Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq215044 185 6e-41 seq138108 159 2e-33 seq243489 149 4e-30 seq67196 147 1e-29 seq119639 127 1e-23 seq68900 123 2e-22 seq193007 120 2e-21 seq15021 96.9 2e-14 >seq215044 Length=4420 Score = 185 bits (204), Expect = 6e-41 Identities = 302/430 (70%), Gaps = 9/430 (2%) Strand=Plus/Plus Query 474497 AATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACC 474556 |||||| |||||| |||| ||||| ||| || | |||||||| || ||||||||| | Sbjct 1908 AATCCTAAAAATACTGTTTTCGATGCCAAACGACTCATTGGTCGAAAATTTGATGATCCA 1967 Query 474557 ACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCA 474616 | | ||| || | || || ||||| ||||| ||| || | | || ||||| Sbjct 1968 AAAATTCAACAAGACCTCCGACAATGGCCATTTAATGTGGTATCCGAAAGCGGAAAACCT 2027 Query 474617 TATATAGAAGC--AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTT 474674 | || | | |||| | | | || | | ||||||| || || ||||||| | Sbjct 2028 AAAATCGTTGTCGAATATAAAAA--TCAACAAAGAAAATTTTCTCCTGAGGAAATTTCGT 2085 Query 474675 CAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACT 474733 ||||||| || |||||||||| | || || ||| |||| || || | || | Sbjct 2086 CAATGGTCTTGACCAAAATGAAGGAGACTGCAGAGA-CATACCTCGGTGGAACGGTGAAA 2144 Query 474734 GATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGAT 474793 ||||| || || ||||||||||| |||||||| |||||||| | ||||| || |||||| Sbjct 2145 GATGCTGTTATAACTGTTCCAGCTTATTTTAACGATTCTCAGAGACAAGCTACAAAAGAT 2204 Query 474794 GCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCA 474853 || |||| ||||||| |||||| ||| | | ||||| || || || |||||||||||| Sbjct 2205 GCTGGAACTATTGCAGCTCTTAACGTTATCAGAATTATCAACGAGCCTACAGCAGCCGCA 2264 Query 474854 CTTGCTTATGGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGA---T 474910 | || || ||||||||||| || | | ||| ||||||| | |||||||| | Sbjct 2265 TTAGCATACGGTCTTGATAAAAACTTGAAGGGAGACAAAAATGTTCTCATCTTTGACCTT 2324 Query 474911 TGTGGAGGTA 474920 | ||||||| Sbjct 2325 GGCGGAGGTA 2334 Score = 93.3 bits (102), Expect = 3e-13 Identities = 114/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 290810 CAAGTTTTGCTTCCAAGACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTT 290869 |||||||| | ||||||| |||| ||||| |||||||| || || || |||||||| Sbjct 2291 CAAGTTTTTAT--CAAGACCGTATGCTAATGCGGCTGCTGTAGGCTCGTTGATAATTCTG 2234 Query 290870 AATACATCAAGACCTGCAATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTA 290929 | || | |||| ||||||| || | | |||| || || || | || | ||| ||| Sbjct 2233 ATAACGTTAAGAGCTGCAATAGTTCCAGCATCTTTTGTAGCTTGTCTCTGAGAATCGTTA 2174 Query 290930 AAATAAGCAGGGACTGTAATAACAGCTTTTTCCAC 290964 |||||||| || || || |||||||| | || ||| Sbjct 2173 AAATAAGCTGGAACAGTTATAACAGCATCTTTCAC 2139 >seq138108 Length=4113 Score = 159 bits (176), Expect = 2e-33 Identities = 255/361 (71%), Gaps = 4/361 (1%) Strand=Plus/Minus Query 474518 GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGT 474577 ||||| ||| | | ||||| ||||| ||||| ||| |||| |||||| |||| ||| Sbjct 2240 GATGCCAAACGTCTTATTGGACGTAAGTTTGAAGATGCCACAGTCCAAGCTGACATGAAG 2181 Query 474578 CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATACACGCA 474637 || ||||||||| |||| | | || ||| ||||||||| | || ||| | || | Sbjct 2180 CACTGGCCTTTTGAGGTTGTCAGTGATGGAGGTAAACCAAAGATTAAAGTAGCCTACAAA 