Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq15021 102 7e-17
seq193007 91.5 1e-13
seq67196 86.0 5e-12
>seq15021
Length=1916
Score = 102 bits (112), Expect = 7e-17
Identities = 164/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
|||||| ||||| |||||||| ||||||| || ||||| ||| || ||| ||||
Sbjct 727 AATGCAGATATTCGTAAAAACCCTAACGGGGAAGACCATCACCCTAGAGGTGGAGGCTTC 786
Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671
|| || | | || | || || || | || || |||||||| | || ||||
Sbjct 787 CGACACTATAGAAAATGTGAAAGCCAAGATTCAA-GATAAAGAGGGTATTCCTCCTGATC 845
Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTA 28729
|||| || | |||||||| || |||||||||||||| | | ||| | | |||||
Sbjct 846 AACAACGATTGATCTTTGCTGGTAAACAATTGGAAGACGGCCGCACACTTT--CTGATTA 903
Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
|| ||||| |||||||||||||| ||| |||| ||||| | |||||||
Sbjct 904 CAATATTCAGAAAGAATCTACTCTTCACTTGGTGTTAAGGCTCAGAGGAGG 954
>seq193007
Length=659
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/212 (71%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || ||||| || ||| | || || ||||| || || ||| ||||| ||
Sbjct 630 ATGCAGATCTTTGTCAAGACACTTACTGGCAAAACTATCACTTTAGAAGTTGAACCATCG 571
Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || |||| || |||| || |||||||| || | ||| ||| ||
Sbjct 570 GACACTATTGAGAATGTCAAAGCCAAAATTCAA-GACAAAGAAGGTATTCCCCCAGACCA 512
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730
|||| | ||||||||||| || |||||| | |||||| | | ||||| |||| ||
Sbjct 511 ACAGCGTCTTATCTTTGCTGGAAAACAACTTGAAGATGGACGCACACTAT--CCGACTAC 454
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGT 28762
|| || || ||||||||||| ||||| ||||
Sbjct 453 AATATCCAGAAAGAATCTACATTGCACTTGGT 422
>seq67196
Length=1848
Score = 86.0 bits (94), Expect = 5e-12
Identities = 161/233 (69%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
|||||| || || || ||||| || || || ||||| || ||| ||| ||||||||
Sbjct 923 AATGCAGATTTTCGTGAAAACTTTGACTGGAAAAACGATCACCTTGGAAGTCGAACCTTC 864
Query 28613 AGAGACGGTGGCCGATC--TCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
||| || | | || | | |||| || | || |||||||| || | ||| ||||
Sbjct 863 AGATACTATCGA-GAACGTTAAAGCTAAGATTCAG-GACAAAGAAGGTATCCCCCCAGAT 806
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
|| ||| | || || ||||| || || || |||||||| ||| || | |||||
Sbjct 805 CAGCAGCGTCTGATTTTTGCTGGAAAGCAGTTGGAAGACGGCCGTACTTTGTCAGATTAC 746
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| |||||||||||||| ||| | || | || || || | || ||||| ||
Sbjct 745 AATATTCAAAAAGAATCCACTTTACATCTTGTTCTACGACTTCGCGGAGGTAT 693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424123871981877
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |