCTC 779 Query 101419 CACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 ||| || || |||| || || || |||| |||||||| ||||||||||| || Sbjct 778 CACCTCTAGGGTGATGGTCTTCCCCGTTAGGGTTTTTACGAATATCTGCATTGT 725 >seq67196 Length=1848 Score = 159 bits (176), Expect = 3e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| ||||| | ||||||||| ||||||||||| ||||| || || | | || | | | Sbjct 251 ACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGTGCGGCC 310 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | || || || ||||| |||| ||| |||||||| |||||||| ||||| || Sbjct 311 ATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACCTTCCTT 370 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||| ||||| || ||| ||| |||| | |||||||| | || ||||| ||||||| Sbjct 371 ATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAACTTCTAGAGTGAT 430 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || || ||||| ||||| |||||||| Sbjct 431 AGTTTTACCAGTCAAGGTTTTAACAAAGATCTGCAT 466 Score = 145 bits (160), Expect = 6e-30 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 |||| ||| | ||| | || ||||||||||| ||||||||||| | | ||| | | | Sbjct 708 CGTAGAACAAGATGTAAAGTGGATTCTTTTTGAATATTGTAATCTGACAAAGTACGGCCG 767 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || ||||| ||||| || ||||| |||| |||||| ||||| || || || |||||||| Sbjct 768 TCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATACCTTCTTTG 827 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 || ||||| || ||| || | || | ||| || || | ||| ||||| | |||| | Sbjct 828 TCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCAAGGTGATC 887 Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || |||||||| || || |||||||| Sbjct 888 GTTTTTCCAGTCAAAGTTTTCACGAAAATCTGCAT 922 Score = 120 bits (132), Expect = 2e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 |||| ||| | ||||||||||| || |||||||| || | | || | |||| || Sbjct 486 ACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTACGCCCATCTTCA 545 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||| || || ||||| |||| | ||| || || || || || ||||| ||||||||| Sbjct 546 AGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGGATCCCTTCCTTATCTTGA 605 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| || || |||| | ||||| || | || |||||||| || | |||||| Sbjct 606 ATTTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCAACTTCAAGTGTAATAGTTTTG 665 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAG 101481 || || | ||||| ||||| |||||||| | ||||||| Sbjct 666 CCAGTAAGGGTTTTAACAAAGATCTGCATACCTCCGCGAAG 706 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 ||||||||||| || |||||||| || | | || | |||| || | ||| || || Sbjct 42 GTAGATTCTTTCTGAATATTGTAGTCAGATAGGGTGCGCCCATCTTCAAGTTGTTTGCCA 101 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 || || |||| | ||| || || || || || || || ||||||||||| || |||| Sbjct 102 GCGAAAATCAGTCTCTGCTGGTCTGGGGGGATCCCCTCCTTATCTTGAATCTTGGCTTTT 161 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 ||| | || | |||||| || | || || || ||||| | ||||| || || || ||| Sbjct 162 ACATTCTCAATAGTGTCTGATGGCTCTACCTCTAGAGTAATAGTTTTACCAGTCAAGGTT 221 Query 101453 TTTACAAATATCTGCAT 101469 || ||||| |||||||| Sbjct 222 TTAACAAAGATCTGCAT 238 >seq193007 Length=659 Score = 141 bits (156), Expect = 7e-29 Identities = 158/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || || | ||||||||||| || |||||||| |||| | || | |||| || Sbjct 421 AACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGATAGTGTGCGTCCATCTTC 480 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | ||| || || ||||| || | ||||||||| || || ||||| |||||||| ||||| Sbjct 481 AAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTG 540 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 |||||| ||| ||| | || | |||||| || | ||| ||||| | ||||| ||||| Sbjct 541 AATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACTTCTAAAGTGATAGTTTT 600 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||| || | || || ||||| ||||||||| Sbjct 601 GCCAGTAAGTGTCTTGACAAAGATCTGCATG 631 >seq131720 Length=1042 Score = 127 bits (140), Expect = 2e-24 Identities = 412/635 (65%), Gaps = 10/635 (2%) Strand=Plus/Minus Query 42263 AGCGTTCAACAAATCGCCGTTGTCAGCGTCAATCTCCCAAGCAAACAATCCGCCTAAATC 42322 ||| ||||| | || || ||||| |||||||| ||||| || ||||| || || || | Sbjct 664 AGCATTCAATATGTCACCATTGTCCGCGTCAATTTCCCACGCGAACAAACCACCCAATTT 605 Query 42323 ATTTTCGATCACATATTGCGCTTTGTCCAACACCGATTCGGCGCTGTCATAACTAATCAA 42382 || | | || |||| |||| || | || ||| ||| ||| || | || | Sbjct 604 GTTATTTCTGACGTATTTGCCTTTCTCTATAACTGATCTGGCATCGTCGTACGTTATTAG 545 Query 42383 ATTCCCCGTATC-TTGTTGAAAGACATACGCGGCTTTTGCCGTTTTATCATATGTGTATT 42441 || || || | || |||| || || | |||| |||| |||||||| ||| | Sbjct 544 ATCTCCGGTGGCCTTCCTGAAC-ACGTATGGCGCTTGTGCCACCTTATCATAATGGTACT 486 Query 42442 CGTAAT------CTTTTAGATTATTTTTAATCTGTCTATAGTCTACGACGCCATCTTCCC 42495 | | | | || || || | || | ||| ||||| || || ||||||| || Sbjct 485 CCCATTTCCCAGCAGCTATATCATCTGCTATTTCTCTGTAGTCCACCACACCATCTTGCC 426 Query 42496 AAGTACCCGAAACTGGACCTGTCGCAATACCCGTGAAGGGATTATTGTTTTGGTAATTGC 42555 ||||||| ||| ||||| || ||| | || ||||| ||||| | || ||| | Sbjct 425 AAGTACCTTTAACAGGACCCGTTGCATTGCCAGTGAAAGGATTGTCACCTTCATAACCGT 366 Query 42556 TTACTCCGGTCCAACCTCGTCCGTACATGGCCACGCCTAAAATTATTTTTTGAGGTTTCA 42615 || |||||||| || |||||||||||||| || || | | || || | ||| |||| Sbjct 365 GGACACCGGTCCAGCCACGTCCGTACATGGCAACACCAACCACAATCTTCTTAGGATTCA 306 Query 42616 CTTTTTGTTTCAA-AAGCGTTTGAACGGCATAATCTGCCGTGTAATGTTCGTTTTCGTTC 42674 | ||| ||| ||| ||| ||| | |||| | ||||||| || || | | Sbjct 305 CACCTTGCGCCAACAAGTATTT-CACGCCGAAATCAGTCGTGTAAGTCTCCTTCGGCTGC 247 Query 42675 CATTCGGGAGCATACAGATTTGTTTGATGGCCCAAATCTGAATTTGACCAAGCACCTTTA 42734 || ||||| |||||| | || || || | | ||| ||||| || || || Sbjct 246 CAAGATGGAGCGTACAGAGAAGCCTGGTGACCAAGAGTATCATTGGACCACGCTCCCTTG 187 Query 42735 AAGTCATAGCTCATTAAAAATATTTTATCCAAATAGTTTTGAGCATCGTTGTAATCGACA 42794 || || |||||||| || ||||| | |||| || || || || || |||||||||| Sbjct 186 AAATCGTAGCTCATGAAGAATATGTGGTCCATGTATTTCTGCGCTGCGCTGTAATCGACG 127 Query 42795 ATAGCGATTTTGTCGTCTCCCGCACTAATTGCGCTAGTCAATTCGTATTTGCGATTAGTT 42854 | ||| ||||| || ||||| || || ||||| |||||||| | |||| Sbjct 126 ACTTGGATCTTGTCCCAACCAGCACTGATGGCAGACGTCAACTCGTATTTCCTTCCAGTT 67 Query 42855 TCGTTTTCTAGTTCGTCCAGCATGTCGCGCAATTC 42889 || || |||| || ||| ||||||| ||| Sbjct 66 TCCGCAGAGAGCTCGTTCAACATCTCGCGCAGTTC 32 >seq174000 Length=6590 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 47029 TAATTTTTTGAATGTAATCTTCGCCTTTTACTAACAATACATGAAAACAGCGTGGAAACC 47088 ||| | |||| | |||||||| || ||||| | | | || ||| || |||| Sbjct 2907 TAACTCTTTGGACGTAATCTTTACCCTTTACAAGCTGGAGATAGGCACATCGACTGAACC 2966 Query 47089 AACAAGCATGCTGTTCCCACGGAATATCGCCTTGTTCCCAATCTTTCAAGCCGCCATCAC 47148 | | || || | ||||||||| || || | | |||||||||||| | ||||| |||| Sbjct 2967 ATCGTGCGTGTTCTTCCCACGGTATGTCATCGTTTTCCCAATCTTTAAGACCGCCGTCAC 3026 Query 47149 AATAATAACATTTTACCATGTCACCGCAACCGGTATAATAGAAACCGGCCTTTGATAATT 47208 ||||| | ||||| | ||||||| || |||||| |||| ||||||| | ||| | Sbjct 3027 AATAAAAGCATTTGGTCTTGTCACCTTGTCCTGTATAAAAGAAGCCGGCCTCGGCTAAAT 3086 Query 47209 CGTCAGGTGTTTGA 47222 | || ||| | ||| Sbjct 3087 CTTCCGGTTTCTGA 3100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395085173911491