2121 Query 474638 GGTGAAACTAA-ACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAA 474696 |||||| ||| || | ||| || ||| || | |||||||| | | || ||||| Sbjct 2120 GGTGAAGATAAGACTTTCTTC-CCTGAAGAAGTAAGCTCAATGGTGCTTACAAAGATGAA 2062 Query 474697 ACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAG 474755 |||| || ||| | || || || || || ||||||||||||| ||||||| Sbjct 2061 GGAAACAGCCGAGGCC-TACCTCGGTAAAACTGTGCAGAATGCAGTAATTACGGTTCCAG 2003 Query 474756 CATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTA 474815 |||| || || || |||||| | || || || |||||| | || | ||| | ||||| | Sbjct 2002 CATACTTCAACGACTCTCAAAGACAGGCCACAAAAGATTCAGGTACAATCTCTGGTCTGA 1943 Query 474816 ATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 | ||| | || || || || ||||| || || || || ||||||| |||||||| |||| Sbjct 1942 ACGTTCTCCGAATCATCAACGAACCTACTGCTGCTGCGATTGCTTACGGTCTTGACAAGA 1883 Query 474876 A 474876 | Sbjct 1882 A 1882 >seq243489 Length=2729 Score = 149 bits (164), Expect = 4e-30 Identities = 338/497 (68%), Gaps = 15/497 (3%) Strand=Plus/Plus Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| ||||| || |||||||| || | | |||||||| ||||| | || ||| Sbjct 262 GTTGAAATCATTGCTAACGACCAAGGCAACCGTATCACACCATCTTATGTGGCATTCACT 321 Query 474449 GAAACTG---AACATCTTATTGGAGATGCTGCTAAATATCAAGCTG-CATCTAATCCTGT 474504 | || ||| ||| ||||| ||||||||||| | || |||| | |||| |||| Sbjct 322 GCTGATGGGGAACGTCTCATTGGTGATGCTGCTAAGAACCA-GCTGACCACTAACCCTGA 380 Query 474505 TAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCA 474564 || || | |||||||||||| | | ||||||||| | | ||| | || ||||| Sbjct 381 AAACACAGTGTTTGATGCTAAACGTCTCATTGGTCGTGAATGGAGTGACTCAACAGTCCA 440 Query 474565 ATCTGATATGC-GTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAG 474623 |||| || || || |||| |||||| | | | ||||| || | Sbjct 441 GCATGATGTGAAGTTCTTCCCCTTC-AAGGTGGTTGAGAAGAACAGCAAACCCCATGTCT 499 Query 474624 AAGCAAT-ACACGC--AGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGG 474680 | || || | |||||| | | ||| | || ||| |||| ||| | |||| Sbjct 500 CTGTTATGACTTCCCAAGGTGACAAGATC---TTTGCTCCTGAAGAAATCTCTGCTATGG 556 Query 474681 TTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAA-GTAACTGATGCA 474739 | || |||| ||||| |||| || ||||||| || |||||| || ||| |||| Sbjct 557 TCTTGACCAAGATGAAGGAAACTGCTGAAGCATATCTGGG-CAAGAAAGTTACTCATGCT 615 Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799 || | ||||| || ||||| || |||||| |||| || || || || || ||||| || Sbjct 616 GTTGTCACTGTCCCTGCATACTTCAATGATGCTCAGCGCCAGGCTACCAAGGATGCTGGT 675 Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859 || || |||||||||||| | | || || ||||| || |||||||| || |||| Sbjct 676 GTCATCGCTGGTCTTAATGTTATGAGAATCATCAATGAGCCTACAGCAGCTGCTATTGCC 735 Query 474860 TATGGTCTTGATAAGAA 474876 ||||||||||| ||||| Sbjct 736 TATGGTCTTGACAAGAA 752 >seq67196 Length=1848 Score = 147 bits (162), Expect = 1e-29 Identities = 166/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| | || |||||||| || |||||| | |||||| |||| ||| || Sbjct 245 ACGGAGACGCAAAACCAGATGAAGGGTGGATTCTTTTTGGATATTATAGTCAGATAGGGT 304 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||||||| || ||||||||||| || |||||||||||||| || ||||| || Sbjct 305 GCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAGACGTTGTTGATCTGGCGGAATACC 364 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||| || |||||||| ||||||| |||||| || |||| || | || ||| | Sbjct 365 TTCCTTATCCTGAATCTTGGCTTTGACATTTTCAATGGTGTCAGATGGCTCAA-CTTCTA 423 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || ||||||||||| || | || ||||| || || || Sbjct 424 GAGTGATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTG 463 Score = 111 bits (122), Expect = 1e-18 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| ||||||||||| | ||| |||||| || ||| || |||| ||| || Sbjct 17 ACGGAGACGCAGTACAAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGT 76 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||||||||| || ||||| ||||| || | || || || || || || || Sbjct 77 GCGCCCATCTTCAAGTTGTTTGCCAGCGAAAATCAGTCTCTGCTGGTCTGGGGGGATCCC 136 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||| ||||||||||| ||| ||| |||||||| || | || | | || | Sbjct 137 CTCCTTATCTTGAATCTTGGCTTTTACATTCTCAATAGTGTCTGATGGCTCTA-CCTCTA 195 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | |||||||||||||| || | || ||||| || || || Sbjct 196 GAGTAATAGTTTTACCAGTCAAGGTTTTAACAAAGATCTG 235 Score = 111 bits (122), Expect = 1e-18 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| ||||| ||||| | ||| |||||| || ||| || |||| ||| || Sbjct 473 ACGCAGACGCAGTACTAGATGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGGGT 532 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||||||||| || ||||||||||| | | || || || || || || || Sbjct 533 ACGCCCATCTTCAAGTTGTTTGCCAGCAAAAATCATTCTCTGCTGGTCTGGGGGGATCCC 592 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||| |||||||| || || || |||||| || || | || | || ||||| Sbjct 593 TTCCTTATCTTGAATTTTAGCCTTAACGTTTTCAATTGTGTCCGATGGCTCAA-CTTCAA 651 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||||||||| || || || || ||||| || || || Sbjct 652 GTGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATCTG 691 Score = 107 bits (118), Expect = 1e-17 Identities = 157/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATG--AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAG 480609 ||||| || || |||||||| ||||| | |||||| || ||| ||||| | | || Sbjct 702 CGAAGTCGTAGAACAAGATGTAAAGTGGA--TTCTTTTTGAATATTGTAATCTGACAAAG 759 Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669 | | | ||||| | ||||||||||||||||| ||||| || ||||| || || || | Sbjct 760 TACGGCCGTCTTCCAACTGCTTTCCAGCAAAAATCAGACGCTGCTGATCTGGGGGGATAC 819 Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAA 480729 |||| ||||| |||||||| ||| || || |||||||| | || ||| | Sbjct 820 CTTCTTTGTCCTGAATCTTAGCTTTAACGTTCTCGATAGTATCTGAAGGTTCGACTTCCA 879 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || ||||| || || | ||| || |||||||| || Sbjct 880 AGGTGATCGTTTTTCCAGTCAAAGTTTTCACGAAAATCTG 919 >seq119639 Length=3498 Score = 127 bits (140), Expect = 1e-23 Identities = 242/350 (69%), Gaps = 10/350 (3%) Strand=Plus/Minus Query 297322 GTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTT 297381 || || |||||||||||||||||||| |||||||| || | || | ||||| || ||| Sbjct 2570 GTCTTTGATTGTTGGTTTGAATCAGGATCTATGCCATACGCACAGTTCCATTACCCATTT 2511 Query 297382 GAAAATTCCGAAATTTTAGACACTTCACAAGATTATATT-GCAGATTTTATAACAGAATC 297440 || || | ||| ||| || || | ||| | ||| ||||||| | ||| Sbjct 2510 GAGAA---CAAAAA---AGAGT-TTGACGATATTTTTCCAGCAAATTTTATTGCTGAAGG 2458 Query 297441 AATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAA 297500 |||||||||||| || |||||||||||||| | | ||||| || |||||| | || || Sbjct 2457 AATTGATCAAACTAGGGGTTGGTTTTATACCCTGATGGTTCTGTCAACAGCTTTGTTCAA 2398 Query 297501 CAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAA 297560 ||| | | ||||| ||| | || | | || | || ||| | ||||||||||| Sbjct 2397 TAAAGCGCCGTTTAAGAATCTTATAGCCAATGGTTTAATTCTGGCATCGGATGGACAAAA 2338 Query 297561 AATGTCAAAAAGTAAAGGTAATTATCCTGATCCAAAT-ATTTTGATGGATAAATATGGTG 297619 ||||| ||| | ||| || ||||| ||||| | | ||| | |||||||||| | Sbjct 2337 GATGTCTAAACGAAAAAAGAACTATCCAGATCCTCTTGAAATTG-TTAATAAATATGGCG 2279 Query 297620 CAGATACTTTACGTCTTTATTTATTATCAACACCTGTAGTTAAAGCCGAA 297669 | ||| |||| | || || || || | |||||||| || || ||| Sbjct 2278 CTGATGCTTTGAGGCTGTACCTAATAAATTCTCCTGTAGTGAAGGCGGAA 2229 >seq68900 Length=4702 Score = 123 bits (136), Expect = 2e-22 Identities = 126/162 (78%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159 || |||||||||||||| ||||| || || |||||| | ||||| || ||||| || || Sbjct 3771 GACTTTTCATCTCCAAACATTGCTAAAGAGATGCATGTAGGACATTTAAGATCAACCATT 3712 Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATG-TGAAGTACAAAGAATAAA 817218 ||||| || | ||||| ||| | |||||||| || | ||| |||| ||||| || Sbjct 3711 ATTGGAGATAGTATTTGTCGAACACTTGAATTTT-TGAACCATGACGTACTTAGAATCAA 3653 Query 817219 TCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 817260 ||| | ||||| |||||||| || ||||||||||||||||| Sbjct 3652 CCATCTGGGTGACTGGGGAACTCAGTTTGGTATGTTAATTGC 3611 >seq193007 Length=659 Score = 120 bits (132), Expect = 2e-21 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| || | || | |||| |||||| | ||| || || | ||| || Sbjct 409 ACGGAGGCGGAGAACCAAGTGCAATGTAGATTCTTTCTGGATATTGTAGTCGGATAGTGT 468 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||||||||| ||||||||||| |||||||| ||||| || || ||||| || Sbjct 469 GCGTCCATCTTCAAGTTGTTTTCCAGCAAAGATAAGACGCTGTTGGTCTGGGGGAATACC 528 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||| ||||||||||| || ||||||| |||||||| || | || | ||| | Sbjct 529 TTCTTTGTCTTGAATTTTGGCTTTGACATTCTCAATAGTGTCCGATGGTTCAACTTCTAA 588 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || |||||||| || || || ||||| || || || || Sbjct 589 AGTGATAGTTTTGCCAGTAAGTGTCTTGACAAAGATCTG 627 >seq15021 Length=1916 Score = 96.9 bits (106), Expect = 2e-14 Identities = 111/148 (75%), Gaps = 1/148 (1%) Strand=Plus/Minus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||| ||||| ||| |||||| || ||| ||||||| || || | | ||||| | Sbjct 934 CAAG-TGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAAAGTGTGCGGCCGTCTTCCA 876 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 ||| || |||||||| || | |||||||||||||||||||| || || || ||||||| Sbjct 875 ATTGTTTACCAGCAAAGATCAATCGTTGTTGATCAGGAGGAATACCCTCTTTATCTTGAA 816 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATC 480712 |||| ||| ||| ||| ||||| || Sbjct 815 TCTTGGCTTTCACATTTTCTATAGTGTC 788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3257581469180324